RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 ITIH6Q6UXX5 1313 aa3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 TRIAP1O43715 76 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 AKAP8O43823 692 aaKnown RBP3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 HEXIM1O94992 359 aaKnown RBP3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 SCAF4O95104 1147 aaKnown RBP3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 MBPP02686 304 aaPredicted RBP3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 CENPBP07199 599 aaPredicted RBP3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 LDHCP07864 332 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 PPP3CBP16298 524 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 ZNF20P17024 532 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 ACRV1P26436 265 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 ELF1P32519 619 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 LIPAP38571 399 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 CASP2P42575 452 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 AARSP49588 968 aaKnown RBP eCLIP3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 CCT4P50991 539 aaKnown RBP3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 PAPOLAP51003 745 aaKnown RBP3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 RESTQ13127 1097 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 DLGAP5Q15398 846 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 DEPDC1Q5TB30 811 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 KIAA0895LQ68EN5 471 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 CFAP161Q6P656 301 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 VWA1Q6PCB0 445 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 C16orf89Q6UX73 402 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 SYT13Q7L8C5 426 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 GPR149Q86SP6 731 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 TICAM2Q86XR7 235 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 LNX2Q8N448 690 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 C11orf44Q8N8P7 122 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 IL17DQ8TAD2 202 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 SLC2A12Q8TD20 617 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 OSCP1Q8WVF1 389 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 WDR60Q8WVS4 1066 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 RFFLQ8WZ73 363 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 NPIPB3Q92617 1050 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 RUBCNQ92622 972 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 GLG1Q92896 1179 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 RFKQ969G6 155 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 GRAMD1AQ96CP6 724 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 KAZALD1Q96I82 304 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 C1QTNF3Q9BXJ4 246 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 SLC26A6Q9BXS9 759 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 ELAC1Q9H777 363 aaKnown RBP3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 CHODLQ9H9P2 273 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 BLOC1S4Q9NUP1 217 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 EIF2B4Q9UI10 523 aaKnown RBP3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 DERAQ9Y315 318 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 PCDHB7Q9Y5E2 793 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 ZNF536O15090 1300 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 ADGRA2Q96PE1 1338 aa3.93□□□□□ -1.78
HMGN1P28-201ENST00000521340 A1L4Q6 167 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 VWA3AA6NCI4 1184 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 A8MVJ9 347 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 EFCAB8A8MWE9 144 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 C1QTNF3-AMACRE9PGA6 284 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 F5H0A9 414 aaPredicted RBP3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 EXOC5O00471 708 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 RNASET2O00584 256 aaKnown RBP3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 BAIAP3O94812 1187 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 WDR47O94967 919 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 TJP3O95049 919 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 SPDEFO95238 335 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 DDX58O95786 925 aaKnown RBP3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 TBX18O95935 607 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 CYP3A4P08684 503 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 TGM1P22735 817 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 SERPINA4P29622 427 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 PRKAR1BP31321 381 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 ZXDAP98168 799 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 HHEXQ03014 270 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 DEUP1Q05D60 604 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 SF3A3Q12874 501 aaKnown RBP eCLIP3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 MAPK7Q13164 816 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 TRPC3Q13507 836 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 DNASE1L3Q13609 305 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 CSHL1Q14406 222 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 CDSNQ15517 529 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 ZNF484Q5JVG2 852 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 WDR45BQ5MNZ6 344 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 DGAT2L7PQ6IED9 249 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 MZT2BQ6NZ67 158 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 FOXR2Q6PJQ5 311 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 TMEM57Q8N5G2 664 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 OVCA2Q8WZ82 227 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 ST8SIA4Q92187 359 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 CENPIQ92674 756 aaPredicted RBP3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 HVCN1Q96D96 273 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 MYEOVQ96EZ4 313 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 TRMT61AQ96FX7 289 aaKnown RBP3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 FAM89AQ96GI7 184 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 C8orf49Q96NF6 230 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 ACTRT3Q9BYD9 372 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 ALOXE3Q9BYJ1 711 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 GPR63Q9BZJ6 419 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 ZHX3Q9H4I2 956 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 JMJD4Q9H9V9 463 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 NDUFAF4Q9P032 175 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 RNF181Q9P0P0 153 aa3.92□□□□□ -1.78
HMGN1P28-201ENST00000521340 SEMA5BQ9P283 1151 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms