RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 ACP6Q9NPH0 428 aa19.4■□□□□ 0.7
TSPAN4-215ENST00000525334 SPHK2Q9NRA0 654 aa19.4■□□□□ 0.7
TSPAN4-215ENST00000525334 MYOFQ9NZM1 2061 aa19.4■□□□□ 0.7
TSPAN4-215ENST00000525334 EP300Q09472 2414 aaPredicted RBP19.4■□□□□ 0.7
TSPAN4-215ENST00000525334 K7ESF4 209 aa19.39■□□□□ 0.69
TSPAN4-215ENST00000525334 PES1O00541 588 aaKnown RBP19.39■□□□□ 0.69
TSPAN4-215ENST00000525334 HOXC11O43248 304 aaPredicted RBP19.39■□□□□ 0.69
TSPAN4-215ENST00000525334 THAP12O43422 761 aa19.39■□□□□ 0.69
TSPAN4-215ENST00000525334 GNA15P30679 374 aa19.39■□□□□ 0.69
TSPAN4-215ENST00000525334 USP8P40818 1118 aa19.39■□□□□ 0.69
TSPAN4-215ENST00000525334 EIF2DP41214 584 aaKnown RBP19.39■□□□□ 0.69
TSPAN4-215ENST00000525334 STX1AQ16623 288 aa19.39■□□□□ 0.69
TSPAN4-215ENST00000525334 CDKAL1Q5VV42 579 aa19.39■□□□□ 0.69
TSPAN4-215ENST00000525334 BSPRYQ5W0U4 402 aa19.39■□□□□ 0.69
TSPAN4-215ENST00000525334 DENND1BQ6P3S1 775 aa19.39■□□□□ 0.69
TSPAN4-215ENST00000525334 Q6ZNB5 142 aa19.39■□□□□ 0.69
TSPAN4-215ENST00000525334 TMEM25Q86YD3 366 aa19.39■□□□□ 0.69
TSPAN4-215ENST00000525334 HSFY1Q96LI6 401 aa19.39■□□□□ 0.69
TSPAN4-215ENST00000525334 ANO10Q9NW15 660 aa19.39■□□□□ 0.69
TSPAN4-215ENST00000525334 TAB2Q9NYJ8 693 aa19.39■□□□□ 0.69
TSPAN4-215ENST00000525334 MARCH2Q9P0N8 246 aa19.39■□□□□ 0.69
TSPAN4-215ENST00000525334 DNAJC12Q9UKB3 198 aa19.39■□□□□ 0.69
TSPAN4-215ENST00000525334 STRIP2Q9ULQ0 834 aa19.39■□□□□ 0.69
TSPAN4-215ENST00000525334 KIAA1549LQ6ZVL6 1849 aa19.39■□□□□ 0.69
TSPAN4-215ENST00000525334 CHURC1-FNTBB4DL54 471 aa19.38■□□□□ 0.69
TSPAN4-215ENST00000525334 MED7O43513 233 aa19.38■□□□□ 0.69
TSPAN4-215ENST00000525334 LILRB5O75023 590 aa19.38■□□□□ 0.69
TSPAN4-215ENST00000525334 ATG13O75143 517 aa19.38■□□□□ 0.69
TSPAN4-215ENST00000525334 HMBSP08397 361 aa19.38■□□□□ 0.69
TSPAN4-215ENST00000525334 HOXC13P31276 330 aa19.38■□□□□ 0.69
TSPAN4-215ENST00000525334 GPD2P43304 727 aa19.38■□□□□ 0.69
TSPAN4-215ENST00000525334 NRLP54845 237 aa19.38■□□□□ 0.69
TSPAN4-215ENST00000525334 COG7P83436 770 aa19.38■□□□□ 0.69
TSPAN4-215ENST00000525334 MESP2Q0VG99 397 aa19.38■□□□□ 0.69
TSPAN4-215ENST00000525334 MEA1Q16626 185 aa19.38■□□□□ 0.69
TSPAN4-215ENST00000525334 ANO4Q32M45 955 aa19.38■□□□□ 0.69
TSPAN4-215ENST00000525334 DPY19L2P1Q6NXN4 242 aa19.38■□□□□ 0.69
TSPAN4-215ENST00000525334 SUMF1Q8NBK3 374 aa19.38■□□□□ 0.69
TSPAN4-215ENST00000525334 RPLP0P6Q8NHW5 317 aa19.38■□□□□ 0.69
TSPAN4-215ENST00000525334 ZNF606Q8WXB4 792 aa19.38■□□□□ 0.69
TSPAN4-215ENST00000525334 EDEM1Q92611 657 aa19.38■□□□□ 0.69
TSPAN4-215ENST00000525334 PNKPQ96T60 521 aa19.38■□□□□ 0.69
TSPAN4-215ENST00000525334 OLA1Q9NTK5 396 aaKnown RBP19.38■□□□□ 0.69
TSPAN4-215ENST00000525334 TMEM63CQ9P1W3 806 aa19.38■□□□□ 0.69
TSPAN4-215ENST00000525334 ATG2BQ96BY7 2078 aa19.37■□□□□ 0.69
TSPAN4-215ENST00000525334 CFAP54Q96N23 3096 aa19.37■□□□□ 0.69
TSPAN4-215ENST00000525334 SLC12A8A0AV02 714 aa19.37■□□□□ 0.69
TSPAN4-215ENST00000525334 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.37■□□□□ 0.69
TSPAN4-215ENST00000525334 K7EQS6 105 aa19.37■□□□□ 0.69
TSPAN4-215ENST00000525334 KLKB1P03952 638 aa19.37■□□□□ 0.69
TSPAN4-215ENST00000525334 KDSRQ06136 332 aa19.37■□□□□ 0.69
TSPAN4-215ENST00000525334 DMWDQ09019 674 aa19.37■□□□□ 0.69
TSPAN4-215ENST00000525334 KCNMA1Q12791 1236 aa19.37■□□□□ 0.69
TSPAN4-215ENST00000525334 SFTPA1Q8IWL2 248 aa19.37■□□□□ 0.69
TSPAN4-215ENST00000525334 ETFBKMTQ8IXQ9 262 aa19.37■□□□□ 0.69
TSPAN4-215ENST00000525334 NAT16Q8N8M0 369 aa19.37■□□□□ 0.69
TSPAN4-215ENST00000525334 CLEC4CQ8WTT0 213 aa19.37■□□□□ 0.69
TSPAN4-215ENST00000525334 RNF139Q8WU17 664 aa19.37■□□□□ 0.69
TSPAN4-215ENST00000525334 IRGQQ8WZA9 623 aa19.37■□□□□ 0.69
TSPAN4-215ENST00000525334 ABCC13Q9NSE7 274 aa19.37■□□□□ 0.69
TSPAN4-215ENST00000525334 POLR3BQ9NW08 1133 aaPredicted RBP19.37■□□□□ 0.69
TSPAN4-215ENST00000525334 FANCLQ9NW38 375 aa19.37■□□□□ 0.69
TSPAN4-215ENST00000525334 GVINP1Q7Z2Y8 2422 aa19.37■□□□□ 0.69
TSPAN4-215ENST00000525334 ANTXRLA6NF34 631 aa19.36■□□□□ 0.69
TSPAN4-215ENST00000525334 NEDD8-MDP1E9PL57 170 aa19.36■□□□□ 0.69
TSPAN4-215ENST00000525334 FBXO21O94952 628 aa19.36■□□□□ 0.69
TSPAN4-215ENST00000525334 KAT7O95251 611 aa19.36■□□□□ 0.69
TSPAN4-215ENST00000525334 PNMA6AP0CW24 399 aaPredicted RBP19.36■□□□□ 0.69
TSPAN4-215ENST00000525334 CORO1AP31146 461 aaKnown RBP19.36■□□□□ 0.69
TSPAN4-215ENST00000525334 RPL34P49207 117 aaKnown RBP19.36■□□□□ 0.69
TSPAN4-215ENST00000525334 FNTBP49356 437 aa19.36■□□□□ 0.69
TSPAN4-215ENST00000525334 SEC13P55735 322 aa19.36■□□□□ 0.69
TSPAN4-215ENST00000525334 KRT31Q15323 416 aa19.36■□□□□ 0.69
TSPAN4-215ENST00000525334 TPGS1Q6ZTW0 290 aa19.36■□□□□ 0.69
TSPAN4-215ENST00000525334 FMNL3Q8IVF7 1028 aa19.36■□□□□ 0.69
TSPAN4-215ENST00000525334 PHTF2Q8N3S3 785 aa19.36■□□□□ 0.69
TSPAN4-215ENST00000525334 MIS12Q9H081 205 aa19.36■□□□□ 0.69
TSPAN4-215ENST00000525334 ARHGEF4Q9NR80 690 aa19.36■□□□□ 0.69
TSPAN4-215ENST00000525334 ST7Q9NRC1 585 aa19.36■□□□□ 0.69
TSPAN4-215ENST00000525334 MARK1Q9P0L2 795 aa19.36■□□□□ 0.69
TSPAN4-215ENST00000525334 CYTH4Q9UIA0 394 aa19.36■□□□□ 0.69
TSPAN4-215ENST00000525334 ZNF510Q9Y2H8 683 aa19.36■□□□□ 0.69
TSPAN4-215ENST00000525334 FOXN3O00409 490 aaPredicted RBP19.35■□□□□ 0.69
TSPAN4-215ENST00000525334 TULP3O75386 442 aa19.35■□□□□ 0.69
TSPAN4-215ENST00000525334 APODP05090 189 aa19.35■□□□□ 0.69
TSPAN4-215ENST00000525334 GRIA2P42262 883 aa19.35■□□□□ 0.69
TSPAN4-215ENST00000525334 MYL5Q02045 173 aa19.35■□□□□ 0.69
TSPAN4-215ENST00000525334 HEATR6Q6AI08 1181 aaKnown RBP19.35■□□□□ 0.69
TSPAN4-215ENST00000525334 SMYD5Q6GMV2 418 aa19.35■□□□□ 0.69
TSPAN4-215ENST00000525334 CCDC26Q8TAB7 109 aa19.35■□□□□ 0.69
TSPAN4-215ENST00000525334 USP33Q8TEY7 942 aa19.35■□□□□ 0.69
TSPAN4-215ENST00000525334 STK32AQ8WU08 396 aa19.35■□□□□ 0.69
TSPAN4-215ENST00000525334 ACDQ96AP0 544 aa19.35■□□□□ 0.69
TSPAN4-215ENST00000525334 PLD4Q96BZ4 506 aa19.35■□□□□ 0.69
TSPAN4-215ENST00000525334 LSM14BQ9BX40 385 aaKnown RBP19.35■□□□□ 0.69
TSPAN4-215ENST00000525334 BBS2Q9BXC9 721 aa19.35■□□□□ 0.69
TSPAN4-215ENST00000525334 DCLK3Q9C098 648 aa19.35■□□□□ 0.69
TSPAN4-215ENST00000525334 VPS16Q9H269 839 aa19.35■□□□□ 0.69
TSPAN4-215ENST00000525334 SFMBT1Q9UHJ3 866 aa19.35■□□□□ 0.69
TSPAN4-215ENST00000525334 AGO1Q9UL18 857 aaKnown RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms