RNA–Protein interactions for RNA: ENST00000523054.5

CDKL3-209, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 2 BASIC

Gene CDKL3, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-209ENST00000523054 CCDC178Q5BJE1 867 aa4.8□□□□□ -1.64
CDKL3-209ENST00000523054 ANKRD34AQ69YU3 496 aa4.8□□□□□ -1.64
CDKL3-209ENST00000523054 FAAH2Q6GMR7 532 aa4.8□□□□□ -1.64
CDKL3-209ENST00000523054 FDX2Q6P4F2 183 aa4.8□□□□□ -1.64
CDKL3-209ENST00000523054 KCNV1Q6PIU1 500 aa4.8□□□□□ -1.64
CDKL3-209ENST00000523054 C1orf228Q6PIY5 440 aa4.8□□□□□ -1.64
CDKL3-209ENST00000523054 CCBE1Q6UXH8 406 aaPredicted RBP4.8□□□□□ -1.64
CDKL3-209ENST00000523054 ADAT2Q7Z6V5 191 aaKnown RBP4.8□□□□□ -1.64
CDKL3-209ENST00000523054 RTN4RL1Q86UN2 441 aaPredicted RBP4.8□□□□□ -1.64
CDKL3-209ENST00000523054 TRIM59Q8IWR1 403 aa4.8□□□□□ -1.64
CDKL3-209ENST00000523054 PHACTR4Q8IZ21 702 aa4.8□□□□□ -1.64
CDKL3-209ENST00000523054 VPS52Q8N1B4 723 aa4.8□□□□□ -1.64
CDKL3-209ENST00000523054 SLC39A11Q8N1S5 342 aa4.8□□□□□ -1.64
CDKL3-209ENST00000523054 LINC01465Q8N7H1 131 aa4.8□□□□□ -1.64
CDKL3-209ENST00000523054 TMEM145Q8NBT3 493 aa4.8□□□□□ -1.64
CDKL3-209ENST00000523054 ZNF248Q8NDW4 579 aa4.8□□□□□ -1.64
CDKL3-209ENST00000523054 FAM13CQ8NE31 585 aa4.8□□□□□ -1.64
CDKL3-209ENST00000523054 LINS1Q8NG48 757 aa4.8□□□□□ -1.64
CDKL3-209ENST00000523054 FRAT1Q92837 279 aaPredicted RBP4.8□□□□□ -1.64
CDKL3-209ENST00000523054 ELMO3Q96BJ8 720 aa4.8□□□□□ -1.64
CDKL3-209ENST00000523054 BAG1Q99933 345 aaPredicted RBP4.8□□□□□ -1.64
CDKL3-209ENST00000523054 TMPRSS13Q9BYE2 586 aa4.8□□□□□ -1.64
CDKL3-209ENST00000523054 ABCG4Q9H172 646 aa4.8□□□□□ -1.64
CDKL3-209ENST00000523054 SLC38A10Q9HBR0 1119 aa4.8□□□□□ -1.64
CDKL3-209ENST00000523054 RBM12Q9NTZ6 932 aaKnown RBP4.8□□□□□ -1.64
CDKL3-209ENST00000523054 C14orf119Q9NWQ9 140 aa4.8□□□□□ -1.64
CDKL3-209ENST00000523054 AATFQ9NY61 560 aaKnown RBP eCLIP4.8□□□□□ -1.64
CDKL3-209ENST00000523054 SAMD15Q9P1V8 674 aa4.8□□□□□ -1.64
CDKL3-209ENST00000523054 ZNF69Q9UC07 566 aa4.8□□□□□ -1.64
CDKL3-209ENST00000523054 ADGRE2Q9UHX3 823 aa4.8□□□□□ -1.64
CDKL3-209ENST00000523054 ITGB1BP2Q9UKP3 347 aa4.8□□□□□ -1.64
CDKL3-209ENST00000523054 DMTF1Q9Y222 760 aa4.8□□□□□ -1.64
CDKL3-209ENST00000523054 PIAS3Q9Y6X2 628 aa4.8□□□□□ -1.64
CDKL3-209ENST00000523054 PDCD11Q14690 1871 aaKnown RBP4.8□□□□□ -1.64
CDKL3-209ENST00000523054 MYH8P13535 1937 aa4.8□□□□□ -1.64
CDKL3-209ENST00000523054 PKD1L1Q8TDX9 2849 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 COL4A2P08572 1712 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 ABCA7Q8IZY2 2146 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 PTPDC1A2A3K4 754 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 MEGF11A6BM72 1044 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 SART1O43290 800 aaKnown RBP4.79□□□□□ -1.64
CDKL3-209ENST00000523054 EXTL3O43909 919 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 ECI2O75521 394 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 CHRNA1P02708 482 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 CFIP05156 583 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 GNAT1P11488 350 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 TYRP1P17643 537 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 CCND1P24385 295 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 PBX3P40426 434 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 NSUN2Q08J23 767 aaKnown RBP eCLIP4.79□□□□□ -1.64
CDKL3-209ENST00000523054 PDCD2Q16342 344 aaPredicted RBP4.79□□□□□ -1.64
CDKL3-209ENST00000523054 NKG7Q16617 165 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 MUM1Q2TAK8 710 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 ATP13A4Q4VNC1 1196 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 ZNF449Q6P9G9 518 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 LVRNQ6Q4G3 990 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 UBE2R2Q712K3 238 aaPredicted RBP4.79□□□□□ -1.64
CDKL3-209ENST00000523054 CHST3Q7LGC8 479 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 SRLQ86TD4 932 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 RBM12BQ8IXT5 1001 aaKnown RBP4.79□□□□□ -1.64
CDKL3-209ENST00000523054 ARMC10Q8N2F6 343 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 CAMKK1Q8N5S9 505 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 BAHD1Q8TBE0 780 aaPredicted RBP4.79□□□□□ -1.64
CDKL3-209ENST00000523054 UTP4Q969X6 686 aaKnown RBP4.79□□□□□ -1.64
CDKL3-209ENST00000523054 NACC2Q96BF6 587 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 HSPBAP1Q96EW2 488 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 MSANTD3Q96H12 275 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 TMEM169Q96HH4 297 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 AHCYL2Q96HN2 611 aaKnown RBP4.79□□□□□ -1.64
CDKL3-209ENST00000523054 FAM46AQ96IP4 442 aaKnown RBP4.79□□□□□ -1.64
CDKL3-209ENST00000523054 AIFM3Q96NN9 605 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 CORO1BQ9BR76 489 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 SLC39A3Q9BRY0 314 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 HERPUD2Q9BSE4 406 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 MAK16Q9BXY0 300 aaKnown RBP4.79□□□□□ -1.64
CDKL3-209ENST00000523054 NACA2Q9H009 215 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 BRD9Q9H8M2 597 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 RIC8AQ9NPQ8 531 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 KRT82Q9NSB4 513 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 ZNHIT6Q9NWK9 470 aaKnown RBP4.79□□□□□ -1.64
CDKL3-209ENST00000523054 CYP39A1Q9NYL5 469 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 SEL1LQ9UBV2 794 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 RCAN3Q9UKA8 241 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 CFAP45Q9UL16 551 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 HIF3AQ9Y2N7 669 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 GIT1Q9Y2X7 761 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 CSPG4Q6UVK1 2322 aa4.79□□□□□ -1.64
CDKL3-209ENST00000523054 SMTNL1A8MU46 457 aa4.78□□□□□ -1.64
CDKL3-209ENST00000523054 DYNC1I1O14576 645 aa4.78□□□□□ -1.64
CDKL3-209ENST00000523054 SGTAO43765 313 aa4.78□□□□□ -1.64
CDKL3-209ENST00000523054 EIF4EBP3O60516 100 aaPredicted RBP4.78□□□□□ -1.64
CDKL3-209ENST00000523054 SIX3O95343 332 aaPredicted RBP4.78□□□□□ -1.64
CDKL3-209ENST00000523054 HARSP12081 509 aaKnown RBP4.78□□□□□ -1.64
CDKL3-209ENST00000523054 IDEP14735 1019 aa4.78□□□□□ -1.64
CDKL3-209ENST00000523054 CD247P20963 164 aa4.78□□□□□ -1.64
CDKL3-209ENST00000523054 CCNE1P24864 410 aa4.78□□□□□ -1.64
CDKL3-209ENST00000523054 PPM1FP49593 454 aaPredicted RBP4.78□□□□□ -1.64
CDKL3-209ENST00000523054 RENBPP51606 427 aa4.78□□□□□ -1.64
CDKL3-209ENST00000523054 INHBCP55103 352 aa4.78□□□□□ -1.64
CDKL3-209ENST00000523054 ARHGAP1Q07960 439 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms