RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 ZNF461Q8TAF7 563 aa11.46□□□□□ -0.57
MRPS28-208ENST00000521605 ANKRD36BP1Q96IX9 119 aa11.46□□□□□ -0.57
MRPS28-208ENST00000521605 VCPIP1Q96JH7 1222 aa11.46□□□□□ -0.57
MRPS28-208ENST00000521605 ZC3H10Q96K80 434 aaKnown RBP11.46□□□□□ -0.57
MRPS28-208ENST00000521605 ZNF512Q96ME7 567 aaPredicted RBP11.46□□□□□ -0.57
MRPS28-208ENST00000521605 HHIPQ96QV1 700 aa11.46□□□□□ -0.57
MRPS28-208ENST00000521605 ADPGKQ9BRR6 497 aa11.46□□□□□ -0.57
MRPS28-208ENST00000521605 DUSP15Q9H1R2 295 aaPredicted RBP11.46□□□□□ -0.57
MRPS28-208ENST00000521605 PDZD7Q9H5P4 517 aa11.46□□□□□ -0.57
MRPS28-208ENST00000521605 RPF1Q9H9Y2 349 aaKnown RBP11.46□□□□□ -0.57
MRPS28-208ENST00000521605 TOPORSQ9NS56 1045 aaPredicted RBP11.46□□□□□ -0.57
MRPS28-208ENST00000521605 LCMT1Q9UIC8 334 aa11.46□□□□□ -0.57
MRPS28-208ENST00000521605 SALL4Q9UJQ4 1053 aa11.46□□□□□ -0.57
MRPS28-208ENST00000521605 NEUROG3Q9Y4Z2 214 aa11.46□□□□□ -0.57
MRPS28-208ENST00000521605 BACE2Q9Y5Z0 518 aa11.46□□□□□ -0.57
MRPS28-208ENST00000521605 IGSF10Q6WRI0 2623 aa11.45□□□□□ -0.58
MRPS28-208ENST00000521605 PTPRJQ12913 1337 aa11.45□□□□□ -0.58
MRPS28-208ENST00000521605 GRID2IPA4D2P6 1211 aa11.45□□□□□ -0.58
MRPS28-208ENST00000521605 EIF4E1BA6NMX2 242 aaKnown RBP11.45□□□□□ -0.58
MRPS28-208ENST00000521605 TTLL13PA6NNM8 815 aa11.45□□□□□ -0.58
MRPS28-208ENST00000521605 PATE3B3GLJ2 98 aa11.45□□□□□ -0.58
MRPS28-208ENST00000521605 RECQL4O94761 1208 aa11.45□□□□□ -0.58
MRPS28-208ENST00000521605 MICAL2O94851 1124 aa11.45□□□□□ -0.58
MRPS28-208ENST00000521605 TNNC2P02585 160 aa11.45□□□□□ -0.58
MRPS28-208ENST00000521605 ATP1A1P05023 1023 aaKnown RBP11.45□□□□□ -0.58
MRPS28-208ENST00000521605 CHRNB2P17787 502 aa11.45□□□□□ -0.58
MRPS28-208ENST00000521605 GBP1P32455 592 aa11.45□□□□□ -0.58
MRPS28-208ENST00000521605 CLCNKBP51801 687 aa11.45□□□□□ -0.58
MRPS28-208ENST00000521605 GALCP54803 685 aa11.45□□□□□ -0.58
MRPS28-208ENST00000521605 NOP14P78316 857 aaKnown RBP11.45□□□□□ -0.58
MRPS28-208ENST00000521605 TWF1Q12792 350 aa11.45□□□□□ -0.58
MRPS28-208ENST00000521605 BIRC3Q13489 604 aa11.45□□□□□ -0.58
MRPS28-208ENST00000521605 TMEM132AQ24JP5 1023 aa11.45□□□□□ -0.58
MRPS28-208ENST00000521605 COL28A1Q2UY09 1125 aa11.45□□□□□ -0.58
MRPS28-208ENST00000521605 MEI1Q5TIA1 1274 aa11.45□□□□□ -0.58
MRPS28-208ENST00000521605 C11orf63Q6NUN7 778 aa11.45□□□□□ -0.58
MRPS28-208ENST00000521605 MSANTD4Q8NCY6 345 aa11.45□□□□□ -0.58
MRPS28-208ENST00000521605 TPCN2Q8NHX9 752 aa11.45□□□□□ -0.58
MRPS28-208ENST00000521605 TLR10Q9BXR5 811 aa11.45□□□□□ -0.58
MRPS28-208ENST00000521605 NIF3L1Q9GZT8 377 aa11.45□□□□□ -0.58
MRPS28-208ENST00000521605 TRPV4Q9HBA0 871 aa11.45□□□□□ -0.58
MRPS28-208ENST00000521605 ABCB6Q9NP58 842 aa11.45□□□□□ -0.58
MRPS28-208ENST00000521605 ASAH2Q9NR71 780 aa11.45□□□□□ -0.58
MRPS28-208ENST00000521605 UVRAGQ9P2Y5 699 aa11.45□□□□□ -0.58
MRPS28-208ENST00000521605 GTF3C4Q9UKN8 822 aa11.45□□□□□ -0.58
MRPS28-208ENST00000521605 INVSQ9Y283 1065 aa11.45□□□□□ -0.58
MRPS28-208ENST00000521605 MSRB2Q9Y3D2 182 aa11.45□□□□□ -0.58
MRPS28-208ENST00000521605 GPSM3Q9Y4H4 160 aa11.45□□□□□ -0.58
MRPS28-208ENST00000521605 EML5Q05BV3 1969 aa11.45□□□□□ -0.58
MRPS28-208ENST00000521605 CCDC163A0A0D9SF12 145 aa11.44□□□□□ -0.58
MRPS28-208ENST00000521605 SPAARA0A1B0GVQ0 90 aa11.44□□□□□ -0.58
MRPS28-208ENST00000521605 A0A1W2PRU2 124 aa11.44□□□□□ -0.58
MRPS28-208ENST00000521605 BCLAF3A2AJT9 711 aaKnown RBP11.44□□□□□ -0.58
MRPS28-208ENST00000521605 TARSL2A2RTX5 802 aaKnown RBP11.44□□□□□ -0.58
MRPS28-208ENST00000521605 KHNYNO15037 678 aaKnown RBP11.44□□□□□ -0.58
MRPS28-208ENST00000521605 RHOBTB1O94844 696 aa11.44□□□□□ -0.58
MRPS28-208ENST00000521605 ABLIM3O94929 683 aa11.44□□□□□ -0.58
MRPS28-208ENST00000521605 MOCS3O95396 460 aa11.44□□□□□ -0.58
MRPS28-208ENST00000521605 LSM8O95777 96 aaKnown RBP11.44□□□□□ -0.58
MRPS28-208ENST00000521605 TMEM191BP0C7N4 346 aa11.44□□□□□ -0.58
MRPS28-208ENST00000521605 ATF2P15336 505 aa11.44□□□□□ -0.58
MRPS28-208ENST00000521605 H2AFXP16104 143 aaPredicted RBP11.44□□□□□ -0.58
MRPS28-208ENST00000521605 MCM3P25205 808 aa11.44□□□□□ -0.58
MRPS28-208ENST00000521605 WNT7BP56706 349 aa11.44□□□□□ -0.58
MRPS28-208ENST00000521605 FMO1Q01740 532 aa11.44□□□□□ -0.58
MRPS28-208ENST00000521605 TNK2Q07912 1038 aa11.44□□□□□ -0.58
MRPS28-208ENST00000521605 STXBP5Q5T5C0 1151 aa11.44□□□□□ -0.58
MRPS28-208ENST00000521605 EEF1DP3Q658K8 133 aa11.44□□□□□ -0.58
MRPS28-208ENST00000521605 NOP9Q86U38 636 aaKnown RBP11.44□□□□□ -0.58
MRPS28-208ENST00000521605 PROSER1Q86XN7 944 aa11.44□□□□□ -0.58
MRPS28-208ENST00000521605 TCEAL8Q8IYN2 117 aa11.44□□□□□ -0.58
MRPS28-208ENST00000521605 SYNPOQ8N3V7 929 aa11.44□□□□□ -0.58
MRPS28-208ENST00000521605 C3orf58Q8NDZ4 430 aa11.44□□□□□ -0.58
MRPS28-208ENST00000521605 OR5B17Q8NGF7 314 aa11.44□□□□□ -0.58
MRPS28-208ENST00000521605 SHKBP1Q8TBC3 707 aa11.44□□□□□ -0.58
MRPS28-208ENST00000521605 TATDN2Q93075 761 aa11.44□□□□□ -0.58
MRPS28-208ENST00000521605 PBKQ96KB5 322 aa11.44□□□□□ -0.58
MRPS28-208ENST00000521605 OSBPL9Q96SU4 736 aa11.44□□□□□ -0.58
MRPS28-208ENST00000521605 PACSIN1Q9BY11 444 aa11.44□□□□□ -0.58
MRPS28-208ENST00000521605 ZNF518BQ9C0D4 1074 aa11.44□□□□□ -0.58
MRPS28-208ENST00000521605 XYLT2Q9H1B5 865 aa11.44□□□□□ -0.58
MRPS28-208ENST00000521605 CYP3A43Q9HB55 503 aa11.44□□□□□ -0.58
MRPS28-208ENST00000521605 GOLGA2P5Q9HBQ8 144 aa11.44□□□□□ -0.58
MRPS28-208ENST00000521605 ITGA11Q9UKX5 1188 aa11.44□□□□□ -0.58
MRPS28-208ENST00000521605 TTC7AQ9ULT0 858 aaPredicted RBP11.44□□□□□ -0.58
MRPS28-208ENST00000521605 TULP1O00294 542 aaPredicted RBP11.43□□□□□ -0.58
MRPS28-208ENST00000521605 DPYSL4O14531 572 aa11.43□□□□□ -0.58
MRPS28-208ENST00000521605 CDX4O14627 284 aaPredicted RBP11.43□□□□□ -0.58
MRPS28-208ENST00000521605 CYP26A1O43174 497 aa11.43□□□□□ -0.58
MRPS28-208ENST00000521605 TRAPPC3O43617 180 aa11.43□□□□□ -0.58
MRPS28-208ENST00000521605 PHACTR2O75167 634 aa11.43□□□□□ -0.58
MRPS28-208ENST00000521605 PALMO75781 387 aa11.43□□□□□ -0.58
MRPS28-208ENST00000521605 CYP1A1P04798 512 aaPredicted RBP11.43□□□□□ -0.58
MRPS28-208ENST00000521605 CYP1A2P05177 515 aa11.43□□□□□ -0.58
MRPS28-208ENST00000521605 PNMA6AP0CW24 399 aaPredicted RBP11.43□□□□□ -0.58
MRPS28-208ENST00000521605 P4HA1P13674 534 aa11.43□□□□□ -0.58
MRPS28-208ENST00000521605 TNFSF9P41273 254 aa11.43□□□□□ -0.58
MRPS28-208ENST00000521605 CENPCQ03188 943 aa11.43□□□□□ -0.58
MRPS28-208ENST00000521605 FCHO2Q0JRZ9 810 aa11.43□□□□□ -0.58
MRPS28-208ENST00000521605 TRPC3Q13507 836 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms