RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 HPDLQ96IR7 371 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 SPATA17Q96L03 361 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 MRGPRX1Q96LB2 322 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 UBL7Q96S82 380 aaPredicted RBP3.75□□□□□ -1.81
PTPRC-213ENST00000529828 MMS19Q96T76 1030 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 MRPL45Q9BRJ2 306 aaKnown RBP3.75□□□□□ -1.81
PTPRC-213ENST00000529828 CBWD1Q9BRT8 395 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 TTLL2Q9BWV7 592 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 FGFBP2Q9BYJ0 223 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 NACA2Q9H009 215 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 CD248Q9HCU0 757 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 SPHK2Q9NRA0 654 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 PLK2Q9NYY3 685 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 GMIPQ9P107 970 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 SUSD2Q9UGT4 822 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 CHORDC1Q9UHD1 332 aaPredicted RBP3.75□□□□□ -1.81
PTPRC-213ENST00000529828 ITGA11Q9UKX5 1188 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 CDH9Q9ULB4 789 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 SH3BP1Q9Y3L3 701 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 RAI2Q9Y5P3 530 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 PLXND1Q9Y4D7 1925 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 RELNP78509 3460 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 A0A087WV48 116 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 A0A0A0MRY4 1105 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 A0A1B0GTW7 788 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 E2F8A0AVK6 867 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 KCNJ18B7U540 433 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 TRIM66O15016 1216 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 MDM4O15151 490 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 HOXC11O43248 304 aaPredicted RBP3.74□□□□□ -1.81
PTPRC-213ENST00000529828 ZNF217O75362 1048 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 TBX18O95935 607 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 KRT10P13645 584 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 CD6P30203 668 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 EIF2S3P41091 472 aaKnown RBP3.74□□□□□ -1.81
PTPRC-213ENST00000529828 UBA7P41226 1012 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 MATKP42679 507 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 CASP5P51878 434 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 RBP5P82980 135 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 SEMG2Q02383 582 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 CAMK2BQ13554 666 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 FUT11Q495W5 492 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 SLFN12LQ6IEE8 588 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 SDE2Q6IQ49 451 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 VSTM1Q6UX27 236 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 ZNF843Q8N446 348 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 ZSCAN1Q8NBB4 408 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 BAHD1Q8TBE0 780 aaPredicted RBP3.74□□□□□ -1.81
PTPRC-213ENST00000529828 SCFD1Q8WVM8 642 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 P2RY11Q96G91 374 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 CALML4Q96GE6 196 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 SLITRK1Q96PX8 696 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 BBS2Q9BXC9 721 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 MKRN2Q9H000 416 aaKnown RBP3.74□□□□□ -1.81
PTPRC-213ENST00000529828 FAM124BQ9H5Z6 455 aaPredicted RBP3.74□□□□□ -1.81
PTPRC-213ENST00000529828 GDAP2Q9NXN4 497 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 EIF2B4Q9UI10 523 aaKnown RBP3.74□□□□□ -1.81
PTPRC-213ENST00000529828 LIMCH1Q9UPQ0 1083 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 R3HCC1Q9Y3T6 440 aaKnown RBP3.74□□□□□ -1.81
PTPRC-213ENST00000529828 STYXL1Q9Y6J8 313 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 PTPN13Q12923 2485 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 CEP192Q8TEP8 1941 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 UNC79Q9P2D8 2635 aa3.74□□□□□ -1.81
PTPRC-213ENST00000529828 PTPRBP23467 1997 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 SPENQ96T58 3664 aaKnown RBP3.73□□□□□ -1.81
PTPRC-213ENST00000529828 BCAT2O15382 392 aaPredicted RBP3.73□□□□□ -1.81
PTPRC-213ENST00000529828 TLX3O43711 291 aaPredicted RBP3.73□□□□□ -1.81
PTPRC-213ENST00000529828 GCNT3O95395 438 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 CER1O95813 267 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 TYRP14679 529 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 WARSP23381 471 aaKnown RBP3.73□□□□□ -1.81
PTPRC-213ENST00000529828 YWHAQP27348 245 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 IL12RB1P42701 662 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 CSNK1EP49674 416 aaKnown RBP3.73□□□□□ -1.81
PTPRC-213ENST00000529828 SLC5A3P53794 718 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 NOP14P78316 857 aaKnown RBP3.73□□□□□ -1.81
PTPRC-213ENST00000529828 HMGN5P82970 282 aaKnown RBP3.73□□□□□ -1.81
PTPRC-213ENST00000529828 ORC1Q13415 861 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 KIF19Q2TAC6 998 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 PRAMEF14Q5SWL7 426 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 HECTD3Q5T447 861 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 SCARA5Q6ZMJ2 495 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 USP49Q70CQ1 688 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 ZNF720Q7Z2F6 126 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 GLRX5Q86SX6 157 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 ZNF605Q86T29 641 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 DDX42Q86XP3 938 aaKnown RBP eCLIP3.73□□□□□ -1.81
PTPRC-213ENST00000529828 NT5DC4Q86YG4 428 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 SYCP3Q8IZU3 236 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 OR6B3Q8NGW1 331 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 MYCBPAPQ8TBZ2 947 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 CACTINQ8WUQ7 758 aaKnown RBP3.73□□□□□ -1.81
PTPRC-213ENST00000529828 LARP4BQ92615 738 aaKnown RBP3.73□□□□□ -1.81
PTPRC-213ENST00000529828 FOXJ1Q92949 421 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 KCNN1Q92952 543 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 JAKMIP2Q96AA8 810 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 ANKRD36BP1Q96IX9 119 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 C8orf48Q96LL4 319 aa3.73□□□□□ -1.81
PTPRC-213ENST00000529828 FCRL3Q96P31 734 aaPredicted RBP3.73□□□□□ -1.81
PTPRC-213ENST00000529828 ACCSQ96QU6 501 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms