RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 SPHK2Q9NRA0 654 aa17.17■□□□□ 0.34
PABPC1-221ENST00000522720 OLA1Q9NTK5 396 aaKnown RBP17.17■□□□□ 0.34
PABPC1-221ENST00000522720 MARCH2Q9P0N8 246 aa17.17■□□□□ 0.34
PABPC1-221ENST00000522720 RASAL2Q9UJF2 1139 aa17.17■□□□□ 0.34
PABPC1-221ENST00000522720 STRIP2Q9ULQ0 834 aa17.17■□□□□ 0.34
PABPC1-221ENST00000522720 VPS13AQ96RL7 3174 aa17.16■□□□□ 0.34
PABPC1-221ENST00000522720 LRRC10BA6NIK2 292 aa17.16■□□□□ 0.34
PABPC1-221ENST00000522720 PIK3R2O00459 728 aa17.16■□□□□ 0.34
PABPC1-221ENST00000522720 HOXC11O43248 304 aaPredicted RBP17.16■□□□□ 0.34
PABPC1-221ENST00000522720 FBXO21O94952 628 aa17.16■□□□□ 0.34
PABPC1-221ENST00000522720 ADH5P11766 374 aa17.16■□□□□ 0.34
PABPC1-221ENST00000522720 ZNF18P17022 549 aa17.16■□□□□ 0.34
PABPC1-221ENST00000522720 HOXD11P31277 338 aaPredicted RBP17.16■□□□□ 0.34
PABPC1-221ENST00000522720 CLCN1P35523 988 aa17.16■□□□□ 0.34
PABPC1-221ENST00000522720 EIF2DP41214 584 aaKnown RBP17.16■□□□□ 0.34
PABPC1-221ENST00000522720 ACADSBP45954 432 aa17.16■□□□□ 0.34
PABPC1-221ENST00000522720 PPP2R5DQ14738 602 aa17.16■□□□□ 0.34
PABPC1-221ENST00000522720 Q6ZNB5 142 aa17.16■□□□□ 0.34
PABPC1-221ENST00000522720 TMEM25Q86YD3 366 aa17.16■□□□□ 0.34
PABPC1-221ENST00000522720 FAM71AQ8IYT1 594 aa17.16■□□□□ 0.34
PABPC1-221ENST00000522720 RNF139Q8WU17 664 aa17.16■□□□□ 0.34
PABPC1-221ENST00000522720 EDEM1Q92611 657 aa17.16■□□□□ 0.34
PABPC1-221ENST00000522720 EZH1Q92800 747 aaPredicted RBP17.16■□□□□ 0.34
PABPC1-221ENST00000522720 NELL1Q92832 810 aa17.16■□□□□ 0.34
PABPC1-221ENST00000522720 NAA15Q9BXJ9 866 aaKnown RBP17.16■□□□□ 0.34
PABPC1-221ENST00000522720 SLC4A5Q9BY07 1137 aa17.16■□□□□ 0.34
PABPC1-221ENST00000522720 NAT10Q9H0A0 1025 aaKnown RBP17.16■□□□□ 0.34
PABPC1-221ENST00000522720 PLCB1Q9NQ66 1216 aa17.16■□□□□ 0.34
PABPC1-221ENST00000522720 ABCC13Q9NSE7 274 aa17.16■□□□□ 0.34
PABPC1-221ENST00000522720 LIMA1Q9UHB6 759 aaKnown RBP17.16■□□□□ 0.34
PABPC1-221ENST00000522720 PAPSS2O95340 614 aaPredicted RBP17.15■□□□□ 0.34
PABPC1-221ENST00000522720 KLKB1P03952 638 aa17.15■□□□□ 0.34
PABPC1-221ENST00000522720 TDGF1P13385 188 aa17.15■□□□□ 0.34
PABPC1-221ENST00000522720 UCHL3P15374 230 aa17.15■□□□□ 0.34
PABPC1-221ENST00000522720 SLC6A11P48066 632 aa17.15■□□□□ 0.34
PABPC1-221ENST00000522720 MRE11P49959 708 aa17.15■□□□□ 0.34
PABPC1-221ENST00000522720 COPB1P53618 953 aaKnown RBP17.15■□□□□ 0.34
PABPC1-221ENST00000522720 BPIFB4P59827 614 aa17.15■□□□□ 0.34
PABPC1-221ENST00000522720 SATB1Q01826 763 aa17.15■□□□□ 0.34
PABPC1-221ENST00000522720 GAD2Q05329 585 aa17.15■□□□□ 0.34
PABPC1-221ENST00000522720 DRAP1Q14919 205 aaPredicted RBP17.15■□□□□ 0.34
PABPC1-221ENST00000522720 KLHL40Q2TBA0 621 aa17.15■□□□□ 0.34
PABPC1-221ENST00000522720 TSSK4Q6SA08 328 aa17.15■□□□□ 0.34
PABPC1-221ENST00000522720 TMEM110Q86TL2 294 aa17.15■□□□□ 0.34
PABPC1-221ENST00000522720 SCUBE3Q8IX30 993 aa17.15■□□□□ 0.34
PABPC1-221ENST00000522720 ANKRD20A12PQ8NF67 263 aa17.15■□□□□ 0.34
PABPC1-221ENST00000522720 LSM14BQ9BX40 385 aaKnown RBP17.15■□□□□ 0.34
PABPC1-221ENST00000522720 FAM126AQ9BYI3 521 aaPredicted RBP17.15■□□□□ 0.34
PABPC1-221ENST00000522720 DCLK3Q9C098 648 aa17.15■□□□□ 0.34
PABPC1-221ENST00000522720 MIS12Q9H081 205 aa17.15■□□□□ 0.34
PABPC1-221ENST00000522720 HSD3B7Q9H2F3 369 aa17.15■□□□□ 0.34
PABPC1-221ENST00000522720 ST7Q9NRC1 585 aa17.15■□□□□ 0.34
PABPC1-221ENST00000522720 PCDHGC3Q9UN70 934 aa17.15■□□□□ 0.34
PABPC1-221ENST00000522720 ZNF510Q9Y2H8 683 aa17.15■□□□□ 0.34
PABPC1-221ENST00000522720 FHOD1Q9Y613 1164 aa17.15■□□□□ 0.34
PABPC1-221ENST00000522720 R4GN57 208 aa17.15■□□□□ 0.34
PABPC1-221ENST00000522720 MYO15AQ9UKN7 3530 aa17.14■□□□□ 0.34
PABPC1-221ENST00000522720 MYO18AQ92614 2054 aaKnown RBP17.14■□□□□ 0.33
PABPC1-221ENST00000522720 PTPRZ1P23471 2315 aaPredicted RBP17.14■□□□□ 0.33
PABPC1-221ENST00000522720 A0A0A0MRY4 1105 aa17.14■□□□□ 0.33
PABPC1-221ENST00000522720 SLC12A8A0AV02 714 aa17.14■□□□□ 0.33
PABPC1-221ENST00000522720 CHURC1-FNTBB4DL54 471 aa17.14■□□□□ 0.33
PABPC1-221ENST00000522720 SART1O43290 800 aaKnown RBP17.14■□□□□ 0.33
PABPC1-221ENST00000522720 ATG13O75143 517 aa17.14■□□□□ 0.33
PABPC1-221ENST00000522720 RNF40O75150 1001 aa17.14■□□□□ 0.33
PABPC1-221ENST00000522720 LTFP02788 710 aa17.14■□□□□ 0.33
PABPC1-221ENST00000522720 HMBSP08397 361 aa17.14■□□□□ 0.33
PABPC1-221ENST00000522720 PNMA6AP0CW24 399 aaPredicted RBP17.14■□□□□ 0.33
PABPC1-221ENST00000522720 CDK11BP21127 795 aaKnown RBP17.14■□□□□ 0.33
PABPC1-221ENST00000522720 RAPGEF1Q13905 1077 aa17.14■□□□□ 0.33
PABPC1-221ENST00000522720 ANO6Q4KMQ2 910 aa17.14■□□□□ 0.33
PABPC1-221ENST00000522720 FKBP15Q5T1M5 1219 aa17.14■□□□□ 0.33
PABPC1-221ENST00000522720 MSANTD2Q6P1R3 559 aa17.14■□□□□ 0.33
PABPC1-221ENST00000522720 PKN3Q6P5Z2 889 aa17.14■□□□□ 0.33
PABPC1-221ENST00000522720 ZC3H14Q6PJT7 736 aaKnown RBP17.14■□□□□ 0.33
PABPC1-221ENST00000522720 ALYREFQ86V81 257 aaKnown RBP17.14■□□□□ 0.33
PABPC1-221ENST00000522720 SLC47A2Q86VL8 602 aa17.14■□□□□ 0.33
PABPC1-221ENST00000522720 ETFBKMTQ8IXQ9 262 aa17.14■□□□□ 0.33
PABPC1-221ENST00000522720 AOPEPQ8N6M6 819 aa17.14■□□□□ 0.33
PABPC1-221ENST00000522720 CLEC4CQ8WTT0 213 aa17.14■□□□□ 0.33
PABPC1-221ENST00000522720 GOLGA1Q92805 767 aa17.14■□□□□ 0.33
PABPC1-221ENST00000522720 PNKPQ96T60 521 aa17.14■□□□□ 0.33
PABPC1-221ENST00000522720 BPIFA3Q9BQP9 254 aa17.14■□□□□ 0.33
PABPC1-221ENST00000522720 STK33Q9BYT3 514 aa17.14■□□□□ 0.33
PABPC1-221ENST00000522720 LHX5Q9H2C1 402 aa17.14■□□□□ 0.33
PABPC1-221ENST00000522720 SEMA4AQ9H3S1 761 aa17.14■□□□□ 0.33
PABPC1-221ENST00000522720 C2orf42Q9NWW7 574 aa17.14■□□□□ 0.33
PABPC1-221ENST00000522720 CYTH4Q9UIA0 394 aa17.14■□□□□ 0.33
PABPC1-221ENST00000522720 HBS1LQ9Y450 684 aaKnown RBP17.14■□□□□ 0.33
PABPC1-221ENST00000522720 FAM186AA6NE01 2351 aa17.13■□□□□ 0.33
PABPC1-221ENST00000522720 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.13■□□□□ 0.33
PABPC1-221ENST00000522720 CORO1AP31146 461 aaKnown RBP17.13■□□□□ 0.33
PABPC1-221ENST00000522720 NRLP54845 237 aa17.13■□□□□ 0.33
PABPC1-221ENST00000522720 TRIP4Q15650 581 aaPredicted RBP17.13■□□□□ 0.33
PABPC1-221ENST00000522720 ANO4Q32M45 955 aa17.13■□□□□ 0.33
PABPC1-221ENST00000522720 C12orf40Q86WS4 652 aa17.13■□□□□ 0.33
PABPC1-221ENST00000522720 FMNL3Q8IVF7 1028 aa17.13■□□□□ 0.33
PABPC1-221ENST00000522720 WDTC1Q8N5D0 677 aa17.13■□□□□ 0.33
PABPC1-221ENST00000522720 ZBTB44Q8NCP5 570 aa17.13■□□□□ 0.33
PABPC1-221ENST00000522720 CCDC26Q8TAB7 109 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms