RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 C17orf75Q9HAS0 396 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 RXFP1Q9HBX9 757 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 CRLF2Q9HC73 371 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 ATP13A1Q9HD20 1204 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 LTB4R2Q9NPC1 389 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 ARHGEF3Q9NR81 526 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 SLC35D1Q9NTN3 355 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 RBM12Q9NTZ6 932 aaKnown RBP4.74□□□□□ -1.65
CD44-213ENST00000525209 GIMAP4Q9NUV9 329 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 TDP1Q9NUW8 608 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 NMRK1Q9NWW6 199 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 COX16Q9P0S2 106 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 FETUBQ9UGM5 382 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 CNOT7Q9UIV1 285 aaKnown RBP4.74□□□□□ -1.65
CD44-213ENST00000525209 APPL1Q9UKG1 709 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 GRID1Q9ULK0 1009 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 BTBD3Q9Y2F9 522 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 WDR37Q9Y2I8 494 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 MED16Q9Y2X0 877 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 PCDHGA5Q9Y5G8 931 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 PCDHGA1Q9Y5H4 931 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 KDRP35968 1356 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 GAPVD1Q14C86 1478 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 LOC100289279A0A1B0GTE1 492 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 UBA6A0AVT1 1052 aaPredicted RBP4.73□□□□□ -1.65
CD44-213ENST00000525209 MBD3L4A6NDZ8 208 aaPredicted RBP4.73□□□□□ -1.65
CD44-213ENST00000525209 MBD3L3A6NE82 208 aaPredicted RBP4.73□□□□□ -1.65
CD44-213ENST00000525209 SAC3D1A6NKF1 404 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 MYO1GB0I1T2 1018 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 H0Y858 1186 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 IGF2BP3O00425 579 aaKnown RBP eCLIP4.73□□□□□ -1.65
CD44-213ENST00000525209 VWA5AO00534 786 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 TNPO2O14787 897 aaKnown RBP4.73□□□□□ -1.65
CD44-213ENST00000525209 MAGEB3O15480 346 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 CA12O43570 354 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 DYRK3O43781 588 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 LRRN2O75325 713 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 GUCY1B2O75343 617 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 APOL3O95236 402 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 PDE8BO95263 885 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 ABHD16AO95870 558 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 CELA3BP08861 270 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 SPARCP09486 303 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 RARGP13631 454 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 IL1R2P27930 398 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 TNFRSF8P28908 595 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 PPARGP37231 505 aaPredicted RBP4.73□□□□□ -1.65
CD44-213ENST00000525209 ETV3P41162 512 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 RABIFP47224 123 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 ARCN1P48444 511 aaKnown RBP4.73□□□□□ -1.65
CD44-213ENST00000525209 CPT1AP50416 773 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 ALDH18A1P54886 795 aaKnown RBP4.73□□□□□ -1.65
CD44-213ENST00000525209 SOX8P57073 446 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 YPEL5P62699 121 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 RPL11P62913 178 aaKnown RBP4.73□□□□□ -1.65
CD44-213ENST00000525209 PPARAQ07869 468 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 LMAN2Q12907 356 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 TARDBPQ13148 414 aaKnown RBP eCLIP4.73□□□□□ -1.65
CD44-213ENST00000525209 CAPSQ13938 189 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 CRYMQ14894 314 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 RAB39AQ14964 217 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 NOMO1Q15155 1222 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 NFIL3Q16649 462 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 SLC5A9Q2M3M2 681 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 TRIM60Q495X7 471 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 SLC44A4Q53GD3 710 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 USP39Q53GS9 565 aaKnown RBP4.73□□□□□ -1.65
CD44-213ENST00000525209 NHSL2Q5HYW2 709 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 TTC38Q5R3I4 469 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 EMC10Q5UCC4 262 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 CES4AQ5XG92 561 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 GDF6Q6KF10 455 aaPredicted RBP4.73□□□□□ -1.65
CD44-213ENST00000525209 KIAA1841Q6NSI8 718 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 SLC25A24Q6NUK1 477 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 UNQ6494/PRO21346Q6UXR6 183 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 SYT13Q7L8C5 426 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 KANSL1Q7Z3B3 1105 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 FAM160B2Q86V87 743 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 CNTN4Q8IWV2 1026 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 RHOT2Q8IXI1 618 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 POC5Q8NA72 575 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 GLB1L3Q8NCI6 653 aaPredicted RBP4.73□□□□□ -1.65
CD44-213ENST00000525209 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.73□□□□□ -1.65
CD44-213ENST00000525209 ZCCHC10Q8TBK6 192 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 KCNE4Q8WWG9 221 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 PRPF31Q8WWY3 499 aaKnown RBP4.73□□□□□ -1.65
CD44-213ENST00000525209 TNFRSF25Q93038 417 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 FOXRED1Q96CU9 486 aaPredicted RBP4.73□□□□□ -1.65
CD44-213ENST00000525209 PERPQ96FX8 193 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 FAM111AQ96PZ2 611 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 DBNDD2Q9BQY9 259 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 TBCDQ9BTW9 1192 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 TUBB6Q9BUF5 446 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 CCDC94Q9BW85 323 aaPredicted RBP4.73□□□□□ -1.65
CD44-213ENST00000525209 PHF7Q9BWX1 381 aaPredicted RBP4.73□□□□□ -1.65
CD44-213ENST00000525209 SLC12A9Q9BXP2 914 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 MRPL46Q9H2W6 279 aaKnown RBP4.73□□□□□ -1.65
CD44-213ENST00000525209 YY1AP1Q9H869 796 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 VEZTQ9HBM0 779 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 RAD18Q9NS91 495 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms