RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 SEMA4GQ9NTN9 838 aa11.45□□□□□ -0.58
PVT1-216ENST00000523068 TSPAN16Q9UKR8 245 aa11.45□□□□□ -0.58
PVT1-216ENST00000523068 CDV3Q9UKY7 258 aaKnown RBP11.45□□□□□ -0.58
PVT1-216ENST00000523068 CTNND2Q9UQB3 1225 aa11.45□□□□□ -0.58
PVT1-216ENST00000523068 THADAQ6YHU6 1953 aa11.45□□□□□ -0.58
PVT1-216ENST00000523068 PLXND1Q9Y4D7 1925 aa11.45□□□□□ -0.58
PVT1-216ENST00000523068 MYO18AQ92614 2054 aaKnown RBP11.44□□□□□ -0.58
PVT1-216ENST00000523068 NUP205Q92621 2012 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 BIN1O00499 593 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 GREM1O60565 184 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 TULP3O75386 442 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 RHOBTB1O94844 696 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 ZBED1O96006 694 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 PAEPP09466 180 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 SETSIPP0DME0 302 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 BMP6P22004 513 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 TIE1P35590 1138 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 TKTL1P51854 596 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 LRMPQ12912 555 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 STILQ15468 1287 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 ELF2Q15723 593 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 CRY1Q16526 586 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 GOLGA7BQ2TAP0 167 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 USP39Q53GS9 565 aaKnown RBP11.44□□□□□ -0.58
PVT1-216ENST00000523068 PRR23CQ6ZRP0 262 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 RSRC2Q7L4I2 434 aaKnown RBP11.44□□□□□ -0.58
PVT1-216ENST00000523068 SCD5Q86SK9 330 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 KBTBD6Q86V97 674 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 TTC30AQ86WT1 665 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 TMEM25Q86YD3 366 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 MIB1Q86YT6 1006 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 PPM1KQ8N3J5 372 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 PHTF2Q8N3S3 785 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 ALLCQ8N6M5 410 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 TERB1Q8NA31 727 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 IL17RCQ8NAC3 791 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 TXNDC5Q8NBS9 432 aaKnown RBP11.44□□□□□ -0.58
PVT1-216ENST00000523068 WBP2Q969T9 261 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 CNOT6LQ96LI5 555 aaKnown RBP11.44□□□□□ -0.58
PVT1-216ENST00000523068 BBS2Q9BXC9 721 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 DCLK3Q9C098 648 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 LRRC4Q9HBW1 653 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 POLMQ9NP87 494 aaPredicted RBP11.44□□□□□ -0.58
PVT1-216ENST00000523068 OLA1Q9NTK5 396 aaKnown RBP11.44□□□□□ -0.58
PVT1-216ENST00000523068 DNAJC17Q9NVM6 304 aaKnown RBP11.44□□□□□ -0.58
PVT1-216ENST00000523068 POLR3BQ9NW08 1133 aaPredicted RBP11.44□□□□□ -0.58
PVT1-216ENST00000523068 MARK1Q9P0L2 795 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 RASAL2Q9UJF2 1139 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 NUDT5Q9UKK9 219 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 STRIP2Q9ULQ0 834 aa11.44□□□□□ -0.58
PVT1-216ENST00000523068 CEP192Q8TEP8 1941 aa11.43□□□□□ -0.58
PVT1-216ENST00000523068 NEDD8-MDP1E9PL57 170 aa11.43□□□□□ -0.58
PVT1-216ENST00000523068 MDM4O15151 490 aa11.43□□□□□ -0.58
PVT1-216ENST00000523068 CACNG3O60359 315 aa11.43□□□□□ -0.58
PVT1-216ENST00000523068 STC2O76061 302 aa11.43□□□□□ -0.58
PVT1-216ENST00000523068 LETM1O95202 739 aaPredicted RBP11.43□□□□□ -0.58
PVT1-216ENST00000523068 EPN2O95208 641 aa11.43□□□□□ -0.58
PVT1-216ENST00000523068 KLF8O95600 359 aaPredicted RBP11.43□□□□□ -0.58
PVT1-216ENST00000523068 TYRP14679 529 aa11.43□□□□□ -0.58
PVT1-216ENST00000523068 CHKAP35790 457 aa11.43□□□□□ -0.58
PVT1-216ENST00000523068 KIR2DL1P43626 348 aaPredicted RBP11.43□□□□□ -0.58
PVT1-216ENST00000523068 MARSP56192 900 aaKnown RBP11.43□□□□□ -0.58
PVT1-216ENST00000523068 YWHAGP61981 247 aaKnown RBP eCLIP11.43□□□□□ -0.58
PVT1-216ENST00000523068 PDE4CQ08493 712 aa11.43□□□□□ -0.58
PVT1-216ENST00000523068 EFEMP1Q12805 493 aa11.43□□□□□ -0.58
PVT1-216ENST00000523068 KCNH2Q12809 1159 aa11.43□□□□□ -0.58
PVT1-216ENST00000523068 C10orf76Q5T2E6 689 aa11.43□□□□□ -0.58
PVT1-216ENST00000523068 CCDC183Q5T5S1 534 aa11.43□□□□□ -0.58
PVT1-216ENST00000523068 PM20D1Q6GTS8 502 aa11.43□□□□□ -0.58
PVT1-216ENST00000523068 GRAMD4Q6IC98 578 aa11.43□□□□□ -0.58
PVT1-216ENST00000523068 ANO7Q6IWH7 933 aa11.43□□□□□ -0.58
PVT1-216ENST00000523068 TMEM270Q6UE05 265 aa11.43□□□□□ -0.58
PVT1-216ENST00000523068 Q6ZNB5 142 aa11.43□□□□□ -0.58
PVT1-216ENST00000523068 TPGS1Q6ZTW0 290 aa11.43□□□□□ -0.58
PVT1-216ENST00000523068 RASSF3Q86WH2 238 aa11.43□□□□□ -0.58
PVT1-216ENST00000523068 SIX6OS1Q8N1H7 587 aa11.43□□□□□ -0.58
PVT1-216ENST00000523068 CCDC33Q8N5R6 958 aa11.43□□□□□ -0.58
PVT1-216ENST00000523068 UBR7Q8N806 425 aa11.43□□□□□ -0.58
PVT1-216ENST00000523068 ZNF513Q8N8E2 541 aaPredicted RBP11.43□□□□□ -0.58
PVT1-216ENST00000523068 NETO1Q8TDF5 533 aa11.43□□□□□ -0.58
PVT1-216ENST00000523068 RTKNQ9BST9 563 aa11.43□□□□□ -0.58
PVT1-216ENST00000523068 ARRDC1-AS1Q9H2J1 176 aa11.43□□□□□ -0.58
PVT1-216ENST00000523068 MARCH2Q9P0N8 246 aa11.43□□□□□ -0.58
PVT1-216ENST00000523068 STARD13Q9Y3M8 1113 aa11.43□□□□□ -0.58
PVT1-216ENST00000523068 PCDHB4Q9Y5E5 795 aa11.43□□□□□ -0.58
PVT1-216ENST00000523068 PCDHGA5Q9Y5G8 931 aa11.43□□□□□ -0.58
PVT1-216ENST00000523068 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.43□□□□□ -0.58
PVT1-216ENST00000523068 SGK1O00141 431 aa11.42□□□□□ -0.58
PVT1-216ENST00000523068 O00370 1275 aa11.42□□□□□ -0.58
PVT1-216ENST00000523068 AFPP02771 609 aaKnown RBP11.42□□□□□ -0.58
PVT1-216ENST00000523068 STX17P56962 302 aa11.42□□□□□ -0.58
PVT1-216ENST00000523068 GCNT1Q02742 428 aa11.42□□□□□ -0.58
PVT1-216ENST00000523068 ADIGQ0VDE8 80 aa11.42□□□□□ -0.58
PVT1-216ENST00000523068 MESP2Q0VG99 397 aa11.42□□□□□ -0.58
PVT1-216ENST00000523068 PLK5Q496M5 336 aa11.42□□□□□ -0.58
PVT1-216ENST00000523068 SDE2Q6IQ49 451 aa11.42□□□□□ -0.58
PVT1-216ENST00000523068 LCLAT1Q6UWP7 414 aa11.42□□□□□ -0.58
PVT1-216ENST00000523068 TMEM92Q6UXU6 159 aa11.42□□□□□ -0.58
PVT1-216ENST00000523068 SFTPA1Q8IWL2 248 aa11.42□□□□□ -0.58
PVT1-216ENST00000523068 TRIM59Q8IWR1 403 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms