RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, human

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-238	ENST00000523298	PRDM16	Q9HAZ2	1276 aa		5.29	□□□□□ -1.56
CTNNA1-238	ENST00000523298	STEAP1	Q9UHE8	339 aa		5.29	□□□□□ -1.56
CTNNA1-238	ENST00000523298	DGKB	Q9Y6T7	804 aa		5.29	□□□□□ -1.56
CTNNA1-238	ENST00000523298	KIF28P	B7ZC32	967 aa		5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298		M0R3H8	397 aa		5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298	FOXN1	O15353	648 aa		5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298	CTIF	O43310	598 aa	Known RBP	5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298	SNX2	O60749	519 aa		5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298	PRAMEF2	O60811	474 aa		5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298	DHRS4L1	P0CG22	281 aa		5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298	DRD4	P21917	467 aa		5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298	AKT1	P31749	480 aa		5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298	ACVRL1	P37023	503 aa		5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298	PTH2R	P49190	550 aa		5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298	MTHFS	P49914	203 aa		5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298	CYP4F2	P78329	520 aa		5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298	BLOC1S1	P78537	153 aa		5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298	ABHD18	Q0P651	414 aa		5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298	KCNJ12	Q14500	433 aa		5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298	ZNF362	Q5T0B9	420 aa	Predicted RBP	5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298	C16orf89	Q6UX73	402 aa		5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298	RRAGA	Q7L523	313 aa		5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298	MOGAT3	Q86VF5	341 aa		5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298	GATAD2A	Q86YP4	633 aa		5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298	SLC44A2	Q8IWA5	706 aa	Predicted RBP	5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298	SLC22A17	Q8WUG5	538 aa		5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298	TRAPPC12	Q8WVT3	735 aa		5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298	KAZALD1	Q96I82	304 aa		5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298	DDX23	Q9BUQ8	820 aa	Known RBP	5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298	VPS16	Q9H269	839 aa		5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298	SYNPO2L	Q9H987	977 aa		5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298	VPS45	Q9NRW7	570 aa		5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298	HELLS	Q9NRZ9	838 aa		5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298	LZTS1	Q9Y250	596 aa		5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298	PCDHB2	Q9Y5E7	798 aa		5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298	COL11A2	P13942	1736 aa	Predicted RBP	5.28	□□□□□ -1.56
CTNNA1-238	ENST00000523298	LOC105369274	A0A096LPK9	316 aa		5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	LOC102723532	A0A0G2JNH3	316 aa		5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	GXYLT2	A0PJZ3	443 aa		5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	CES2	O00748	559 aa		5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	SUV39H1	O43463	412 aa		5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	PPP6R2	O75170	966 aa		5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	ONECUT2	O95948	504 aa		5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	FGA	P02671	866 aa		5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	TMEM225B	P0DP42	221 aa		5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	CREB1	P16220	341 aa		5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	MCM7	P33993	719 aa		5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	RARRES1	P49788	294 aa		5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	ALDH18A1	P54886	795 aa	Known RBP	5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	TPTE	P56180	551 aa		5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	LMAN2	Q12907	356 aa		5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	TRIM60	Q495X7	471 aa		5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	TEDDM1	Q5T9Z0	273 aa		5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	RINT1	Q6NUQ1	792 aa		5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	PTCHD4	Q6ZW05	846 aa		5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	PARS2	Q7L3T8	475 aa	Known RBP	5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	RASAL3	Q86YV0	1011 aa		5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	OR4N4	Q8N0Y3	316 aa		5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	CLASRP	Q8N2M8	674 aa	Known RBP	5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	SPATA5	Q8NB90	893 aa		5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	CSGALNACT1	Q8TDX6	532 aa		5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	RTKN	Q9BST9	563 aa		5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	ISCA1	Q9BUE6	129 aa		5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	DPCD	Q9BVM2	203 aa	Predicted RBP	5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	TOR3A	Q9H497	397 aa		5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	TRIM36	Q9NQ86	728 aa		5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	ASIC5	Q9NY37	505 aa		5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	LRIT1	Q9P2V4	623 aa		5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	NKX1-2	Q9UD57	310 aa	Predicted RBP	5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	HERC5	Q9UII4	1024 aa	Known RBP	5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	ADAMTS5	Q9UNA0	930 aa		5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	CNTN6	Q9UQ52	1028 aa		5.27	□□□□□ -1.57
CTNNA1-238	ENST00000523298	CCDC187	A0A096LP49	1063 aa		5.26	□□□□□ -1.57
CTNNA1-238	ENST00000523298	CCDC189	A1A4V9	331 aa		5.26	□□□□□ -1.57
CTNNA1-238	ENST00000523298		A8MVJ9	347 aa		5.26	□□□□□ -1.57
CTNNA1-238	ENST00000523298	KIAA0355	O15063	1070 aa		5.26	□□□□□ -1.57
CTNNA1-238	ENST00000523298	FAM155B	O75949	473 aa		5.26	□□□□□ -1.57
CTNNA1-238	ENST00000523298	NXPH3	O95157	252 aa		5.26	□□□□□ -1.57
CTNNA1-238	ENST00000523298	ITGA2B	P08514	1039 aa		5.26	□□□□□ -1.57
CTNNA1-238	ENST00000523298	NHLRC4	P0CG21	123 aa	Predicted RBP	5.26	□□□□□ -1.57
CTNNA1-238	ENST00000523298	CLK3	P49761	638 aa	Known RBP	5.26	□□□□□ -1.57
CTNNA1-238	ENST00000523298	CCT8	P50990	548 aa		5.26	□□□□□ -1.57
CTNNA1-238	ENST00000523298	ZXDA	P98168	799 aa		5.26	□□□□□ -1.57
CTNNA1-238	ENST00000523298	CUL4B	Q13620	913 aa		5.26	□□□□□ -1.57
CTNNA1-238	ENST00000523298	PRKG1	Q13976	671 aa		5.26	□□□□□ -1.57
CTNNA1-238	ENST00000523298	ZRSR2	Q15696	482 aa	Known RBP	5.26	□□□□□ -1.57
CTNNA1-238	ENST00000523298	L1TD1	Q5T7N2	865 aa	Known RBP	5.26	□□□□□ -1.57
CTNNA1-238	ENST00000523298	CCDC144NL	Q6NUI1	221 aa		5.26	□□□□□ -1.57
CTNNA1-238	ENST00000523298	RASGRP2	Q7LDG7	609 aa		5.26	□□□□□ -1.57
CTNNA1-238	ENST00000523298	GALNT15	Q8N3T1	639 aa		5.26	□□□□□ -1.57
CTNNA1-238	ENST00000523298	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	5.26	□□□□□ -1.57
CTNNA1-238	ENST00000523298	RP9	Q8TA86	221 aa	Known RBP	5.26	□□□□□ -1.57
CTNNA1-238	ENST00000523298	NPIPB3	Q92617	1050 aa		5.26	□□□□□ -1.57
CTNNA1-238	ENST00000523298	REPS1	Q96D71	796 aa		5.26	□□□□□ -1.57
CTNNA1-238	ENST00000523298	NUDT22	Q9BRQ3	303 aa		5.26	□□□□□ -1.57
CTNNA1-238	ENST00000523298	SEPSECS	Q9HD40	501 aa	Known RBP	5.26	□□□□□ -1.57
CTNNA1-238	ENST00000523298	RCE1	Q9Y256	329 aa		5.26	□□□□□ -1.57
CTNNA1-238	ENST00000523298		A0A0U1RQG5	324 aa	Predicted RBP	5.25	□□□□□ -1.57
CTNNA1-238	ENST00000523298		H0Y3Z8	333 aa		5.25	□□□□□ -1.57
CTNNA1-238	ENST00000523298	C1QL1	O75973	258 aa		5.25	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms