RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-222	ENST00000531967	ERP44	Q9BS26	406 aa		5.51	□□□□□ -1.53
ECHDC1-222	ENST00000531967	MYL10	Q9BUA6	226 aa		5.51	□□□□□ -1.53
ECHDC1-222	ENST00000531967	HERC2P3	Q9BVR0	1158 aa		5.51	□□□□□ -1.53
ECHDC1-222	ENST00000531967	C1orf43	Q9BWL3	253 aa		5.51	□□□□□ -1.53
ECHDC1-222	ENST00000531967	PHF7	Q9BWX1	381 aa	Predicted RBP	5.51	□□□□□ -1.53
ECHDC1-222	ENST00000531967	TEX13A	Q9BXU3	409 aa	Predicted RBP	5.51	□□□□□ -1.53
ECHDC1-222	ENST00000531967	SLC5A7	Q9GZV3	580 aa		5.51	□□□□□ -1.53
ECHDC1-222	ENST00000531967	TAOK3	Q9H2K8	898 aa		5.51	□□□□□ -1.53
ECHDC1-222	ENST00000531967	MMRN2	Q9H8L6	949 aa		5.51	□□□□□ -1.53
ECHDC1-222	ENST00000531967	VEZT	Q9HBM0	779 aa		5.51	□□□□□ -1.53
ECHDC1-222	ENST00000531967	PCDHB16	Q9NRJ7	776 aa		5.51	□□□□□ -1.53
ECHDC1-222	ENST00000531967	KCNH7	Q9NS40	1196 aa		5.51	□□□□□ -1.53
ECHDC1-222	ENST00000531967	INTS13	Q9NVM9	706 aa		5.51	□□□□□ -1.53
ECHDC1-222	ENST00000531967	PRSS50	Q9UI38	385 aa		5.51	□□□□□ -1.53
ECHDC1-222	ENST00000531967	KCND3	Q9UK17	655 aa		5.51	□□□□□ -1.53
ECHDC1-222	ENST00000531967	CDY2A	Q9Y6F7	541 aa		5.51	□□□□□ -1.53
ECHDC1-222	ENST00000531967	SYNJ1	O43426	1573 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	MYO1G	B0I1T2	1018 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	MEIS1	O00470	390 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	PCDH17	O14917	1159 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	SPINT1	O43278	529 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	MATN4	O95460	622 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	PLG	P00747	810 aa	Predicted RBP	5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	CDH3	P22223	829 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	MAGEA8	P43361	318 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	ALDH18A1	P54886	795 aa	Known RBP	5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	CD83	Q01151	205 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	CHIT1	Q13231	466 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	MAN2A1	Q16706	1144 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	BTBD16	Q32M84	506 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	FIGN	Q5HY92	759 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	RNFT1	Q5M7Z0	435 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	METTL11B	Q5VVY1	283 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	SHE	Q5VZ18	495 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	RAP1GAP2	Q684P5	730 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	MBLAC2	Q68D91	279 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	FAM83A	Q86UY5	434 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	ARRDC4	Q8NCT1	418 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	HIPK4	Q8NE63	616 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	OR14C36	Q8NHC7	312 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	DNAJB8	Q8NHS0	232 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	SH3RF2	Q8TEC5	729 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	SLC13A3	Q8WWT9	602 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	RUFY1	Q96T51	708 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	TUBB6	Q9BUF5	446 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	GREM2	Q9H772	168 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	ABCB8	Q9NUT2	735 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	POLR3B	Q9NW08	1133 aa	Predicted RBP	5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	UBAP1	Q9NZ09	502 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	SRRD	Q9UH36	339 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	RIMKLB	Q9ULI2	386 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	MINPP1	Q9UNW1	487 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	CHKB	Q9Y259	395 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	ST20-MTHFS	A0A0A6YYL1	179 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967		O00370	1275 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	TSPAN4	O14817	238 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	CD3EAP	O15446	510 aa	Known RBP	5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	EIF4EBP3	O60516	100 aa	Predicted RBP	5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	APOL3	O95236	402 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	ALPP	P05187	535 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	POLR2M	P0CAP2	368 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	ALPPL2	P10696	532 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	SFPQ	P23246	707 aa	Known RBP eCLIP	5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	DNAJB1	P25685	340 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	ICAM3	P32942	547 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	PITPNB	P48739	271 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	WDR4	P57081	412 aa	Known RBP	5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	ZNF200	P98182	395 aa	Predicted RBP	5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	CYP4F8	P98187	520 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	ELP6	Q0PNE2	266 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	LSAMP	Q13449	338 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	TUBB2A	Q13885	445 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	ARHGEF6	Q15052	776 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	PKN1	Q16512	942 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	ETFRF1	Q6IPR1	90 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	PACS1	Q6VY07	963 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	LYSMD3	Q7Z3D4	306 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	DSG4	Q86SJ6	1040 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	MEIOB	Q8N635	442 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	DCBLD1	Q8N8Z6	715 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	SYT2	Q8N9I0	419 aa	Predicted RBP	5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	FAM181A	Q8N9Y4	354 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	RAPGEF5	Q92565	580 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	DTNBP1	Q96EV8	351 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	MRGPRX2	Q96LB1	330 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	ADAD1	Q96M93	576 aa	Known RBP	5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	FBXL18	Q96ME1	805 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	FCRL3	Q96P31	734 aa	Predicted RBP	5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	TUBB2B	Q9BVA1	445 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	B3GNT4	Q9C0J1	378 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	IQCG	Q9H095	443 aa	Known RBP	5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	SMG9	Q9H0W8	520 aa	Known RBP	5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	VPS16	Q9H269	839 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	5.5	□□□□□ -1.53	5e-12	■■■■■ 43.9
ECHDC1-222	ENST00000531967	TBC1D30	Q9Y2I9	924 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	KCNE2	Q9Y6J6	123 aa		5.5	□□□□□ -1.53
ECHDC1-222	ENST00000531967	OR6C76	A6NM76	312 aa		5.49	□□□□□ -1.53
ECHDC1-222	ENST00000531967	PYCARD-AS1	I3L0S3	204 aa		5.49	□□□□□ -1.53
ECHDC1-222	ENST00000531967	PRPF4	O43172	522 aa	Known RBP eCLIP	5.49	□□□□□ -1.53

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