RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 GGA3Q9NZ52 723 aa6.57□□□□□ -1.36
CLIP1-207ENST00000536634 KLHL42Q9P2K6 505 aa6.57□□□□□ -1.36
CLIP1-207ENST00000536634 SCAF8Q9UPN6 1271 aaKnown RBP6.57□□□□□ -1.36
CLIP1-207ENST00000536634 DDX60Q8IY21 1712 aaKnown RBP6.56□□□□□ -1.36
CLIP1-207ENST00000536634 A6NNZ2 444 aa6.56□□□□□ -1.36
CLIP1-207ENST00000536634 GRPP07492 148 aa6.56□□□□□ -1.36
CLIP1-207ENST00000536634 MYL6BP14649 208 aa6.56□□□□□ -1.36
CLIP1-207ENST00000536634 ITGALP20701 1170 aa6.56□□□□□ -1.36
CLIP1-207ENST00000536634 PRKAR2BP31323 418 aa6.56□□□□□ -1.36
CLIP1-207ENST00000536634 MAPK10P53779 464 aa6.56□□□□□ -1.36
CLIP1-207ENST00000536634 MLC1Q15049 377 aa6.56□□□□□ -1.36
CLIP1-207ENST00000536634 MINDY4Q4G0A6 757 aa6.56□□□□□ -1.36
CLIP1-207ENST00000536634 ANO6Q4KMQ2 910 aa6.56□□□□□ -1.36
CLIP1-207ENST00000536634 ZNF362Q5T0B9 420 aaPredicted RBP6.56□□□□□ -1.36
CLIP1-207ENST00000536634 CC2D1BQ5T0F9 858 aaKnown RBP6.56□□□□□ -1.36
CLIP1-207ENST00000536634 KIF6Q6ZMV9 814 aa6.56□□□□□ -1.36
CLIP1-207ENST00000536634 DCPSQ96C86 337 aaKnown RBP6.56□□□□□ -1.36
CLIP1-207ENST00000536634 PGBD1Q96JS3 809 aa6.56□□□□□ -1.36
CLIP1-207ENST00000536634 OSBPL9Q96SU4 736 aa6.56□□□□□ -1.36
CLIP1-207ENST00000536634 HEPHQ9BQS7 1158 aa6.56□□□□□ -1.36
CLIP1-207ENST00000536634 TPSD1Q9BZJ3 242 aa6.56□□□□□ -1.36
CLIP1-207ENST00000536634 AMBRA1Q9C0C7 1298 aa6.56□□□□□ -1.36
CLIP1-207ENST00000536634 ATP6V0A4Q9HBG4 840 aa6.56□□□□□ -1.36
CLIP1-207ENST00000536634 DDX20Q9UHI6 824 aaKnown RBP6.56□□□□□ -1.36
CLIP1-207ENST00000536634 TCEAL9Q9UHQ7 104 aa6.56□□□□□ -1.36
CLIP1-207ENST00000536634 MED16Q9Y2X0 877 aa6.56□□□□□ -1.36
CLIP1-207ENST00000536634 RRP7AQ9Y3A4 280 aaKnown RBP6.56□□□□□ -1.36
CLIP1-207ENST00000536634 ADGRA2Q96PE1 1338 aa6.55□□□□□ -1.36
CLIP1-207ENST00000536634 MPPED1O15442 326 aa6.55□□□□□ -1.36
CLIP1-207ENST00000536634 TRIAP1O43715 76 aa6.55□□□□□ -1.36
CLIP1-207ENST00000536634 ELFN1P0C7U0 828 aa6.55□□□□□ -1.36
CLIP1-207ENST00000536634 KITP10721 976 aa6.55□□□□□ -1.36
CLIP1-207ENST00000536634 CD6P30203 668 aa6.55□□□□□ -1.36
CLIP1-207ENST00000536634 RARRES1P49788 294 aa6.55□□□□□ -1.36
CLIP1-207ENST00000536634 SLC10A5Q5PT55 438 aa6.55□□□□□ -1.36
CLIP1-207ENST00000536634 TMEM108Q6UXF1 575 aa6.55□□□□□ -1.36
CLIP1-207ENST00000536634 PEG10Q86TG7 708 aaKnown RBP6.55□□□□□ -1.36
CLIP1-207ENST00000536634 FAM109AQ8N4B1 249 aa6.55□□□□□ -1.36
CLIP1-207ENST00000536634 SPATA5L1Q9BVQ7 753 aa6.55□□□□□ -1.36
CLIP1-207ENST00000536634 ACTRT3Q9BYD9 372 aa6.55□□□□□ -1.36
CLIP1-207ENST00000536634 TMX4Q9H1E5 349 aaPredicted RBP6.55□□□□□ -1.36
CLIP1-207ENST00000536634 CNNM1Q9NRU3 951 aa6.55□□□□□ -1.36
CLIP1-207ENST00000536634 PLEKHM1Q9Y4G2 1056 aa6.55□□□□□ -1.36
CLIP1-207ENST00000536634 DLG5Q8TDM6 1919 aa6.54□□□□□ -1.36
CLIP1-207ENST00000536634 WDR27A2RRH5 827 aa6.54□□□□□ -1.36
CLIP1-207ENST00000536634 UBE2Q2LH0YL09 131 aa6.54□□□□□ -1.36
CLIP1-207ENST00000536634 ECE2O60344 883 aa6.54□□□□□ -1.36
CLIP1-207ENST00000536634 SOAT2O75908 522 aa6.54□□□□□ -1.36
CLIP1-207ENST00000536634 BBOX1O75936 387 aa6.54□□□□□ -1.36
CLIP1-207ENST00000536634 PDHA1P08559 390 aa6.54□□□□□ -1.36
CLIP1-207ENST00000536634 U2AF1L5P0DN76 240 aaPredicted RBP6.54□□□□□ -1.36
CLIP1-207ENST00000536634 EN2P19622 333 aaPredicted RBP6.54□□□□□ -1.36
CLIP1-207ENST00000536634 TM4SF4P48230 202 aa6.54□□□□□ -1.36
CLIP1-207ENST00000536634 U2AF1Q01081 240 aaKnown RBP eCLIP6.54□□□□□ -1.36
CLIP1-207ENST00000536634 ITIH3Q06033 890 aa6.54□□□□□ -1.36
CLIP1-207ENST00000536634 GRAPQ13588 217 aa6.54□□□□□ -1.36
CLIP1-207ENST00000536634 PTPRRQ15256 657 aa6.54□□□□□ -1.36
CLIP1-207ENST00000536634 ERCC6LQ2NKX8 1250 aa6.54□□□□□ -1.36
CLIP1-207ENST00000536634 LONRF3Q496Y0 759 aa6.54□□□□□ -1.36
CLIP1-207ENST00000536634 KAZNQ674X7 775 aa6.54□□□□□ -1.36
CLIP1-207ENST00000536634 PPP1R42Q7Z4L9 355 aa6.54□□□□□ -1.36
CLIP1-207ENST00000536634 GRAPLQ8TC17 118 aaPredicted RBP6.54□□□□□ -1.36
CLIP1-207ENST00000536634 UTP14AQ9BVJ6 771 aaKnown RBP6.54□□□□□ -1.36
CLIP1-207ENST00000536634 TRIM54Q9BYV2 358 aa6.54□□□□□ -1.36
CLIP1-207ENST00000536634 TMEM60Q9H2L4 133 aa6.54□□□□□ -1.36
CLIP1-207ENST00000536634 SERHLQ9NQF3 203 aa6.54□□□□□ -1.36
CLIP1-207ENST00000536634 PIH1D1Q9NWS0 290 aaKnown RBP6.54□□□□□ -1.36
CLIP1-207ENST00000536634 POLLQ9UGP5 575 aa6.54□□□□□ -1.36
CLIP1-207ENST00000536634 TLK1Q9UKI8 766 aa6.54□□□□□ -1.36
CLIP1-207ENST00000536634 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.54□□□□□ -1.36
CLIP1-207ENST00000536634 PSME4Q14997 1843 aa6.54□□□□□ -1.36
CLIP1-207ENST00000536634 A0A1W2PPL8 197 aa6.53□□□□□ -1.36
CLIP1-207ENST00000536634 OVOL3O00110 214 aa6.53□□□□□ -1.36
CLIP1-207ENST00000536634 RPS12P25398 132 aaKnown RBP6.53□□□□□ -1.36
CLIP1-207ENST00000536634 ARFIP2P53365 341 aa6.53□□□□□ -1.36
CLIP1-207ENST00000536634 UCP3P55916 312 aa6.53□□□□□ -1.36
CLIP1-207ENST00000536634 NXPH1P58417 271 aa6.53□□□□□ -1.36
CLIP1-207ENST00000536634 LILRA4P59901 499 aa6.53□□□□□ -1.36
CLIP1-207ENST00000536634 GPSM2P81274 684 aa6.53□□□□□ -1.36
CLIP1-207ENST00000536634 LLGL1Q15334 1064 aa6.53□□□□□ -1.36
CLIP1-207ENST00000536634 PROSER3Q2NL68 480 aa6.53□□□□□ -1.36
CLIP1-207ENST00000536634 ARHGAP29Q52LW3 1261 aa6.53□□□□□ -1.36
CLIP1-207ENST00000536634 PARP10Q53GL7 1025 aa6.53□□□□□ -1.36
CLIP1-207ENST00000536634 PRIMA1Q86XR5 153 aa6.53□□□□□ -1.36
CLIP1-207ENST00000536634 KIAA0319LQ8IZA0 1049 aa6.53□□□□□ -1.36
CLIP1-207ENST00000536634 MYO1HQ8N1T3 1032 aa6.53□□□□□ -1.36
CLIP1-207ENST00000536634 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.53□□□□□ -1.36
CLIP1-207ENST00000536634 FAM98AQ8NCA5 519 aaKnown RBP6.53□□□□□ -1.36
CLIP1-207ENST00000536634 CAGE1Q8TC20 777 aa6.53□□□□□ -1.36
CLIP1-207ENST00000536634 FAM136AQ96C01 138 aa6.53□□□□□ -1.36
CLIP1-207ENST00000536634 THUMPD2Q9BTF0 503 aaKnown RBP6.53□□□□□ -1.36
CLIP1-207ENST00000536634 DUSP26Q9BV47 211 aa6.53□□□□□ -1.36
CLIP1-207ENST00000536634 KIAA1586Q9HCI6 787 aa6.53□□□□□ -1.36
CLIP1-207ENST00000536634 IL17RBQ9NRM6 502 aa6.53□□□□□ -1.36
CLIP1-207ENST00000536634 C1orf112Q9NSG2 853 aa6.53□□□□□ -1.36
CLIP1-207ENST00000536634 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.53□□□□□ -1.36
CLIP1-207ENST00000536634 XPR1Q9UBH6 696 aa6.53□□□□□ -1.36
CLIP1-207ENST00000536634 DKK3Q9UBP4 350 aa6.53□□□□□ -1.36
CLIP1-207ENST00000536634 TRIM17Q9Y577 477 aa6.53□□□□□ -1.36
CLIP1-207ENST00000536634 INSL6Q9Y581 213 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms