RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 DENND1BQ6P3S1 775 aa13.31□□□□□ -0.28
DDB1-207ENST00000535967 NOP9Q86U38 636 aaKnown RBP13.31□□□□□ -0.28
DDB1-207ENST00000535967 MON1AQ86VX9 555 aa13.31□□□□□ -0.28
DDB1-207ENST00000535967 SIX6OS1Q8N1H7 587 aa13.31□□□□□ -0.28
DDB1-207ENST00000535967 ZSCAN18Q8TBC5 510 aaPredicted RBP13.31□□□□□ -0.28
DDB1-207ENST00000535967 DDX1Q92499 740 aaKnown RBP13.31□□□□□ -0.28
DDB1-207ENST00000535967 SMARCD2Q92925 531 aa13.31□□□□□ -0.28
DDB1-207ENST00000535967 E2F7Q96AV8 911 aa13.31□□□□□ -0.28
DDB1-207ENST00000535967 MCRS1Q96EZ8 462 aa13.31□□□□□ -0.28
DDB1-207ENST00000535967 DDX23Q9BUQ8 820 aaKnown RBP13.31□□□□□ -0.28
DDB1-207ENST00000535967 KIF9Q9HAQ2 790 aa13.31□□□□□ -0.28
DDB1-207ENST00000535967 CNGB3Q9NQW8 809 aa13.31□□□□□ -0.28
DDB1-207ENST00000535967 TRAV19A0A0A6YYK7 116 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 ZNF840PA6NDX5 716 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 LRRC53A6NM62 1247 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 TULP2O00295 520 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 SART1O43290 800 aaKnown RBP13.3□□□□□ -0.28
DDB1-207ENST00000535967 ECI2O75521 394 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 FBXO21O94952 628 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 OLFM2O95897 454 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 ZBED1O96006 694 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 OAS1P00973 400 aaKnown RBP13.3□□□□□ -0.28
DDB1-207ENST00000535967 FCARP24071 287 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 AVPR1AP37288 418 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 SNX16P57768 344 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 CDR2Q01850 454 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 PDCLQ13371 301 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 ZNF268Q14587 947 aaPredicted RBP13.3□□□□□ -0.28
DDB1-207ENST00000535967 PUM1Q14671 1186 aaKnown RBP eCLIP13.3□□□□□ -0.284e-6■□□□□ 8.5
DDB1-207ENST00000535967 STXBP5Q5T5C0 1151 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 SPECC1LQ69YQ0 1117 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 PM20D1Q6GTS8 502 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 PMF1Q6P1K2 205 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 ZC3H14Q6PJT7 736 aaKnown RBP13.3□□□□□ -0.28
DDB1-207ENST00000535967 TRIM72Q6ZMU5 477 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 LAPTM4BQ86VI4 370 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 CMTM8Q8IZV2 173 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 TMEM35BQ8NCS4 154 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 ZNF397Q8NF99 534 aaPredicted RBP13.3□□□□□ -0.28
DDB1-207ENST00000535967 IRGQQ8WZA9 623 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 ELSPBP1Q96BH3 223 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 KXD1Q9BQD3 176 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 PDCL3Q9H2J4 239 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 OBP2AQ9NY56 170 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 GMIPQ9P107 970 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 USP24Q9UPU5 2620 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 KANSL1LA0AUZ9 987 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 USP17L7P0C7H9 530 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 ZBED6P86452 979 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 MLF2Q15773 248 aaPredicted RBP13.3□□□□□ -0.28
DDB1-207ENST00000535967 ASIC2Q16515 512 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 RSPO4Q2I0M5 234 aaPredicted RBP13.3□□□□□ -0.28
DDB1-207ENST00000535967 FAM78AQ5JUQ0 283 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 SFMBT2Q5VUG0 894 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 TXNDC8Q6A555 127 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 TADA2BQ86TJ2 420 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 PASD1Q8IV76 773 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 VSTM4Q8IW00 320 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 ZNF276Q8N554 614 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 MAB21L3Q8N8X9 362 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 MSANTD4Q8NCY6 345 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 IPO4Q8TEX9 1081 aaKnown RBP13.3□□□□□ -0.28
DDB1-207ENST00000535967 ZFRQ96KR1 1074 aaKnown RBP13.3□□□□□ -0.28
DDB1-207ENST00000535967 ZSWIM3Q96MP5 696 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 CDK5RAP1Q96SZ6 601 aaKnown RBP13.3□□□□□ -0.28
DDB1-207ENST00000535967 SLC46A2Q9BY10 475 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 ULBP1Q9BZM6 244 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 TRIM5Q9C035 493 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 ZFP14Q9HCL3 533 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 TRPC7Q9HCX4 862 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 SPATA6Q9NWH7 488 aaPredicted RBP13.3□□□□□ -0.28
DDB1-207ENST00000535967 CLIC5Q9NZA1 410 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 AIPL1Q9NZN9 384 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 CAPN11Q9UMQ6 739 aa13.3□□□□□ -0.28
DDB1-207ENST00000535967 C2orf78A6NCI8 922 aa13.29□□□□□ -0.28
DDB1-207ENST00000535967 SHISA7A6NL88 538 aa13.29□□□□□ -0.28
DDB1-207ENST00000535967 GYPCP04921 128 aa13.29□□□□□ -0.28
DDB1-207ENST00000535967 CKMP06732 381 aa13.29□□□□□ -0.28
DDB1-207ENST00000535967 MMEP08473 750 aa13.29□□□□□ -0.28
DDB1-207ENST00000535967 TPM1P09493 284 aa13.29□□□□□ -0.28
DDB1-207ENST00000535967 TCF3P15923 654 aa13.29□□□□□ -0.28
DDB1-207ENST00000535967 PRKCIP41743 596 aa13.29□□□□□ -0.28
DDB1-207ENST00000535967 RGS7P49802 495 aa13.29□□□□□ -0.28
DDB1-207ENST00000535967 DAOAP59103 153 aa13.29□□□□□ -0.28
DDB1-207ENST00000535967 UBXN2BQ14CS0 331 aa13.29□□□□□ -0.28
DDB1-207ENST00000535967 SLC44A4Q53GD3 710 aa13.29□□□□□ -0.28
DDB1-207ENST00000535967 HECTD3Q5T447 861 aa13.29□□□□□ -0.28
DDB1-207ENST00000535967 TAF3Q5VWG9 929 aa13.29□□□□□ -0.28
DDB1-207ENST00000535967 ARID3BQ8IVW6 561 aaPredicted RBP13.29□□□□□ -0.28
DDB1-207ENST00000535967 C1orf131Q8NDD1 294 aaKnown RBP13.29□□□□□ -0.28
DDB1-207ENST00000535967 SLC20A1Q8WUM9 679 aa13.29□□□□□ -0.28
DDB1-207ENST00000535967 DEPDC1BQ8WUY9 529 aa13.29□□□□□ -0.28
DDB1-207ENST00000535967 SYN2Q92777 582 aaPredicted RBP13.29□□□□□ -0.28
DDB1-207ENST00000535967 TRIM62Q9BVG3 475 aa13.29□□□□□ -0.28
DDB1-207ENST00000535967 ST7Q9NRC1 585 aa13.29□□□□□ -0.28
DDB1-207ENST00000535967 CYTH4Q9UIA0 394 aa13.29□□□□□ -0.28
DDB1-207ENST00000535967 NAGPAQ9UK23 515 aa13.29□□□□□ -0.28
DDB1-207ENST00000535967 LUC7L2Q9Y383 392 aaKnown RBP13.29□□□□□ -0.28
DDB1-207ENST00000535967 SDK1Q7Z5N4 2213 aa13.28□□□□□ -0.28
DDB1-207ENST00000535967 A0A1W2PQH9 124 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms