RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 C2orf42Q9NWW7 574 aa27.63■■■□□ 2.01
TSPAN4-217ENST00000527644 MARCH2Q9P0N8 246 aa27.63■■■□□ 2.01
TSPAN4-217ENST00000527644 ZNF510Q9Y2H8 683 aa27.63■■■□□ 2.01
TSPAN4-217ENST00000527644 RIF1Q5UIP0 2472 aaKnown RBP27.62■■■□□ 2.01
TSPAN4-217ENST00000527644 PALM2-AKAP2B1ALY0 433 aaPredicted RBP27.62■■■□□ 2.01
TSPAN4-217ENST00000527644 K7ESF4 209 aa27.62■■■□□ 2.01
TSPAN4-217ENST00000527644 LETM1O95202 739 aaPredicted RBP27.62■■■□□ 2.01
TSPAN4-217ENST00000527644 GNA15P30679 374 aa27.62■■■□□ 2.01
TSPAN4-217ENST00000527644 HOXA6P31267 233 aa27.62■■■□□ 2.01
TSPAN4-217ENST00000527644 GPD2P43304 727 aa27.62■■■□□ 2.01
TSPAN4-217ENST00000527644 SLC6A11P48066 632 aa27.62■■■□□ 2.01
TSPAN4-217ENST00000527644 DAOAP59103 153 aa27.62■■■□□ 2.01
TSPAN4-217ENST00000527644 BSPRYQ5W0U4 402 aa27.62■■■□□ 2.01
TSPAN4-217ENST00000527644 Q6ZNB5 142 aa27.62■■■□□ 2.01
TSPAN4-217ENST00000527644 TMEM25Q86YD3 366 aa27.62■■■□□ 2.01
TSPAN4-217ENST00000527644 ZNF606Q8WXB4 792 aa27.62■■■□□ 2.01
TSPAN4-217ENST00000527644 IRGQQ8WZA9 623 aa27.62■■■□□ 2.01
TSPAN4-217ENST00000527644 SHC3Q92529 594 aa27.62■■■□□ 2.01
TSPAN4-217ENST00000527644 MYOFQ9NZM1 2061 aa27.62■■■□□ 2.01
TSPAN4-217ENST00000527644 YJEFN3A6XGL0 299 aa27.61■■■□□ 2.01
TSPAN4-217ENST00000527644 BECN2A8MW95 431 aa27.61■■■□□ 2.01
TSPAN4-217ENST00000527644 E7ENQ6 273 aa27.61■■■□□ 2.01
TSPAN4-217ENST00000527644 GABBR2O75899 941 aa27.61■■■□□ 2.01
TSPAN4-217ENST00000527644 USP8P40818 1118 aa27.61■■■□□ 2.01
TSPAN4-217ENST00000527644 ANO4Q32M45 955 aa27.61■■■□□ 2.01
TSPAN4-217ENST00000527644 C12orf40Q86WS4 652 aa27.61■■■□□ 2.01
TSPAN4-217ENST00000527644 DCLK3Q9C098 648 aa27.61■■■□□ 2.01
TSPAN4-217ENST00000527644 ABCC13Q9NSE7 274 aa27.61■■■□□ 2.01
TSPAN4-217ENST00000527644 ATG2BQ96BY7 2078 aa27.6■■■□□ 2.01
TSPAN4-217ENST00000527644 A0A0A0MRY4 1105 aa27.6■■■□□ 2.01
TSPAN4-217ENST00000527644 K7EQS6 105 aa27.6■■■□□ 2.01
TSPAN4-217ENST00000527644 PES1O00541 588 aaKnown RBP27.6■■■□□ 2.01
TSPAN4-217ENST00000527644 THAP12O43422 761 aa27.6■■■□□ 2.01
TSPAN4-217ENST00000527644 FBXO21O94952 628 aa27.6■■■□□ 2.01
TSPAN4-217ENST00000527644 APODP05090 189 aa27.6■■■□□ 2.01
TSPAN4-217ENST00000527644 RPL34P49207 117 aaKnown RBP27.6■■■□□ 2.01
TSPAN4-217ENST00000527644 STX1AQ16623 288 aa27.6■■■□□ 2.01
TSPAN4-217ENST00000527644 PREPLQ4J6C6 727 aaPredicted RBP27.6■■■□□ 2.01
TSPAN4-217ENST00000527644 RPLP0P6Q8NHW5 317 aa27.6■■■□□ 2.01
TSPAN4-217ENST00000527644 RNF139Q8WU17 664 aa27.6■■■□□ 2.01
TSPAN4-217ENST00000527644 DNAJC12Q9UKB3 198 aa27.6■■■□□ 2.01
TSPAN4-217ENST00000527644 SLC8A2Q9UPR5 921 aa27.6■■■□□ 2.01
TSPAN4-217ENST00000527644 SLC12A8A0AV02 714 aa27.59■■■□□ 2.01
TSPAN4-217ENST00000527644 KAT7O95251 611 aa27.59■■■□□ 2.01
TSPAN4-217ENST00000527644 GRIA2P42262 883 aa27.59■■■□□ 2.01
TSPAN4-217ENST00000527644 CDKAL1Q5VV42 579 aa27.59■■■□□ 2.01
TSPAN4-217ENST00000527644 DENND1BQ6P3S1 775 aa27.59■■■□□ 2.01
TSPAN4-217ENST00000527644 ETFBKMTQ8IXQ9 262 aa27.59■■■□□ 2.01
TSPAN4-217ENST00000527644 STK32AQ8WU08 396 aa27.59■■■□□ 2.01
TSPAN4-217ENST00000527644 ACDQ96AP0 544 aa27.59■■■□□ 2.01
TSPAN4-217ENST00000527644 ACP6Q9NPH0 428 aa27.59■■■□□ 2.01
TSPAN4-217ENST00000527644 ARHGEF4Q9NR80 690 aa27.59■■■□□ 2.01
TSPAN4-217ENST00000527644 MARK1Q9P0L2 795 aa27.59■■■□□ 2.01
TSPAN4-217ENST00000527644 WDR35Q9P2L0 1181 aa27.59■■■□□ 2.01
TSPAN4-217ENST00000527644 PIK3R2O00459 728 aa27.58■■■□□ 2.01
TSPAN4-217ENST00000527644 KLKB1P03952 638 aa27.58■■■□□ 2.01
TSPAN4-217ENST00000527644 HMBSP08397 361 aa27.58■■■□□ 2.01
TSPAN4-217ENST00000527644 ACADSBP45954 432 aa27.58■■■□□ 2.01
TSPAN4-217ENST00000527644 DPY19L2P1Q6NXN4 242 aa27.58■■■□□ 2.01
TSPAN4-217ENST00000527644 SYT13Q7L8C5 426 aa27.58■■■□□ 2.01
TSPAN4-217ENST00000527644 LONP2Q86WA8 852 aa27.58■■■□□ 2.01
TSPAN4-217ENST00000527644 NAT16Q8N8M0 369 aa27.58■■■□□ 2.01
TSPAN4-217ENST00000527644 EDEM1Q92611 657 aa27.58■■■□□ 2.01
TSPAN4-217ENST00000527644 GOLGA1Q92805 767 aa27.58■■■□□ 2.01
TSPAN4-217ENST00000527644 PLD4Q96BZ4 506 aa27.58■■■□□ 2.01
TSPAN4-217ENST00000527644 DEC1Q9P2X7 70 aa27.58■■■□□ 2.01
TSPAN4-217ENST00000527644 FAM186AA6NE01 2351 aa27.57■■■□□ 2
TSPAN4-217ENST00000527644 TULP3O75386 442 aa27.57■■■□□ 2
TSPAN4-217ENST00000527644 CORO1AP31146 461 aaKnown RBP27.57■■■□□ 2
TSPAN4-217ENST00000527644 FNTBP49356 437 aa27.57■■■□□ 2
TSPAN4-217ENST00000527644 PTK2Q05397 1052 aa27.57■■■□□ 2
TSPAN4-217ENST00000527644 KCNMA1Q12791 1236 aa27.57■■■□□ 2
TSPAN4-217ENST00000527644 TPGS1Q6ZTW0 290 aa27.57■■■□□ 2
TSPAN4-217ENST00000527644 C11orf57Q6ZUT1 292 aaPredicted RBP27.57■■■□□ 2
TSPAN4-217ENST00000527644 FMNL3Q8IVF7 1028 aa27.57■■■□□ 2
TSPAN4-217ENST00000527644 SUMF1Q8NBK3 374 aa27.57■■■□□ 2
TSPAN4-217ENST00000527644 USP33Q8TEY7 942 aa27.57■■■□□ 2
TSPAN4-217ENST00000527644 XPO6Q96QU8 1125 aaKnown RBP27.57■■■□□ 2
TSPAN4-217ENST00000527644 BBS2Q9BXC9 721 aa27.57■■■□□ 2
TSPAN4-217ENST00000527644 EPC1Q9H2F5 836 aa27.57■■■□□ 2
TSPAN4-217ENST00000527644 ST7Q9NRC1 585 aa27.57■■■□□ 2
TSPAN4-217ENST00000527644 AJAP1Q9UKB5 411 aaPredicted RBP27.57■■■□□ 2
TSPAN4-217ENST00000527644 HBS1LQ9Y450 684 aaKnown RBP27.57■■■□□ 2
TSPAN4-217ENST00000527644 PTPRZ1P23471 2315 aaPredicted RBP27.57■■■□□ 2
TSPAN4-217ENST00000527644 NEDD8-MDP1E9PL57 170 aa27.56■■■□□ 2
TSPAN4-217ENST00000527644 FOXN3O00409 490 aaPredicted RBP27.56■■■□□ 2
TSPAN4-217ENST00000527644 CHKAP35790 457 aa27.56■■■□□ 2
TSPAN4-217ENST00000527644 TNFRSF4P43489 277 aa27.56■■■□□ 2
TSPAN4-217ENST00000527644 SEC13P55735 322 aa27.56■■■□□ 2
TSPAN4-217ENST00000527644 MRPS21P82921 87 aaKnown RBP27.56■■■□□ 2
TSPAN4-217ENST00000527644 DMWDQ09019 674 aa27.56■■■□□ 2
TSPAN4-217ENST00000527644 MESP2Q0VG99 397 aa27.56■■■□□ 2
TSPAN4-217ENST00000527644 TRIP4Q15650 581 aaPredicted RBP27.56■■■□□ 2
TSPAN4-217ENST00000527644 PHTF2Q8N3S3 785 aa27.56■■■□□ 2
TSPAN4-217ENST00000527644 CAMKK1Q8N5S9 505 aa27.56■■■□□ 2
TSPAN4-217ENST00000527644 SLC4A5Q9BY07 1137 aa27.56■■■□□ 2
TSPAN4-217ENST00000527644 MIS12Q9H081 205 aa27.56■■■□□ 2
TSPAN4-217ENST00000527644 FANCLQ9NW38 375 aa27.56■■■□□ 2
TSPAN4-217ENST00000527644 TAB2Q9NYJ8 693 aa27.56■■■□□ 2
TSPAN4-217ENST00000527644 SFMBT1Q9UHJ3 866 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms