RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 TMEM57Q8N5G2 664 aa6.14□□□□□ -1.43
PRKDC-208ENST00000536710 NGDNQ8NEJ9 315 aaKnown RBP6.14□□□□□ -1.43
PRKDC-208ENST00000536710 ASB12Q8WXK4 309 aa6.14□□□□□ -1.43
PRKDC-208ENST00000536710 RSPRY1Q96DX4 576 aa6.14□□□□□ -1.43
PRKDC-208ENST00000536710 REXO5Q96IC2 774 aaKnown RBP6.14□□□□□ -1.43
PRKDC-208ENST00000536710 MPP4Q96JB8 637 aa6.14□□□□□ -1.43
PRKDC-208ENST00000536710 MECRQ9BV79 373 aa6.14□□□□□ -1.43
PRKDC-208ENST00000536710 SERHL2Q9H4I8 314 aa6.14□□□□□ -1.43
PRKDC-208ENST00000536710 GGA3Q9NZ52 723 aa6.14□□□□□ -1.43
PRKDC-208ENST00000536710 KCND3Q9UK17 655 aa6.14□□□□□ -1.43
PRKDC-208ENST00000536710 PCDHB7Q9Y5E2 793 aa6.14□□□□□ -1.43
PRKDC-208ENST00000536710 PIPSLA2A3N6 862 aa6.13□□□□□ -1.43
PRKDC-208ENST00000536710 EPB41L2O43491 1005 aaKnown RBP6.13□□□□□ -1.43
PRKDC-208ENST00000536710 CA12O43570 354 aa6.13□□□□□ -1.43
PRKDC-208ENST00000536710 PMPCBO75439 489 aa6.13□□□□□ -1.43
PRKDC-208ENST00000536710 LARGE1O95461 756 aa6.13□□□□□ -1.43
PRKDC-208ENST00000536710 PEX11BO96011 259 aa6.13□□□□□ -1.43
PRKDC-208ENST00000536710 TK1P04183 234 aa6.13□□□□□ -1.43
PRKDC-208ENST00000536710 EGR2P11161 476 aaPredicted RBP6.13□□□□□ -1.43
PRKDC-208ENST00000536710 XBP1P17861 261 aa6.13□□□□□ -1.43
PRKDC-208ENST00000536710 THBS4P35443 961 aa6.13□□□□□ -1.43
PRKDC-208ENST00000536710 E2F1Q01094 437 aa6.13□□□□□ -1.43
PRKDC-208ENST00000536710 G3BP1Q13283 466 aaKnown RBP eCLIP6.13□□□□□ -1.433e-7■■■□□ 15.7
PRKDC-208ENST00000536710 PDCLQ13371 301 aa6.13□□□□□ -1.43
PRKDC-208ENST00000536710 FZD5Q13467 585 aa6.13□□□□□ -1.43
PRKDC-208ENST00000536710 PTPRRQ15256 657 aa6.13□□□□□ -1.43
PRKDC-208ENST00000536710 TRIM60Q495X7 471 aa6.13□□□□□ -1.43
PRKDC-208ENST00000536710 GALNTL6Q49A17 601 aa6.13□□□□□ -1.43
PRKDC-208ENST00000536710 TTC22Q5TAA0 569 aa6.13□□□□□ -1.43
PRKDC-208ENST00000536710 ANKRD40Q6AI12 368 aa6.13□□□□□ -1.43
PRKDC-208ENST00000536710 GRHL2Q6ISB3 625 aa6.13□□□□□ -1.43
PRKDC-208ENST00000536710 SYNE3Q6ZMZ3 975 aa6.13□□□□□ -1.43
PRKDC-208ENST00000536710 ESX1Q8N693 406 aa6.13□□□□□ -1.43
PRKDC-208ENST00000536710 SIRT6Q8N6T7 355 aa6.13□□□□□ -1.43
PRKDC-208ENST00000536710 NAXEQ8NCW5 288 aa6.13□□□□□ -1.43
PRKDC-208ENST00000536710 IL17REQ8NFR9 667 aa6.13□□□□□ -1.43
PRKDC-208ENST00000536710 CACTINQ8WUQ7 758 aaKnown RBP6.13□□□□□ -1.43
PRKDC-208ENST00000536710 LENG9Q96B70 501 aa6.13□□□□□ -1.43
PRKDC-208ENST00000536710 SDCCAG3Q96C92 435 aa6.13□□□□□ -1.43
PRKDC-208ENST00000536710 WDYHV1Q96HA8 205 aa6.13□□□□□ -1.43
PRKDC-208ENST00000536710 MAELQ96JY0 434 aaKnown RBP6.13□□□□□ -1.43
PRKDC-208ENST00000536710 PBKQ96KB5 322 aa6.13□□□□□ -1.43
PRKDC-208ENST00000536710 PRR25Q96S07 402 aa6.13□□□□□ -1.43
PRKDC-208ENST00000536710 MLST8Q9BVC4 326 aa6.13□□□□□ -1.43
PRKDC-208ENST00000536710 PRDM16Q9HAZ2 1276 aa6.13□□□□□ -1.43
PRKDC-208ENST00000536710 LIN7CQ9NUP9 197 aaKnown RBP6.13□□□□□ -1.43
PRKDC-208ENST00000536710 ZNF69Q9UC07 566 aa6.13□□□□□ -1.43
PRKDC-208ENST00000536710 GJD2Q9UKL4 321 aa6.13□□□□□ -1.43
PRKDC-208ENST00000536710 RRP7AQ9Y3A4 280 aaKnown RBP6.13□□□□□ -1.43
PRKDC-208ENST00000536710 A8MVJ9 347 aa6.12□□□□□ -1.43
PRKDC-208ENST00000536710 HMGB1P1B2RPK0 211 aaPredicted RBP6.12□□□□□ -1.43
PRKDC-208ENST00000536710 EYA2O00167 538 aa6.12□□□□□ -1.43
PRKDC-208ENST00000536710 CTIFO43310 598 aaKnown RBP6.12□□□□□ -1.43
PRKDC-208ENST00000536710 SPRY2O43597 315 aa6.12□□□□□ -1.43
PRKDC-208ENST00000536710 DLDP09622 509 aaKnown RBP6.12□□□□□ -1.43
PRKDC-208ENST00000536710 ALADP13716 330 aa6.12□□□□□ -1.43
PRKDC-208ENST00000536710 ZNF37AP17032 561 aaPredicted RBP6.12□□□□□ -1.43
PRKDC-208ENST00000536710 FOLR3P41439 243 aa6.12□□□□□ -1.43
PRKDC-208ENST00000536710 PTPAQ15257 358 aa6.12□□□□□ -1.43
PRKDC-208ENST00000536710 CYP1B1Q16678 543 aa6.12□□□□□ -1.43
PRKDC-208ENST00000536710 TXNRD1Q16881 649 aa6.12□□□□□ -1.43
PRKDC-208ENST00000536710 AASDHQ4L235 1098 aaPredicted RBP6.12□□□□□ -1.43
PRKDC-208ENST00000536710 PLAC9Q5JTB6 97 aa6.12□□□□□ -1.43
PRKDC-208ENST00000536710 KAZNQ674X7 775 aa6.12□□□□□ -1.43
PRKDC-208ENST00000536710 RINLQ6ZS11 566 aa6.12□□□□□ -1.43
PRKDC-208ENST00000536710 CPOQ8IVL8 374 aa6.12□□□□□ -1.43
PRKDC-208ENST00000536710 SEC62Q99442 399 aaKnown RBP6.12□□□□□ -1.43
PRKDC-208ENST00000536710 GOLGA2P5Q9HBQ8 144 aa6.12□□□□□ -1.43
PRKDC-208ENST00000536710 ARHGEF3Q9NR81 526 aa6.12□□□□□ -1.43
PRKDC-208ENST00000536710 MGAT4CQ9UBM8 478 aa6.12□□□□□ -1.43
PRKDC-208ENST00000536710 BAG5Q9UL15 447 aa6.12□□□□□ -1.43
PRKDC-208ENST00000536710 SH2B3Q9UQQ2 575 aa6.12□□□□□ -1.43
PRKDC-208ENST00000536710 PCDHB2Q9Y5E7 798 aa6.12□□□□□ -1.43
PRKDC-208ENST00000536710 FER1L4A9Z1Z3 1794 aa6.11□□□□□ -1.43
PRKDC-208ENST00000536710 A0A1B0GVC2 190 aa6.11□□□□□ -1.43
PRKDC-208ENST00000536710 MPPED1O15442 326 aa6.11□□□□□ -1.43
PRKDC-208ENST00000536710 NDUFB7P17568 137 aa6.11□□□□□ -1.43
PRKDC-208ENST00000536710 ENGP17813 658 aa6.11□□□□□ -1.43
PRKDC-208ENST00000536710 ADRA1DP25100 572 aa6.11□□□□□ -1.43
PRKDC-208ENST00000536710 SEC24CP53992 1094 aa6.11□□□□□ -1.43
PRKDC-208ENST00000536710 TRPC3Q13507 836 aa6.11□□□□□ -1.43
PRKDC-208ENST00000536710 CBFBQ13951 182 aa6.11□□□□□ -1.43
PRKDC-208ENST00000536710 DLGAP5Q15398 846 aa6.11□□□□□ -1.43
PRKDC-208ENST00000536710 Q6ZNX1 250 aa6.11□□□□□ -1.43
PRKDC-208ENST00000536710 PARS2Q7L3T8 475 aaKnown RBP6.11□□□□□ -1.43
PRKDC-208ENST00000536710 MRGPREQ86SM8 312 aa6.11□□□□□ -1.43
PRKDC-208ENST00000536710 SIMC1Q8NDZ2 872 aa6.11□□□□□ -1.43
PRKDC-208ENST00000536710 SH3RF3Q8TEJ3 882 aaPredicted RBP6.11□□□□□ -1.43
PRKDC-208ENST00000536710 OVCA2Q8WZ82 227 aa6.11□□□□□ -1.43
PRKDC-208ENST00000536710 RFKQ969G6 155 aa6.11□□□□□ -1.43
PRKDC-208ENST00000536710 PPM1MQ96MI6 270 aa6.11□□□□□ -1.43
PRKDC-208ENST00000536710 KRTAP3-1Q9BYR8 98 aa6.11□□□□□ -1.43
PRKDC-208ENST00000536710 NOD2Q9HC29 1040 aa6.11□□□□□ -1.43
PRKDC-208ENST00000536710 G6PC2Q9NQR9 355 aa6.11□□□□□ -1.43
PRKDC-208ENST00000536710 RAPGEFL1Q9UHV5 662 aa6.11□□□□□ -1.43
PRKDC-208ENST00000536710 ASAP1Q9ULH1 1129 aa6.11□□□□□ -1.43
PRKDC-208ENST00000536710 VPS4AQ9UN37 437 aa6.11□□□□□ -1.43
PRKDC-208ENST00000536710 DERAQ9Y315 318 aa6.11□□□□□ -1.43
PRKDC-208ENST00000536710 UBE2J1Q9Y385 318 aaPredicted RBP6.11□□□□□ -1.43
PRKDC-208ENST00000536710 SLC38A8A6NNN8 435 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms