RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 PLA2G5P39877 138 aa5.68□□□□□ -1.5
CSDE1-212ENST00000529046 IL6STP40189 918 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-212ENST00000529046 MPLP40238 635 aa5.68□□□□□ -1.5
CSDE1-212ENST00000529046 NEK3P51956 506 aa5.68□□□□□ -1.5
CSDE1-212ENST00000529046 AK2P54819 239 aa5.68□□□□□ -1.5
CSDE1-212ENST00000529046 IFIT5Q13325 482 aaKnown RBP5.68□□□□□ -1.5
CSDE1-212ENST00000529046 SLC44A4Q53GD3 710 aa5.68□□□□□ -1.5
CSDE1-212ENST00000529046 PRR16Q569H4 304 aa5.68□□□□□ -1.5
CSDE1-212ENST00000529046 PPP4R4Q6NUP7 873 aa5.68□□□□□ -1.5
CSDE1-212ENST00000529046 ZNF790Q6PG37 636 aa5.68□□□□□ -1.5
CSDE1-212ENST00000529046 Q6ZNX1 250 aa5.68□□□□□ -1.5
CSDE1-212ENST00000529046 SAMD3Q8N6K7 520 aa5.68□□□□□ -1.5
CSDE1-212ENST00000529046 IL17REQ8NFR9 667 aa5.68□□□□□ -1.5
CSDE1-212ENST00000529046 SNX19Q92543 992 aa5.68□□□□□ -1.5
CSDE1-212ENST00000529046 NELL2Q99435 816 aa5.68□□□□□ -1.5
CSDE1-212ENST00000529046 SRP68Q9UHB9 627 aaKnown RBP5.68□□□□□ -1.5
CSDE1-212ENST00000529046 COL3A1P02461 1466 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-212ENST00000529046 BRCA1P38398 1863 aaKnown RBP5.68□□□□□ -1.5
CSDE1-212ENST00000529046 TJP1Q07157 1748 aa5.68□□□□□ -1.5
CSDE1-212ENST00000529046 NRXN2Q9P2S2 1712 aa5.68□□□□□ -1.5
CSDE1-212ENST00000529046 COL15A1P39059 1388 aa5.67□□□□□ -1.5
CSDE1-212ENST00000529046 ARFGEF1Q9Y6D6 1849 aa5.67□□□□□ -1.5
CSDE1-212ENST00000529046 A0A1W2PPC4 97 aa5.67□□□□□ -1.5
CSDE1-212ENST00000529046 WDR27A2RRH5 827 aa5.67□□□□□ -1.5
CSDE1-212ENST00000529046 TMEM233B4DJY2 109 aa5.67□□□□□ -1.5
CSDE1-212ENST00000529046 CCP110O43303 1012 aa5.67□□□□□ -1.5
CSDE1-212ENST00000529046 VPS4BO75351 444 aa5.67□□□□□ -1.5
CSDE1-212ENST00000529046 HMOX1P09601 288 aa5.67□□□□□ -1.5
CSDE1-212ENST00000529046 TXNP10599 105 aaKnown RBP5.67□□□□□ -1.5
CSDE1-212ENST00000529046 NPTX2P47972 431 aa5.67□□□□□ -1.5
CSDE1-212ENST00000529046 CLK3P49761 638 aaKnown RBP5.67□□□□□ -1.5
CSDE1-212ENST00000529046 NDUFV1P49821 464 aa5.67□□□□□ -1.5
CSDE1-212ENST00000529046 FPGSQ05932 587 aa5.67□□□□□ -1.5
CSDE1-212ENST00000529046 TEFQ10587 303 aa5.67□□□□□ -1.5
CSDE1-212ENST00000529046 SLC39A6Q13433 755 aa5.67□□□□□ -1.5
CSDE1-212ENST00000529046 CD300EQ496F6 205 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-212ENST00000529046 VWA1Q6PCB0 445 aa5.67□□□□□ -1.5
CSDE1-212ENST00000529046 CLEC4GQ6UXB4 293 aa5.67□□□□□ -1.5
CSDE1-212ENST00000529046 ADGRG3Q86Y34 549 aa5.67□□□□□ -1.5
CSDE1-212ENST00000529046 TTC5Q8N0Z6 440 aa5.67□□□□□ -1.5
CSDE1-212ENST00000529046 BRI3BPQ8WY22 251 aa5.67□□□□□ -1.5
CSDE1-212ENST00000529046 PTCD3Q96EY7 689 aaKnown RBP5.67□□□□□ -1.5
CSDE1-212ENST00000529046 TBCBQ99426 244 aa5.67□□□□□ -1.5
CSDE1-212ENST00000529046 PTDSS2Q9BVG9 487 aa5.67□□□□□ -1.5
CSDE1-212ENST00000529046 AMBRA1Q9C0C7 1298 aa5.67□□□□□ -1.5
CSDE1-212ENST00000529046 CHST8Q9H2A9 424 aa5.67□□□□□ -1.5
CSDE1-212ENST00000529046 STARD7Q9NQZ5 370 aa5.67□□□□□ -1.5
CSDE1-212ENST00000529046 SACM1LQ9NTJ5 587 aa5.67□□□□□ -1.5
CSDE1-212ENST00000529046 SHOC2Q9UQ13 582 aa5.67□□□□□ -1.5
CSDE1-212ENST00000529046 NUDCQ9Y266 331 aa5.67□□□□□ -1.5
CSDE1-212ENST00000529046 ZBTB1Q9Y2K1 713 aa5.67□□□□□ -1.5
CSDE1-212ENST00000529046 INSL6Q9Y581 213 aa5.67□□□□□ -1.5
CSDE1-212ENST00000529046 HEG1Q9ULI3 1381 aa5.67□□□□□ -1.5
CSDE1-212ENST00000529046 UBR2Q8IWV8 1755 aa5.66□□□□□ -1.5
CSDE1-212ENST00000529046 A0A0B4J269 797 aa5.66□□□□□ -1.5
CSDE1-212ENST00000529046 GLTPD2A6NH11 291 aa5.66□□□□□ -1.5
CSDE1-212ENST00000529046 CLCA1A8K7I4 914 aa5.66□□□□□ -1.5
CSDE1-212ENST00000529046 H0YIN7 160 aa5.66□□□□□ -1.5
CSDE1-212ENST00000529046 TOR1BO14657 336 aa5.66□□□□□ -1.5
CSDE1-212ENST00000529046 MT-ND5P03915 603 aa5.66□□□□□ -1.5
CSDE1-212ENST00000529046 ITGALP20701 1170 aa5.66□□□□□ -1.5
CSDE1-212ENST00000529046 LRPAP1P30533 357 aa5.66□□□□□ -1.5
CSDE1-212ENST00000529046 TUBB3Q13509 450 aa5.66□□□□□ -1.5
CSDE1-212ENST00000529046 HDAC1Q13547 482 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-212ENST00000529046 NPY5RQ15761 445 aa5.66□□□□□ -1.5
CSDE1-212ENST00000529046 ZIK1Q3SY52 487 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-212ENST00000529046 CC2D1BQ5T0F9 858 aaKnown RBP5.66□□□□□ -1.5
CSDE1-212ENST00000529046 SYCP2LQ5T4T6 812 aa5.66□□□□□ -1.5
CSDE1-212ENST00000529046 SFRP4Q6FHJ7 346 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-212ENST00000529046 SLC30A10Q6XR72 485 aa5.66□□□□□ -1.5
CSDE1-212ENST00000529046 TOGARAM2Q6ZUX3 1019 aa5.66□□□□□ -1.5
CSDE1-212ENST00000529046 OR2C3Q8N628 320 aa5.66□□□□□ -1.5
CSDE1-212ENST00000529046 SSH3Q8TE77 659 aa5.66□□□□□ -1.5
CSDE1-212ENST00000529046 SPSB4Q96A44 273 aa5.66□□□□□ -1.5
CSDE1-212ENST00000529046 TMEM125Q96AQ2 219 aa5.66□□□□□ -1.5
CSDE1-212ENST00000529046 SNX22Q96L94 193 aa5.66□□□□□ -1.5
CSDE1-212ENST00000529046 CFAP53Q96M91 514 aa5.66□□□□□ -1.5
CSDE1-212ENST00000529046 GDF15Q99988 308 aa5.66□□□□□ -1.5
CSDE1-212ENST00000529046 PNPLA8Q9NP80 782 aa5.66□□□□□ -1.5
CSDE1-212ENST00000529046 PTGFRNQ9P2B2 879 aa5.66□□□□□ -1.5
CSDE1-212ENST00000529046 MYO1AQ9UBC5 1043 aa5.66□□□□□ -1.5
CSDE1-212ENST00000529046 DMTF1Q9Y222 760 aa5.66□□□□□ -1.5
CSDE1-212ENST00000529046 N4BP2Q86UW6 1770 aaPredicted RBP5.65□□□□□ -1.5
CSDE1-212ENST00000529046 TRGV11A0A075B6L2 103 aa5.65□□□□□ -1.5
CSDE1-212ENST00000529046 MYO1CO00159 1063 aa5.65□□□□□ -1.5
CSDE1-212ENST00000529046 KPNA5O15131 536 aa5.65□□□□□ -1.5
CSDE1-212ENST00000529046 TRIAP1O43715 76 aa5.65□□□□□ -1.5
CSDE1-212ENST00000529046 FGF18O76093 207 aa5.65□□□□□ -1.5
CSDE1-212ENST00000529046 VEGFAP15692 232 aaPredicted RBP5.65□□□□□ -1.5
CSDE1-212ENST00000529046 ZKSCAN1P17029 563 aaPredicted RBP5.65□□□□□ -1.5
CSDE1-212ENST00000529046 CHRM3P20309 590 aa5.65□□□□□ -1.5
CSDE1-212ENST00000529046 CHRNA5P30532 468 aa5.65□□□□□ -1.5
CSDE1-212ENST00000529046 PXNP49023 591 aaPredicted RBP5.65□□□□□ -1.5
CSDE1-212ENST00000529046 DGKEP52429 567 aa5.65□□□□□ -1.5
CSDE1-212ENST00000529046 RBM20Q5T481 1227 aaKnown RBP5.65□□□□□ -1.5
CSDE1-212ENST00000529046 FCRL6Q6DN72 434 aa5.65□□□□□ -1.5
CSDE1-212ENST00000529046 ZDHHC24Q6UX98 284 aa5.65□□□□□ -1.5
CSDE1-212ENST00000529046 TMEM108Q6UXF1 575 aa5.65□□□□□ -1.5
CSDE1-212ENST00000529046 RD3Q7Z3Z2 195 aa5.65□□□□□ -1.5
CSDE1-212ENST00000529046 ZNF280BQ86YH2 543 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms