RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 VSTM4Q8IW00 320 aa11.54□□□□□ -0.56
CAPN1-221ENST00000531068 PPM1KQ8N3J5 372 aa11.54□□□□□ -0.56
CAPN1-221ENST00000531068 LMO3Q8TAP4 145 aa11.54□□□□□ -0.56
CAPN1-221ENST00000531068 CNOT6LQ96LI5 555 aaKnown RBP11.54□□□□□ -0.56
CAPN1-221ENST00000531068 FAM81BQ96LP2 452 aa11.54□□□□□ -0.56
CAPN1-221ENST00000531068 NMUR1Q9HB89 426 aa11.54□□□□□ -0.56
CAPN1-221ENST00000531068 LRRC4Q9HBW1 653 aa11.54□□□□□ -0.56
CAPN1-221ENST00000531068 SPHK2Q9NRA0 654 aa11.54□□□□□ -0.56
CAPN1-221ENST00000531068 WDR35Q9P2L0 1181 aa11.54□□□□□ -0.56
CAPN1-221ENST00000531068 TSPAN16Q9UKR8 245 aa11.54□□□□□ -0.56
CAPN1-221ENST00000531068 STRIP2Q9ULQ0 834 aa11.54□□□□□ -0.56
CAPN1-221ENST00000531068 SMG5Q9UPR3 1016 aaKnown RBP11.54□□□□□ -0.56
CAPN1-221ENST00000531068 ZNF510Q9Y2H8 683 aa11.54□□□□□ -0.56
CAPN1-221ENST00000531068 A0A0A0MRY4 1105 aa11.53□□□□□ -0.56
CAPN1-221ENST00000531068 HOXC11O43248 304 aaPredicted RBP11.53□□□□□ -0.56
CAPN1-221ENST00000531068 CBFA2T2O43439 604 aa11.53□□□□□ -0.56
CAPN1-221ENST00000531068 APODP05090 189 aa11.53□□□□□ -0.56
CAPN1-221ENST00000531068 SETSIPP0DME0 302 aa11.53□□□□□ -0.56
CAPN1-221ENST00000531068 PRKCSHP14314 528 aaPredicted RBP11.53□□□□□ -0.56
CAPN1-221ENST00000531068 TNFRSF4P43489 277 aa11.53□□□□□ -0.56
CAPN1-221ENST00000531068 PGFP49763 221 aa11.53□□□□□ -0.56
CAPN1-221ENST00000531068 TKTL1P51854 596 aa11.53□□□□□ -0.56
CAPN1-221ENST00000531068 MRPS21P82921 87 aaKnown RBP11.53□□□□□ -0.56
CAPN1-221ENST00000531068 PDE4CQ08493 712 aa11.53□□□□□ -0.56
CAPN1-221ENST00000531068 ANO4Q32M45 955 aa11.53□□□□□ -0.56
CAPN1-221ENST00000531068 HSF5Q4G112 596 aaPredicted RBP11.53□□□□□ -0.56
CAPN1-221ENST00000531068 RAB41Q5JT25 222 aa11.53□□□□□ -0.56
CAPN1-221ENST00000531068 HEATR6Q6AI08 1181 aaKnown RBP11.53□□□□□ -0.56
CAPN1-221ENST00000531068 PM20D1Q6GTS8 502 aa11.53□□□□□ -0.56
CAPN1-221ENST00000531068 LCLAT1Q6UWP7 414 aa11.53□□□□□ -0.56
CAPN1-221ENST00000531068 RSRC2Q7L4I2 434 aaKnown RBP11.53□□□□□ -0.56
CAPN1-221ENST00000531068 ENOSF1Q7L5Y1 443 aa11.53□□□□□ -0.56
CAPN1-221ENST00000531068 SCD5Q86SK9 330 aa11.53□□□□□ -0.56
CAPN1-221ENST00000531068 TTC30AQ86WT1 665 aa11.53□□□□□ -0.56
CAPN1-221ENST00000531068 CREBRFQ8IUR6 639 aa11.53□□□□□ -0.56
CAPN1-221ENST00000531068 BBS7Q8IWZ6 715 aa11.53□□□□□ -0.56
CAPN1-221ENST00000531068 UBR7Q8N806 425 aa11.53□□□□□ -0.56
CAPN1-221ENST00000531068 RPLP0P6Q8NHW5 317 aa11.53□□□□□ -0.56
CAPN1-221ENST00000531068 KCTD13Q8WZ19 329 aa11.53□□□□□ -0.56
CAPN1-221ENST00000531068 TUBGCP2Q9BSJ2 902 aa11.53□□□□□ -0.56
CAPN1-221ENST00000531068 DCLK3Q9C098 648 aa11.53□□□□□ -0.56
CAPN1-221ENST00000531068 KCNF1Q9H3M0 494 aa11.53□□□□□ -0.56
CAPN1-221ENST00000531068 ARHGEF4Q9NR80 690 aa11.53□□□□□ -0.56
CAPN1-221ENST00000531068 OSER1Q9NX31 292 aa11.53□□□□□ -0.56
CAPN1-221ENST00000531068 TAB2Q9NYJ8 693 aa11.53□□□□□ -0.56
CAPN1-221ENST00000531068 DEC1Q9P2X7 70 aa11.53□□□□□ -0.56
CAPN1-221ENST00000531068 GMEB2Q9UKD1 530 aa11.53□□□□□ -0.56
CAPN1-221ENST00000531068 TBC1D3BA6NDS4 549 aa11.52□□□□□ -0.57
CAPN1-221ENST00000531068 K7EQS6 105 aa11.52□□□□□ -0.57
CAPN1-221ENST00000531068 O00370 1275 aa11.52□□□□□ -0.57
CAPN1-221ENST00000531068 SCAMP3O14828 347 aaKnown RBP11.52□□□□□ -0.57
CAPN1-221ENST00000531068 HRO43593 1189 aa11.52□□□□□ -0.57
CAPN1-221ENST00000531068 GREM1O60565 184 aa11.52□□□□□ -0.57
CAPN1-221ENST00000531068 KAT7O95251 611 aa11.52□□□□□ -0.57
CAPN1-221ENST00000531068 SERPINC1P01008 464 aa11.52□□□□□ -0.57
CAPN1-221ENST00000531068 IRF1P10914 325 aa11.52□□□□□ -0.57
CAPN1-221ENST00000531068 CDK11BP21127 795 aaKnown RBP11.52□□□□□ -0.57
CAPN1-221ENST00000531068 CHKAP35790 457 aa11.52□□□□□ -0.57
CAPN1-221ENST00000531068 SLC6A11P48066 632 aa11.52□□□□□ -0.57
CAPN1-221ENST00000531068 MFAP3P55082 362 aa11.52□□□□□ -0.57
CAPN1-221ENST00000531068 YWHAGP61981 247 aaKnown RBP eCLIP11.52□□□□□ -0.57
CAPN1-221ENST00000531068 DMC1Q14565 340 aa11.52□□□□□ -0.57
CAPN1-221ENST00000531068 GAB4Q2WGN9 574 aa11.52□□□□□ -0.57
CAPN1-221ENST00000531068 NAIF1Q69YI7 327 aaPredicted RBP11.52□□□□□ -0.57
CAPN1-221ENST00000531068 SMYD5Q6GMV2 418 aa11.52□□□□□ -0.57
CAPN1-221ENST00000531068 LAIR1Q6GTX8 287 aa11.52□□□□□ -0.57
CAPN1-221ENST00000531068 PKN3Q6P5Z2 889 aa11.52□□□□□ -0.57
CAPN1-221ENST00000531068 PRR23BQ6ZRT6 265 aa11.52□□□□□ -0.57
CAPN1-221ENST00000531068 CEP68Q76N32 757 aa11.52□□□□□ -0.57
CAPN1-221ENST00000531068 RRAGAQ7L523 313 aa11.52□□□□□ -0.57
CAPN1-221ENST00000531068 TMEM25Q86YD3 366 aa11.52□□□□□ -0.57
CAPN1-221ENST00000531068 FAM114A1Q8IWE2 563 aa11.52□□□□□ -0.57
CAPN1-221ENST00000531068 SIX6OS1Q8N1H7 587 aa11.52□□□□□ -0.57
CAPN1-221ENST00000531068 SCML4Q8N228 414 aa11.52□□□□□ -0.57
CAPN1-221ENST00000531068 UBA3Q8TBC4 463 aa11.52□□□□□ -0.57
CAPN1-221ENST00000531068 KCNV2Q8TDN2 545 aa11.52□□□□□ -0.57
CAPN1-221ENST00000531068 USP33Q8TEY7 942 aa11.52□□□□□ -0.57
CAPN1-221ENST00000531068 RNF139Q8WU17 664 aa11.52□□□□□ -0.57
CAPN1-221ENST00000531068 XPO6Q96QU8 1125 aaKnown RBP11.52□□□□□ -0.57
CAPN1-221ENST00000531068 ERGIC2Q96RQ1 377 aa11.52□□□□□ -0.57
CAPN1-221ENST00000531068 ULBP1Q9BZM6 244 aa11.52□□□□□ -0.57
CAPN1-221ENST00000531068 INTS2Q9H0H0 1204 aaKnown RBP11.52□□□□□ -0.57
CAPN1-221ENST00000531068 OLA1Q9NTK5 396 aaKnown RBP11.52□□□□□ -0.57
CAPN1-221ENST00000531068 C2orf42Q9NWW7 574 aa11.52□□□□□ -0.57
CAPN1-221ENST00000531068 A0A1W2PQC6 194 aa11.51□□□□□ -0.57
CAPN1-221ENST00000531068 DYNC1I1O14576 645 aa11.51□□□□□ -0.57
CAPN1-221ENST00000531068 APBB3O95704 486 aa11.51□□□□□ -0.57
CAPN1-221ENST00000531068 RETP07949 1114 aa11.51□□□□□ -0.57
CAPN1-221ENST00000531068 DGKEP52429 567 aa11.51□□□□□ -0.57
CAPN1-221ENST00000531068 DMWDQ09019 674 aa11.51□□□□□ -0.57
CAPN1-221ENST00000531068 EFEMP1Q12805 493 aa11.51□□□□□ -0.57
CAPN1-221ENST00000531068 MAN2A1Q16706 1144 aa11.51□□□□□ -0.57
CAPN1-221ENST00000531068 VWA3BQ502W6 1294 aa11.51□□□□□ -0.57
CAPN1-221ENST00000531068 C2orf27AQ580R0 203 aa11.51□□□□□ -0.57
CAPN1-221ENST00000531068 GBP6Q6ZN66 633 aa11.51□□□□□ -0.57
CAPN1-221ENST00000531068 TRMT11Q7Z4G4 463 aaKnown RBP11.51□□□□□ -0.57
CAPN1-221ENST00000531068 MIB1Q86YT6 1006 aa11.51□□□□□ -0.57
CAPN1-221ENST00000531068 LRRC8AQ8IWT6 810 aa11.51□□□□□ -0.57
CAPN1-221ENST00000531068 DRC7Q8IY82 874 aa11.51□□□□□ -0.57
CAPN1-221ENST00000531068 RBBP8NLQ8NC74 664 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms