RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 LY6G5CQ5SRR4 150 aa16.11■□□□□ 0.17
CPSF1-210ENST00000532935 BSPRYQ5W0U4 402 aa16.11■□□□□ 0.17
CPSF1-210ENST00000532935 BTBD8Q5XKL5 378 aa16.11■□□□□ 0.17
CPSF1-210ENST00000532935 SMYD5Q6GMV2 418 aa16.11■□□□□ 0.17
CPSF1-210ENST00000532935 DENND1BQ6P3S1 775 aa16.11■□□□□ 0.17
CPSF1-210ENST00000532935 TSSK4Q6SA08 328 aa16.11■□□□□ 0.17
CPSF1-210ENST00000532935 MARCH2Q9P0N8 246 aa16.11■□□□□ 0.17
CPSF1-210ENST00000532935 R4GN57 208 aa16.11■□□□□ 0.17
CPSF1-210ENST00000532935 MYO18AQ92614 2054 aaKnown RBP16.1■□□□□ 0.17
CPSF1-210ENST00000532935 RNF40O75150 1001 aa16.1■□□□□ 0.17
CPSF1-210ENST00000532935 HMBSP08397 361 aa16.1■□□□□ 0.17
CPSF1-210ENST00000532935 TDGF1P13385 188 aa16.1■□□□□ 0.17
CPSF1-210ENST00000532935 GAD2Q05329 585 aa16.1■□□□□ 0.17
CPSF1-210ENST00000532935 FBXO43Q4G163 708 aa16.1■□□□□ 0.17
CPSF1-210ENST00000532935 CAVIN1Q6NZI2 390 aaKnown RBP16.1■□□□□ 0.17
CPSF1-210ENST00000532935 ZC3H14Q6PJT7 736 aaKnown RBP16.1■□□□□ 0.17
CPSF1-210ENST00000532935 Q6ZNB5 142 aa16.1■□□□□ 0.17
CPSF1-210ENST00000532935 IRGQQ8WZA9 623 aa16.1■□□□□ 0.17
CPSF1-210ENST00000532935 EZH1Q92800 747 aaPredicted RBP16.1■□□□□ 0.17
CPSF1-210ENST00000532935 VPS16Q9H269 839 aa16.1■□□□□ 0.17
CPSF1-210ENST00000532935 SPHK2Q9NRA0 654 aa16.1■□□□□ 0.17
CPSF1-210ENST00000532935 OLA1Q9NTK5 396 aaKnown RBP16.1■□□□□ 0.17
CPSF1-210ENST00000532935 C2orf42Q9NWW7 574 aa16.1■□□□□ 0.17
CPSF1-210ENST00000532935 STRIP2Q9ULQ0 834 aa16.1■□□□□ 0.17
CPSF1-210ENST00000532935 SLC12A8A0AV02 714 aa16.09■□□□□ 0.17
CPSF1-210ENST00000532935 FOXN3O00409 490 aaPredicted RBP16.09■□□□□ 0.17
CPSF1-210ENST00000532935 HOXC11O43248 304 aaPredicted RBP16.09■□□□□ 0.17
CPSF1-210ENST00000532935 FBXO21O94952 628 aa16.09■□□□□ 0.17
CPSF1-210ENST00000532935 PAPSS2O95340 614 aaPredicted RBP16.09■□□□□ 0.17
CPSF1-210ENST00000532935 TPM2P07951 284 aa16.09■□□□□ 0.17
CPSF1-210ENST00000532935 EIF2DP41214 584 aaKnown RBP16.09■□□□□ 0.17
CPSF1-210ENST00000532935 SLC6A11P48066 632 aa16.09■□□□□ 0.17
CPSF1-210ENST00000532935 RPL34P49207 117 aaKnown RBP16.09■□□□□ 0.17
CPSF1-210ENST00000532935 PTK2Q05397 1052 aa16.09■□□□□ 0.17
CPSF1-210ENST00000532935 KLHDC7AQ5VTJ3 777 aa16.09■□□□□ 0.17
CPSF1-210ENST00000532935 PKN3Q6P5Z2 889 aa16.09■□□□□ 0.17
CPSF1-210ENST00000532935 C12orf40Q86WS4 652 aa16.09■□□□□ 0.17
CPSF1-210ENST00000532935 TMEM25Q86YD3 366 aa16.09■□□□□ 0.17
CPSF1-210ENST00000532935 CLEC4CQ8WTT0 213 aa16.09■□□□□ 0.17
CPSF1-210ENST00000532935 STK32AQ8WU08 396 aa16.09■□□□□ 0.17
CPSF1-210ENST00000532935 RNF139Q8WU17 664 aa16.09■□□□□ 0.17
CPSF1-210ENST00000532935 EDEM1Q92611 657 aa16.09■□□□□ 0.17
CPSF1-210ENST00000532935 NELL1Q92832 810 aa16.09■□□□□ 0.17
CPSF1-210ENST00000532935 LSM14BQ9BX40 385 aaKnown RBP16.09■□□□□ 0.17
CPSF1-210ENST00000532935 FAM126AQ9BYI3 521 aaPredicted RBP16.09■□□□□ 0.17
CPSF1-210ENST00000532935 ST7Q9NRC1 585 aa16.09■□□□□ 0.17
CPSF1-210ENST00000532935 ABCC13Q9NSE7 274 aa16.09■□□□□ 0.17
CPSF1-210ENST00000532935 ZSCAN32Q9NX65 697 aa16.09■□□□□ 0.17
CPSF1-210ENST00000532935 FHOD1Q9Y613 1164 aa16.09■□□□□ 0.17
CPSF1-210ENST00000532935 EML5Q05BV3 1969 aa16.09■□□□□ 0.17
CPSF1-210ENST00000532935 ATG13O75143 517 aa16.08■□□□□ 0.16
CPSF1-210ENST00000532935 LTFP02788 710 aa16.08■□□□□ 0.16
CPSF1-210ENST00000532935 KLKB1P03952 638 aa16.08■□□□□ 0.16
CPSF1-210ENST00000532935 PNMA6AP0CW24 399 aaPredicted RBP16.08■□□□□ 0.16
CPSF1-210ENST00000532935 CORO1AP31146 461 aaKnown RBP16.08■□□□□ 0.16
CPSF1-210ENST00000532935 CLCN1P35523 988 aa16.08■□□□□ 0.16
CPSF1-210ENST00000532935 ACADSBP45954 432 aa16.08■□□□□ 0.16
CPSF1-210ENST00000532935 RAPGEF1Q13905 1077 aa16.08■□□□□ 0.16
CPSF1-210ENST00000532935 DRAP1Q14919 205 aaPredicted RBP16.08■□□□□ 0.16
CPSF1-210ENST00000532935 ANO4Q32M45 955 aa16.08■□□□□ 0.16
CPSF1-210ENST00000532935 FMNL3Q8IVF7 1028 aa16.08■□□□□ 0.16
CPSF1-210ENST00000532935 FAM71AQ8IYT1 594 aa16.08■□□□□ 0.16
CPSF1-210ENST00000532935 NKD2Q969F2 451 aaPredicted RBP16.08■□□□□ 0.16
CPSF1-210ENST00000532935 PNKPQ96T60 521 aa16.08■□□□□ 0.16
CPSF1-210ENST00000532935 NAA15Q9BXJ9 866 aaKnown RBP16.08■□□□□ 0.16
CPSF1-210ENST00000532935 SLC4A5Q9BY07 1137 aa16.08■□□□□ 0.16
CPSF1-210ENST00000532935 DCLK3Q9C098 648 aa16.08■□□□□ 0.16
CPSF1-210ENST00000532935 MIS12Q9H081 205 aa16.08■□□□□ 0.16
CPSF1-210ENST00000532935 CYTH4Q9UIA0 394 aa16.08■□□□□ 0.16
CPSF1-210ENST00000532935 ZNF510Q9Y2H8 683 aa16.08■□□□□ 0.16
CPSF1-210ENST00000532935 PCDHGA2Q9Y5H1 932 aa16.08■□□□□ 0.16
CPSF1-210ENST00000532935 RIF1Q5UIP0 2472 aaKnown RBP16.07■□□□□ 0.16
CPSF1-210ENST00000532935 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.07■□□□□ 0.16
CPSF1-210ENST00000532935 CHURC1-FNTBB4DL54 471 aa16.07■□□□□ 0.16
CPSF1-210ENST00000532935 K7EQS6 105 aa16.07■□□□□ 0.16
CPSF1-210ENST00000532935 K7ESF4 209 aa16.07■□□□□ 0.16
CPSF1-210ENST00000532935 GFRA3O60609 400 aa16.07■□□□□ 0.16
CPSF1-210ENST00000532935 UCHL3P15374 230 aa16.07■□□□□ 0.16
CPSF1-210ENST00000532935 ZNF18P17022 549 aa16.07■□□□□ 0.16
CPSF1-210ENST00000532935 COPB1P53618 953 aaKnown RBP16.07■□□□□ 0.16
CPSF1-210ENST00000532935 NRLP54845 237 aa16.07■□□□□ 0.16
CPSF1-210ENST00000532935 KDSRQ06136 332 aa16.07■□□□□ 0.16
CPSF1-210ENST00000532935 MESP2Q0VG99 397 aa16.07■□□□□ 0.16
CPSF1-210ENST00000532935 NCAPHQ15003 741 aa16.07■□□□□ 0.16
CPSF1-210ENST00000532935 ANO6Q4KMQ2 910 aa16.07■□□□□ 0.16
CPSF1-210ENST00000532935 FKBP15Q5T1M5 1219 aa16.07■□□□□ 0.16
CPSF1-210ENST00000532935 MSANTD2Q6P1R3 559 aa16.07■□□□□ 0.16
CPSF1-210ENST00000532935 TPGS1Q6ZTW0 290 aa16.07■□□□□ 0.16
CPSF1-210ENST00000532935 ASCL5Q7RTU5 278 aa16.07■□□□□ 0.16
CPSF1-210ENST00000532935 SLC47A2Q86VL8 602 aa16.07■□□□□ 0.16
CPSF1-210ENST00000532935 SCUBE3Q8IX30 993 aa16.07■□□□□ 0.16
CPSF1-210ENST00000532935 ETFBKMTQ8IXQ9 262 aa16.07■□□□□ 0.16
CPSF1-210ENST00000532935 AOPEPQ8N6M6 819 aa16.07■□□□□ 0.16
CPSF1-210ENST00000532935 NAT16Q8N8M0 369 aa16.07■□□□□ 0.16
CPSF1-210ENST00000532935 ZBTB44Q8NCP5 570 aa16.07■□□□□ 0.16
CPSF1-210ENST00000532935 ANKRD20A12PQ8NF67 263 aa16.07■□□□□ 0.16
CPSF1-210ENST00000532935 RPLP0P6Q8NHW5 317 aa16.07■□□□□ 0.16
CPSF1-210ENST00000532935 ATRIPQ8WXE1 791 aa16.07■□□□□ 0.16
CPSF1-210ENST00000532935 GOLGA1Q92805 767 aa16.07■□□□□ 0.16
CPSF1-210ENST00000532935 PLD4Q96BZ4 506 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms