RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 MYCLP1P12525 358 aaPredicted RBP12.63□□□□□ -0.39
BDNF-218ENST00000533246 PCSK1P29120 753 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 HADHAP40939 763 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 MMRN1Q13201 1228 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 EFTUD2Q15029 972 aaKnown RBP eCLIP12.63□□□□□ -0.39
BDNF-218ENST00000533246 ANKRD20A8PQ5CZ79 823 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 BTNL9Q6UXG8 535 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 AGGF1Q8N302 714 aaeCLIP12.63□□□□□ -0.39
BDNF-218ENST00000533246 GALNT4Q8N4A0 578 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 C12orf29Q8N999 325 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 BSNDQ8WZ55 320 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 ULK4Q96C45 1275 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 PARK7Q99497 189 aaKnown RBP12.63□□□□□ -0.39
BDNF-218ENST00000533246 MAGEB5Q9BZ81 275 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 TTYH3Q9C0H2 523 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 DSEQ9UL01 958 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 ANKRD26Q9UPS8 1709 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 DCDC2CA8MYV0 355 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 TPST1O60507 370 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 PEX14O75381 377 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 TGFB3P10600 412 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 MAPTP10636 758 aaKnown RBP12.63□□□□□ -0.39
BDNF-218ENST00000533246 RBL1P28749 1068 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 BLMHQ13867 455 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 SV2CQ496J9 727 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 ANKRD20A4Q4UJ75 823 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 FBXO47Q5MNV8 452 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 TTC39BQ5VTQ0 682 aaPredicted RBP12.63□□□□□ -0.39
BDNF-218ENST00000533246 LRRC8EQ6NSJ5 796 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 MTHFD1LQ6UB35 978 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 NUP93Q8N1F7 819 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 RFWD2Q8NHY2 731 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 TRPM4Q8TD43 1214 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 DMAP1Q9NPF5 467 aaPredicted RBP12.63□□□□□ -0.39
BDNF-218ENST00000533246 GAS2O43903 313 aaKnown RBP12.63□□□□□ -0.39
BDNF-218ENST00000533246 SMNDC1O75940 238 aaKnown RBP eCLIP12.63□□□□□ -0.39
BDNF-218ENST00000533246 MICAL2O94851 1124 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 SEC24DO94855 1032 aaPredicted RBP12.63□□□□□ -0.39
BDNF-218ENST00000533246 LMNAP02545 664 aaKnown RBP12.63□□□□□ -0.39
BDNF-218ENST00000533246 ADORA2AP29274 412 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 CACNA2D1P54289 1103 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 AQP5P55064 265 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 MCL1Q07820 350 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 CAPSQ13938 189 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 ZACNQ401N2 412 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 ZCWPW2Q504Y3 356 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 GLB1LQ6UWU2 654 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 DNERQ8NFT8 737 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 NCLNQ969V3 563 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 ASIC4Q96FT7 647 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 HES6Q96HZ4 224 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 MTFR1LQ9H019 292 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 SLCO1B3Q9NPD5 702 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 AASDHPPTQ9NRN7 309 aa12.63□□□□□ -0.39
BDNF-218ENST00000533246 DNALI1O14645 258 aaPredicted RBP12.62□□□□□ -0.39
BDNF-218ENST00000533246 CYP2F1P24903 491 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 CSE1LP55060 971 aaKnown RBP12.62□□□□□ -0.39
BDNF-218ENST00000533246 C6orf10Q5SRN2 563 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 NIPA1Q7RTP0 329 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 SLFN11Q7Z7L1 901 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 URGCPQ8TCY9 931 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 SLC2A14Q8TDB8 520 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 ADARB2Q9NS39 739 aaKnown RBP12.62□□□□□ -0.39
BDNF-218ENST00000533246 ARHGEF38Q9NXL2 777 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 V9GYQ6 96 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 CST3P01034 146 aaPredicted RBP12.62□□□□□ -0.39
BDNF-218ENST00000533246 IRF1P10914 325 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 NQO1P15559 274 aaKnown RBP12.62□□□□□ -0.39
BDNF-218ENST00000533246 EPHX2P34913 555 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 ADGRF2Q8IZF7 708 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 TTC30BQ8N4P2 665 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 LRRC15Q8TF66 581 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 NSL1Q96IY1 281 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 MRIQ9BWK5 157 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 ZNF518BQ9C0D4 1074 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 NEUROG2Q9H2A3 272 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 EURLQ9NYK6 297 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 TMCO1Q9UM00 188 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 MON2Q7Z3U7 1717 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 TRAPPC3O43617 180 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 HMGCRP04035 888 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 HSPA8P11142 646 aaKnown RBP12.62□□□□□ -0.39
BDNF-218ENST00000533246 ACADSBP45954 432 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 TKTL1P51854 596 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 TGFB2P61812 414 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 ADIGQ0VDE8 80 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 FAAP100Q0VG06 881 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 TWF1Q12792 350 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 AUHQ13825 339 aaKnown RBP12.62□□□□□ -0.39
BDNF-218ENST00000533246 ZNF484Q5JVG2 852 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 ZPBP2Q6X784 338 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 PCDH9Q9HC56 1237 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 TRPC7Q9HCX4 862 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 PDGFCQ9NRA1 345 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.62□□□□□ -0.39
BDNF-218ENST00000533246 AJAP1Q9UKB5 411 aaPredicted RBP12.62□□□□□ -0.39
BDNF-218ENST00000533246 BARX2Q9UMQ3 279 aaPredicted RBP12.62□□□□□ -0.39
BDNF-218ENST00000533246 COG5Q9UP83 839 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 PPME1Q9Y570 386 aa12.62□□□□□ -0.39
BDNF-218ENST00000533246 RRN3P2A6NIE6 340 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms