RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 EIF2DP41214 584 aaKnown RBP10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 PIK3CAP42336 1068 aa10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 GCLMP48507 274 aa10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 ORC1Q13415 861 aa10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 HECTD3Q5T447 861 aa10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 CLEC20AQ6ZU45 233 aa10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 SYT12Q8IV01 421 aa10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 FAM186BQ8IYM0 893 aa10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 SMYD4Q8IYR2 804 aaPredicted RBP10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 TMEFF1Q8IYR6 380 aa10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 SLC2A14Q8TDB8 520 aa10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 USP33Q8TEY7 942 aa10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 MED10Q9BTT4 135 aa10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 CCSER2Q9H7U1 834 aa10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 TMEM8AQ9HCN3 771 aa10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 PNPLA8Q9NP80 782 aa10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 KRT82Q9NSB4 513 aa10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 TMEM74BQ9NUR3 256 aa10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 GMIPQ9P107 970 aa10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 TBC1D14Q9P2M4 693 aa10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 SHROOM3Q8TF72 1996 aa10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 PLXND1Q9Y4D7 1925 aa10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 ATXN2Q99700 1313 aaKnown RBP10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 NAV2Q8IVL1 2488 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 PLXNB3Q9ULL4 1909 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 OPHN1O60890 802 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 ABL1P00519 1130 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 MBL2P11226 248 aaPredicted RBP10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 KRT13P13646 458 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 PRCPP42785 496 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 PTGER3P43115 390 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 SLC6A11P48066 632 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 MAP3K7CLP57077 242 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 MESP2Q0VG99 397 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 IFRD2Q12894 506 aaPredicted RBP10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 PNOCQ13519 176 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 C2orf27AQ580R0 203 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 KRT39Q6A163 491 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 SLC23A3Q6PIS1 610 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 GPRIN1Q7Z2K8 1008 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 C12orf40Q86WS4 652 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 PHTF2Q8N3S3 785 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 PNPLA1Q8N8W4 532 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 TTC16Q8NEE8 873 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 MDGA1Q8NFP4 955 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 RLN3Q8WXF3 142 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 SEMA4DQ92854 862 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 WBP2Q969T9 261 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 OTUB2Q96DC9 234 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 CYFIP2Q96F07 1278 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 CNOT6LQ96LI5 555 aaKnown RBP10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 GSDMAQ96QA5 445 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 NT5C1AQ9BXI3 368 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 FBXO44Q9H4M3 255 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 OSER1Q9NX31 292 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 SMPD4Q9NXE4 827 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 CACNA2D2Q9NY47 1150 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 CFAP97Q9P2B7 532 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 SCML2Q9UQR0 700 aa10.63□□□□□ -0.71
CLSTN3-203ENST00000534830 CYSRT1A8MQ03 144 aa10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 FAM200BP0CF97 657 aa10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 SEC13P55735 322 aa10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 GFPT1Q06210 699 aaPredicted RBP10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 HNRNPDQ14103 355 aaKnown RBP10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 TRIP6Q15654 476 aaKnown RBP10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 PPP1R26Q5T8A7 1209 aaPredicted RBP10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 ZNF658Q5TYW1 1059 aaPredicted RBP10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 LYSMD4Q5XG99 296 aa10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 CCNI2Q6ZMN8 369 aaPredicted RBP10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 HTR3DQ70Z44 454 aa10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 RASSF3Q86WH2 238 aa10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 SFTPA1Q8IWL2 248 aa10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 ETFBKMTQ8IXQ9 262 aa10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 ELOA2Q8IYF1 753 aaPredicted RBP10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 ZNF276Q8N554 614 aa10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 CCDC33Q8N5R6 958 aa10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 CCDC26Q8TAB7 109 aa10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 SPACA7Q96KW9 195 aa10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 TIGD1Q96MW7 591 aa10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 CAMK1GQ96NX5 476 aa10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 KLF16Q9BXK1 252 aaPredicted RBP10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 NIF3L1Q9GZT8 377 aa10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 FAM124BQ9H5Z6 455 aaPredicted RBP10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 SCUBE2Q9NQ36 999 aa10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 CYLDQ9NQC7 956 aa10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 TLR8Q9NR97 1041 aaKnown RBP10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 FAM49BQ9NUQ9 324 aa10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 COQ4Q9Y3A0 265 aa10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 PCDHB9Q9Y5E1 797 aa10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 USP3Q9Y6I4 520 aa10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 TNRC6BQ9UPQ9 1833 aaKnown RBP10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 CEP192Q8TEP8 1941 aa10.62□□□□□ -0.71
CLSTN3-203ENST00000534830 CETN3O15182 167 aa10.61□□□□□ -0.71
CLSTN3-203ENST00000534830 HOXC11O43248 304 aaPredicted RBP10.61□□□□□ -0.71
CLSTN3-203ENST00000534830 TLR5O60602 858 aa10.61□□□□□ -0.71
CLSTN3-203ENST00000534830 ALDH1A2O94788 518 aa10.61□□□□□ -0.71
CLSTN3-203ENST00000534830 TBX18O95935 607 aa10.61□□□□□ -0.71
CLSTN3-203ENST00000534830 ADH5P11766 374 aa10.61□□□□□ -0.71
CLSTN3-203ENST00000534830 ITPKAP23677 461 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms