RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 TIAL1Q01085 375 aaKnown RBP eCLIP3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 AMPD3Q01432 767 aa3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 PTGR1Q14914 329 aa3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 ODF3L2Q3SX64 289 aa3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 RNF187Q5TA31 235 aaPredicted RBP3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 DAAM2Q86T65 1068 aa3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 FBXL14Q8N1E6 418 aa3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 METTL25Q8N6Q8 603 aa3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 PNPLA1Q8N8W4 532 aa3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 BCAS4Q8TDM0 211 aa3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 PIGKQ92643 395 aa3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 MIB2Q96AX9 1013 aa3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 VPS50Q96JG6 964 aa3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 PPP1R9BQ96SB3 815 aa3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 TUBB6Q9BUF5 446 aa3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 SMURF2Q9HAU4 748 aa3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 AGO4Q9HCK5 861 aaKnown RBP3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 TRIM36Q9NQ86 728 aa3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 A1CFQ9NQ94 594 aaKnown RBP3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 MSRB1Q9NZV6 116 aa3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 DNMT3BQ9UBC3 853 aaKnown RBP3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 ANAPC4Q9UJX5 808 aa3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 HEMK1Q9Y5R4 338 aaPredicted RBP3.33□□□□□ -1.88
ECHDC1-219ENST00000526299 H7C4K7 107 aa3.32□□□□□ -1.88
ECHDC1-219ENST00000526299 AGPSO00116 658 aa3.32□□□□□ -1.88
ECHDC1-219ENST00000526299 NTN3O00634 580 aaPredicted RBP3.32□□□□□ -1.88
ECHDC1-219ENST00000526299 ACOT8O14734 319 aa3.32□□□□□ -1.88
ECHDC1-219ENST00000526299 CA12O43570 354 aa3.32□□□□□ -1.88
ECHDC1-219ENST00000526299 OFD1O75665 1012 aa3.32□□□□□ -1.88
ECHDC1-219ENST00000526299 RASSF9O75901 435 aa3.32□□□□□ -1.88
ECHDC1-219ENST00000526299 CAMTA2O94983 1202 aa3.32□□□□□ -1.88
ECHDC1-219ENST00000526299 P2RX3P56373 397 aa3.32□□□□□ -1.88
ECHDC1-219ENST00000526299 STK3Q13188 491 aa3.32□□□□□ -1.88
ECHDC1-219ENST00000526299 MTA1Q13330 715 aa3.32□□□□□ -1.88
ECHDC1-219ENST00000526299 ZNF267Q14586 743 aaPredicted RBP3.32□□□□□ -1.88
ECHDC1-219ENST00000526299 PDXDC1Q6P996 788 aa3.32□□□□□ -1.88
ECHDC1-219ENST00000526299 CHPFQ8IZ52 775 aa3.32□□□□□ -1.88
ECHDC1-219ENST00000526299 ADGRF4Q8IZF3 695 aa3.32□□□□□ -1.88
ECHDC1-219ENST00000526299 IQCF1Q8N6M8 205 aa3.32□□□□□ -1.88
ECHDC1-219ENST00000526299 SLC44A5Q8NCS7 719 aa3.32□□□□□ -1.88
ECHDC1-219ENST00000526299 JPH3Q8WXH2 748 aaPredicted RBP3.32□□□□□ -1.88
ECHDC1-219ENST00000526299 ATP2A3Q93084 1043 aa3.32□□□□□ -1.88
ECHDC1-219ENST00000526299 SPSB4Q96A44 273 aa3.32□□□□□ -1.88
ECHDC1-219ENST00000526299 MED30Q96HR3 178 aa3.32□□□□□ -1.88
ECHDC1-219ENST00000526299 FCRL5Q96RD9 977 aa3.32□□□□□ -1.88
ECHDC1-219ENST00000526299 DPH1Q9BZG8 443 aa3.32□□□□□ -1.88
ECHDC1-219ENST00000526299 ZNF518BQ9C0D4 1074 aa3.32□□□□□ -1.88
ECHDC1-219ENST00000526299 IP6K2Q9UHH9 426 aa3.32□□□□□ -1.88
ECHDC1-219ENST00000526299 PCDHA12Q9UN75 941 aa3.32□□□□□ -1.88
ECHDC1-219ENST00000526299 LOC102723971A0A1B0GUV8 181 aa3.31□□□□□ -1.88
ECHDC1-219ENST00000526299 SLC22A23A1A5C7 686 aa3.31□□□□□ -1.88
ECHDC1-219ENST00000526299 A8MVJ9 347 aa3.31□□□□□ -1.88
ECHDC1-219ENST00000526299 PHGDHO43175 533 aaKnown RBP3.31□□□□□ -1.88
ECHDC1-219ENST00000526299 UGDHO60701 494 aa3.31□□□□□ -1.88
ECHDC1-219ENST00000526299 PRAMEF2O60811 474 aa3.31□□□□□ -1.88
ECHDC1-219ENST00000526299 USP12O75317 370 aa3.31□□□□□ -1.88
ECHDC1-219ENST00000526299 PARP1P09874 1014 aaKnown RBP3.31□□□□□ -1.88
ECHDC1-219ENST00000526299 TBXAS1P24557 533 aaPredicted RBP3.31□□□□□ -1.88
ECHDC1-219ENST00000526299 ADRA1DP25100 572 aa3.31□□□□□ -1.88
ECHDC1-219ENST00000526299 HTR1BP28222 390 aa3.31□□□□□ -1.88
ECHDC1-219ENST00000526299 HOXA7P31268 230 aaPredicted RBP3.31□□□□□ -1.88
ECHDC1-219ENST00000526299 MLH1P40692 756 aa3.31□□□□□ -1.88
ECHDC1-219ENST00000526299 PTDSS1P48651 473 aaKnown RBP3.31□□□□□ -1.88
ECHDC1-219ENST00000526299 POLD2P49005 469 aa3.31□□□□□ -1.88
ECHDC1-219ENST00000526299 JAK3P52333 1124 aa3.31□□□□□ -1.88
ECHDC1-219ENST00000526299 TXNL4AP83876 142 aaKnown RBP3.31□□□□□ -1.88
ECHDC1-219ENST00000526299 CCDC15Q0P6D6 951 aa3.31□□□□□ -1.88
ECHDC1-219ENST00000526299 IFIT1BQ5T764 474 aaKnown RBP3.31□□□□□ -1.88
ECHDC1-219ENST00000526299 CLEC9AQ6UXN8 241 aa3.31□□□□□ -1.88
ECHDC1-219ENST00000526299 TFAP2DQ7Z6R9 452 aa3.31□□□□□ -1.88
ECHDC1-219ENST00000526299 ZBTB46Q86UZ6 589 aa3.31□□□□□ -1.88
ECHDC1-219ENST00000526299 SPATA2LQ8IUW3 424 aaPredicted RBP3.31□□□□□ -1.88
ECHDC1-219ENST00000526299 OR56A3Q8NH54 315 aa3.31□□□□□ -1.88
ECHDC1-219ENST00000526299 OIT3Q8WWZ8 545 aa3.31□□□□□ -1.88
ECHDC1-219ENST00000526299 PRR11Q96HE9 360 aaPredicted RBP3.31□□□□□ -1.88
ECHDC1-219ENST00000526299 ZMAT3Q9HA38 289 aaKnown RBP3.31□□□□□ -1.88
ECHDC1-219ENST00000526299 ANKRD6Q9Y2G4 727 aa3.31□□□□□ -1.88
ECHDC1-219ENST00000526299 TRBV5-3A0A0A0MS03 114 aa3.3□□□□□ -1.88
ECHDC1-219ENST00000526299 C16orf96A6NNT2 1141 aa3.3□□□□□ -1.88
ECHDC1-219ENST00000526299 F8W810 466 aa3.3□□□□□ -1.88
ECHDC1-219ENST00000526299 TLX3O43711 291 aaPredicted RBP3.3□□□□□ -1.88
ECHDC1-219ENST00000526299 RRP9O43818 475 aaKnown RBP3.3□□□□□ -1.88
ECHDC1-219ENST00000526299 PIAS2O75928 621 aa3.3□□□□□ -1.88
ECHDC1-219ENST00000526299 UBXN7O94888 489 aa3.3□□□□□ -1.88
ECHDC1-219ENST00000526299 PF4V1P10720 104 aa3.3□□□□□ -1.88
ECHDC1-219ENST00000526299 RPS6KB1P23443 525 aa3.3□□□□□ -1.88
ECHDC1-219ENST00000526299 NTSR1P30989 418 aa3.3□□□□□ -1.88
ECHDC1-219ENST00000526299 GALNSP34059 522 aa3.3□□□□□ -1.88
ECHDC1-219ENST00000526299 SLC12A2P55011 1212 aa3.3□□□□□ -1.88
ECHDC1-219ENST00000526299 LTBQ06643 244 aa3.3□□□□□ -1.88
ECHDC1-219ENST00000526299 KEAP1Q14145 624 aa3.3□□□□□ -1.88
ECHDC1-219ENST00000526299 NUGGCQ68CJ6 796 aa3.3□□□□□ -1.88
ECHDC1-219ENST00000526299 NPNTQ6UXI9 565 aa3.3□□□□□ -1.88
ECHDC1-219ENST00000526299 COL23A1Q86Y22 540 aaPredicted RBP3.3□□□□□ -1.88
ECHDC1-219ENST00000526299 DIS3LQ8TF46 1054 aaKnown RBP3.3□□□□□ -1.88
ECHDC1-219ENST00000526299 MSI2Q96DH6 328 aaKnown RBP3.3□□□□□ -1.88
ECHDC1-219ENST00000526299 HIST1H2AAQ96QV6 131 aa3.3□□□□□ -1.88
ECHDC1-219ENST00000526299 STK31Q9BXU1 1019 aa3.3□□□□□ -1.88
ECHDC1-219ENST00000526299 RBM38Q9H0Z9 239 aaKnown RBP3.3□□□□□ -1.88
ECHDC1-219ENST00000526299 MOV10Q9HCE1 1003 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms