RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 TNFAIP2Q03169 654 aa5.87□□□□□ -1.47
AMBRA1-209ENST00000529963 CSRP2Q16527 193 aa5.87□□□□□ -1.47
AMBRA1-209ENST00000529963 TSHZ3Q63HK5 1081 aa5.87□□□□□ -1.47
AMBRA1-209ENST00000529963 PDZD4Q76G19 769 aaPredicted RBP5.87□□□□□ -1.47
AMBRA1-209ENST00000529963 DRC7Q8IY82 874 aa5.87□□□□□ -1.47
AMBRA1-209ENST00000529963 PRR18Q8N4B5 295 aa5.87□□□□□ -1.47
AMBRA1-209ENST00000529963 RNF169Q8NCN4 708 aa5.87□□□□□ -1.47
AMBRA1-209ENST00000529963 PMM1Q92871 262 aa5.87□□□□□ -1.47
AMBRA1-209ENST00000529963 HPS3Q969F9 1004 aa5.87□□□□□ -1.47
AMBRA1-209ENST00000529963 MVB12AQ96EY5 273 aa5.87□□□□□ -1.47
AMBRA1-209ENST00000529963 C8orf49Q96NF6 230 aa5.87□□□□□ -1.47
AMBRA1-209ENST00000529963 DMRTA2Q96SC8 542 aa5.87□□□□□ -1.47
AMBRA1-209ENST00000529963 VRK1Q99986 396 aaPredicted RBP5.87□□□□□ -1.47
AMBRA1-209ENST00000529963 SEZ6LQ9BYH1 1024 aa5.87□□□□□ -1.47
AMBRA1-209ENST00000529963 DEF6Q9H4E7 631 aa5.87□□□□□ -1.47
AMBRA1-209ENST00000529963 DCTPP1Q9H773 170 aa5.87□□□□□ -1.47
AMBRA1-209ENST00000529963 RNF146Q9NTX7 359 aa5.87□□□□□ -1.47
AMBRA1-209ENST00000529963 TMEM140Q9NV12 185 aa5.87□□□□□ -1.47
AMBRA1-209ENST00000529963 TTC41PQ6P2S7 1318 aa5.86□□□□□ -1.47
AMBRA1-209ENST00000529963 CXorf49A8MYA2 514 aaPredicted RBP5.86□□□□□ -1.47
AMBRA1-209ENST00000529963 PLA2G6O60733 806 aa5.86□□□□□ -1.47
AMBRA1-209ENST00000529963 EIF5BO60841 1220 aaKnown RBP5.86□□□□□ -1.47
AMBRA1-209ENST00000529963 OFD1O75665 1012 aa5.86□□□□□ -1.47
AMBRA1-209ENST00000529963 EIF3JO75822 258 aaKnown RBP5.86□□□□□ -1.47
AMBRA1-209ENST00000529963 KRT18P05783 430 aaKnown RBP5.86□□□□□ -1.47
AMBRA1-209ENST00000529963 CSF2RAP15509 400 aa5.86□□□□□ -1.47
AMBRA1-209ENST00000529963 PTTG1IPP53801 180 aa5.86□□□□□ -1.47
AMBRA1-209ENST00000529963 CDC42EP1Q00587 391 aa5.86□□□□□ -1.47
AMBRA1-209ENST00000529963 CNTN2Q02246 1040 aa5.86□□□□□ -1.47
AMBRA1-209ENST00000529963 MTM1Q13496 603 aa5.86□□□□□ -1.47
AMBRA1-209ENST00000529963 RAB30Q15771 203 aa5.86□□□□□ -1.47
AMBRA1-209ENST00000529963 PGS1Q32NB8 556 aa5.86□□□□□ -1.47
AMBRA1-209ENST00000529963 C20orf194Q5TEA3 1177 aa5.86□□□□□ -1.47
AMBRA1-209ENST00000529963 ZNF365Q70YC5 407 aa5.86□□□□□ -1.47
AMBRA1-209ENST00000529963 TLK2Q86UE8 772 aa5.86□□□□□ -1.47
AMBRA1-209ENST00000529963 KRTAP1-3Q8IUG1 177 aa5.86□□□□□ -1.47
AMBRA1-209ENST00000529963 PALM2Q8IXS6 379 aa5.86□□□□□ -1.47
AMBRA1-209ENST00000529963 TCEAL8Q8IYN2 117 aa5.86□□□□□ -1.47
AMBRA1-209ENST00000529963 FAM133AQ8N9E0 248 aa5.86□□□□□ -1.47
AMBRA1-209ENST00000529963 ADOQ96SZ5 270 aa5.86□□□□□ -1.47
AMBRA1-209ENST00000529963 MAP3K14Q99558 947 aa5.86□□□□□ -1.47
AMBRA1-209ENST00000529963 FSD1Q9BTV5 496 aa5.86□□□□□ -1.47
AMBRA1-209ENST00000529963 MRI1Q9BV20 369 aa5.86□□□□□ -1.47
AMBRA1-209ENST00000529963 A1CFQ9NQ94 594 aaKnown RBP5.86□□□□□ -1.47
AMBRA1-209ENST00000529963 SLC23A1Q9UHI7 598 aa5.86□□□□□ -1.47
AMBRA1-209ENST00000529963 STX8Q9UNK0 236 aa5.86□□□□□ -1.47
AMBRA1-209ENST00000529963 MYH4Q9Y623 1939 aa5.85□□□□□ -1.47
AMBRA1-209ENST00000529963 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.85□□□□□ -1.47
AMBRA1-209ENST00000529963 TSPY2A6NKD2 308 aa5.85□□□□□ -1.47
AMBRA1-209ENST00000529963 CD4P01730 458 aa5.85□□□□□ -1.47
AMBRA1-209ENST00000529963 FGBP02675 491 aa5.85□□□□□ -1.47
AMBRA1-209ENST00000529963 ALAS1P13196 640 aa5.85□□□□□ -1.47
AMBRA1-209ENST00000529963 MCCP23508 829 aa5.85□□□□□ -1.47
AMBRA1-209ENST00000529963 CYP2C18P33260 490 aa5.85□□□□□ -1.47
AMBRA1-209ENST00000529963 BEX3Q00994 111 aa5.85□□□□□ -1.47
AMBRA1-209ENST00000529963 NHLH1Q02575 133 aa5.85□□□□□ -1.47
AMBRA1-209ENST00000529963 BIRC2Q13490 618 aa5.85□□□□□ -1.47
AMBRA1-209ENST00000529963 ITGA7Q13683 1181 aa5.85□□□□□ -1.47
AMBRA1-209ENST00000529963 KHDC1Q4VXA5 237 aaKnown RBP5.85□□□□□ -1.47
AMBRA1-209ENST00000529963 ATAT1Q5SQI0 421 aa5.85□□□□□ -1.47
AMBRA1-209ENST00000529963 B3GNT9Q6UX72 402 aa5.85□□□□□ -1.47
AMBRA1-209ENST00000529963 CXCL17Q6UXB2 119 aa5.85□□□□□ -1.47
AMBRA1-209ENST00000529963 Q6ZRM9 215 aa5.85□□□□□ -1.47
AMBRA1-209ENST00000529963 DCBLD1Q8N8Z6 715 aa5.85□□□□□ -1.47
AMBRA1-209ENST00000529963 PPP1R35Q8TAP8 253 aa5.85□□□□□ -1.47
AMBRA1-209ENST00000529963 IFI44Q8TCB0 444 aa5.85□□□□□ -1.47
AMBRA1-209ENST00000529963 HERVK_113Q902F9 699 aa5.85□□□□□ -1.47
AMBRA1-209ENST00000529963 ST8SIA2Q92186 375 aa5.85□□□□□ -1.47
AMBRA1-209ENST00000529963 MRGPRX4Q96LA9 322 aa5.85□□□□□ -1.47
AMBRA1-209ENST00000529963 HIPK3Q9H422 1215 aa5.85□□□□□ -1.47
AMBRA1-209ENST00000529963 EPHX3Q9H6B9 360 aa5.85□□□□□ -1.47
AMBRA1-209ENST00000529963 MSL2Q9HCI7 577 aa5.85□□□□□ -1.47
AMBRA1-209ENST00000529963 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.85□□□□□ -1.47
AMBRA1-209ENST00000529963 TCRBV7S2A1N4TA0A589 114 aa5.84□□□□□ -1.47
AMBRA1-209ENST00000529963 GRXCR1A8MXD5 290 aa5.84□□□□□ -1.47
AMBRA1-209ENST00000529963 CTAGE5O15320 804 aa5.84□□□□□ -1.47
AMBRA1-209ENST00000529963 DTNBO60941 627 aa5.84□□□□□ -1.47
AMBRA1-209ENST00000529963 ALDH2P05091 517 aa5.84□□□□□ -1.47
AMBRA1-209ENST00000529963 HHEXQ03014 270 aa5.84□□□□□ -1.47
AMBRA1-209ENST00000529963 SP140Q13342 867 aa5.84□□□□□ -1.47
AMBRA1-209ENST00000529963 HDAC1Q13547 482 aaPredicted RBP5.84□□□□□ -1.47
AMBRA1-209ENST00000529963 GTF2H3Q13889 308 aa5.84□□□□□ -1.47
AMBRA1-209ENST00000529963 CCDC96Q2M329 555 aa5.84□□□□□ -1.47
AMBRA1-209ENST00000529963 MAP9Q49MG5 647 aa5.84□□□□□ -1.47
AMBRA1-209ENST00000529963 FBXO16Q8IX29 292 aaPredicted RBP5.84□□□□□ -1.47
AMBRA1-209ENST00000529963 SMC5Q8IY18 1101 aa5.84□□□□□ -1.47
AMBRA1-209ENST00000529963 CAMKK1Q8N5S9 505 aa5.84□□□□□ -1.47
AMBRA1-209ENST00000529963 SLC35G2Q8TBE7 412 aa5.84□□□□□ -1.47
AMBRA1-209ENST00000529963 NSUN6Q8TEA1 469 aaKnown RBP5.84□□□□□ -1.47
AMBRA1-209ENST00000529963 CYFIP2Q96F07 1278 aa5.84□□□□□ -1.47
AMBRA1-209ENST00000529963 AIFM3Q96NN9 605 aa5.84□□□□□ -1.47
AMBRA1-209ENST00000529963 SAMD11Q96NU1 681 aa5.84□□□□□ -1.47
AMBRA1-209ENST00000529963 TAAR9Q96RI9 348 aa5.84□□□□□ -1.47
AMBRA1-209ENST00000529963 ACO2Q99798 780 aaKnown RBP5.84□□□□□ -1.47
AMBRA1-209ENST00000529963 SMPD4Q9NXE4 827 aa5.84□□□□□ -1.47
AMBRA1-209ENST00000529963 CYP39A1Q9NYL5 469 aa5.84□□□□□ -1.47
AMBRA1-209ENST00000529963 MOCS1Q9NZB8 636 aa5.84□□□□□ -1.47
AMBRA1-209ENST00000529963 ADD3Q9UEY8 706 aaKnown RBP5.84□□□□□ -1.47
AMBRA1-209ENST00000529963 CCPG1Q9ULG6 757 aa5.84□□□□□ -1.47
AMBRA1-209ENST00000529963 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms