RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 SPATA17Q96L03 361 aa11.24□□□□□ -0.61
CSDE1-215ENST00000533818 SLC6A18Q96N87 628 aa11.24□□□□□ -0.61
CSDE1-215ENST00000533818 AIFM3Q96NN9 605 aa11.24□□□□□ -0.61
CSDE1-215ENST00000533818 CCSER1Q9C0I3 900 aa11.24□□□□□ -0.61
CSDE1-215ENST00000533818 HAPLN2Q9GZV7 340 aa11.24□□□□□ -0.61
CSDE1-215ENST00000533818 BTBD1Q9H0C5 482 aa11.24□□□□□ -0.61
CSDE1-215ENST00000533818 WDR35Q9P2L0 1181 aa11.24□□□□□ -0.61
CSDE1-215ENST00000533818 PLAAQ9Y263 795 aa11.24□□□□□ -0.61
CSDE1-215ENST00000533818 ANAPC1Q9H1A4 1944 aa11.24□□□□□ -0.61
CSDE1-215ENST00000533818 BSNQ9UPA5 3926 aa11.24□□□□□ -0.61
CSDE1-215ENST00000533818 A0A1W2PNU3 283 aaPredicted RBP11.23□□□□□ -0.61
CSDE1-215ENST00000533818 CDRT15L2A8MXV6 281 aa11.23□□□□□ -0.61
CSDE1-215ENST00000533818 KPNA7A9QM74 516 aa11.23□□□□□ -0.61
CSDE1-215ENST00000533818 SLC16A4O15374 487 aa11.23□□□□□ -0.61
CSDE1-215ENST00000533818 CYP26A1O43174 497 aa11.23□□□□□ -0.61
CSDE1-215ENST00000533818 SIGLEC6O43699 453 aa11.23□□□□□ -0.61
CSDE1-215ENST00000533818 AGFG2O95081 481 aa11.23□□□□□ -0.61
CSDE1-215ENST00000533818 DEXIO95424 95 aa11.23□□□□□ -0.61
CSDE1-215ENST00000533818 CISD3P0C7P0 127 aa11.23□□□□□ -0.61
CSDE1-215ENST00000533818 MAGEA11P43364 429 aa11.23□□□□□ -0.61
CSDE1-215ENST00000533818 CDH8P55286 799 aa11.23□□□□□ -0.61
CSDE1-215ENST00000533818 ENPP2Q13822 863 aa11.23□□□□□ -0.61
CSDE1-215ENST00000533818 KYAT1Q16773 422 aa11.23□□□□□ -0.61
CSDE1-215ENST00000533818 CCDC142Q17RM4 750 aa11.23□□□□□ -0.61
CSDE1-215ENST00000533818 ZPBP2Q6X784 338 aa11.23□□□□□ -0.61
CSDE1-215ENST00000533818 Q6ZUG5 572 aa11.23□□□□□ -0.61
CSDE1-215ENST00000533818 DENND5BQ6ZUT9 1274 aa11.23□□□□□ -0.61
CSDE1-215ENST00000533818 FUBP3Q96I24 572 aaKnown RBP eCLIP11.23□□□□□ -0.61
CSDE1-215ENST00000533818 PKMYT1Q99640 499 aa11.23□□□□□ -0.61
CSDE1-215ENST00000533818 TTLL2Q9BWV7 592 aa11.23□□□□□ -0.61
CSDE1-215ENST00000533818 ABCG4Q9H172 646 aa11.23□□□□□ -0.61
CSDE1-215ENST00000533818 OSBPL2Q9H1P3 480 aa11.23□□□□□ -0.61
CSDE1-215ENST00000533818 LHX5Q9H2C1 402 aa11.23□□□□□ -0.61
CSDE1-215ENST00000533818 AASDHPPTQ9NRN7 309 aa11.23□□□□□ -0.61
CSDE1-215ENST00000533818 DDX43Q9NXZ2 648 aaKnown RBP11.23□□□□□ -0.61
CSDE1-215ENST00000533818 EHD2Q9NZN4 543 aa11.23□□□□□ -0.61
CSDE1-215ENST00000533818 THAP10Q9P2Z0 257 aaPredicted RBP11.23□□□□□ -0.61
CSDE1-215ENST00000533818 ZFHX3Q15911 3703 aa11.22□□□□□ -0.61
CSDE1-215ENST00000533818 VPS37CA5D8V6 355 aaPredicted RBP11.22□□□□□ -0.61
CSDE1-215ENST00000533818 TRIM38O00635 465 aa11.22□□□□□ -0.61
CSDE1-215ENST00000533818 IGHV4-34P06331 123 aa11.22□□□□□ -0.61
CSDE1-215ENST00000533818 ADRB2P07550 413 aa11.22□□□□□ -0.61
CSDE1-215ENST00000533818 HMGB1P09429 215 aaKnown RBP11.22□□□□□ -0.61
CSDE1-215ENST00000533818 CD38P28907 300 aa11.22□□□□□ -0.61
CSDE1-215ENST00000533818 RXRGP48443 463 aa11.22□□□□□ -0.61
CSDE1-215ENST00000533818 ZNF211Q13398 564 aaPredicted RBP11.22□□□□□ -0.61
CSDE1-215ENST00000533818 TMEM132DQ14C87 1099 aa11.22□□□□□ -0.61
CSDE1-215ENST00000533818 CLCA4Q14CN2 919 aa11.22□□□□□ -0.61
CSDE1-215ENST00000533818 ISXQ2M1V0 245 aa11.22□□□□□ -0.61
CSDE1-215ENST00000533818 FOXR1Q6PIV2 292 aa11.22□□□□□ -0.61
CSDE1-215ENST00000533818 TPGS1Q6ZTW0 290 aa11.22□□□□□ -0.61
CSDE1-215ENST00000533818 CD302Q8IX05 232 aa11.22□□□□□ -0.61
CSDE1-215ENST00000533818 PDCL2Q8N4E4 241 aa11.22□□□□□ -0.61
CSDE1-215ENST00000533818 ARL14Q8N4G2 192 aa11.22□□□□□ -0.61
CSDE1-215ENST00000533818 HPS3Q969F9 1004 aa11.22□□□□□ -0.61
CSDE1-215ENST00000533818 CEP295NLQ96MC4 621 aa11.22□□□□□ -0.61
CSDE1-215ENST00000533818 DUSP9Q99956 384 aaKnown RBP11.22□□□□□ -0.61
CSDE1-215ENST00000533818 BHMT2Q9H2M3 363 aa11.22□□□□□ -0.61
CSDE1-215ENST00000533818 ANO2Q9NQ90 1003 aa11.22□□□□□ -0.61
CSDE1-215ENST00000533818 ANAPC2Q9UJX6 822 aa11.22□□□□□ -0.61
CSDE1-215ENST00000533818 PCDHGA8Q9Y5G5 932 aa11.22□□□□□ -0.61
CSDE1-215ENST00000533818 PTPRJQ12913 1337 aa11.21□□□□□ -0.61
CSDE1-215ENST00000533818 A0A1W2PPC4 97 aa11.21□□□□□ -0.61
CSDE1-215ENST00000533818 A1L4Q6 167 aa11.21□□□□□ -0.61
CSDE1-215ENST00000533818 COCHO43405 550 aa11.21□□□□□ -0.61
CSDE1-215ENST00000533818 IGHDP01880 384 aa11.21□□□□□ -0.61
CSDE1-215ENST00000533818 EPHX1P07099 455 aa11.21□□□□□ -0.61
CSDE1-215ENST00000533818 CPA1P15085 419 aa11.21□□□□□ -0.61
CSDE1-215ENST00000533818 ACO1P21399 889 aaKnown RBP11.21□□□□□ -0.61
CSDE1-215ENST00000533818 ANXA13P27216 316 aa11.21□□□□□ -0.61
CSDE1-215ENST00000533818 TAF10Q12962 218 aa11.21□□□□□ -0.61
CSDE1-215ENST00000533818 SV2CQ496J9 727 aa11.21□□□□□ -0.61
CSDE1-215ENST00000533818 EARS2Q5JPH6 523 aaKnown RBP11.21□□□□□ -0.61
CSDE1-215ENST00000533818 KIAA0895LQ68EN5 471 aa11.21□□□□□ -0.61
CSDE1-215ENST00000533818 CLEC14AQ86T13 490 aa11.21□□□□□ -0.61
CSDE1-215ENST00000533818 ATCAYQ86WG3 371 aa11.21□□□□□ -0.61
CSDE1-215ENST00000533818 RASEFQ8IZ41 740 aa11.21□□□□□ -0.61
CSDE1-215ENST00000533818 DAW1Q8N136 415 aa11.21□□□□□ -0.61
CSDE1-215ENST00000533818 OR2T3Q8NH03 318 aa11.21□□□□□ -0.61
CSDE1-215ENST00000533818 UCMAQ8WVF2 138 aa11.21□□□□□ -0.61
CSDE1-215ENST00000533818 WBP2Q969T9 261 aa11.21□□□□□ -0.61
CSDE1-215ENST00000533818 ATXN7L3BQ96GX2 97 aa11.21□□□□□ -0.61
CSDE1-215ENST00000533818 PRR11Q96HE9 360 aaPredicted RBP11.21□□□□□ -0.61
CSDE1-215ENST00000533818 GZF1Q9H116 711 aaPredicted RBP11.21□□□□□ -0.61
CSDE1-215ENST00000533818 ADNPQ9H2P0 1102 aa11.21□□□□□ -0.61
CSDE1-215ENST00000533818 DPP3Q9NY33 737 aa11.21□□□□□ -0.61
CSDE1-215ENST00000533818 MAGEC2Q9UBF1 373 aaPredicted RBP11.21□□□□□ -0.61
CSDE1-215ENST00000533818 NUMA1Q14980 2115 aa11.21□□□□□ -0.62
CSDE1-215ENST00000533818 FAM47DPA6NHR8 397 aa11.2□□□□□ -0.62
CSDE1-215ENST00000533818 HIP1RO75146 1068 aa11.2□□□□□ -0.62
CSDE1-215ENST00000533818 TNFSF15O95150 251 aa11.2□□□□□ -0.62
CSDE1-215ENST00000533818 THEGLP0DJG4 465 aa11.2□□□□□ -0.62
CSDE1-215ENST00000533818 IRF1P10914 325 aa11.2□□□□□ -0.62
CSDE1-215ENST00000533818 PRKCHP24723 683 aa11.2□□□□□ -0.62
CSDE1-215ENST00000533818 COL8A1P27658 744 aa11.2□□□□□ -0.62
CSDE1-215ENST00000533818 RPA1P27694 616 aa11.2□□□□□ -0.62
CSDE1-215ENST00000533818 DCTP40126 519 aa11.2□□□□□ -0.62
CSDE1-215ENST00000533818 SRSF6Q13247 344 aaKnown RBP11.2□□□□□ -0.62
CSDE1-215ENST00000533818 KRT32Q14532 448 aa11.2□□□□□ -0.62
CSDE1-215ENST00000533818 ZNF234Q14588 700 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms