RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 ACTL9Q8TC94 416 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 HASPINQ8TF76 798 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 LENG9Q96B70 501 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 ADARB2Q9NS39 739 aaKnown RBP11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 IRAK4Q9NWZ3 460 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 TAF1P21675 1872 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 DPPA5A6NC42 116 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 LIASO43766 372 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 MTA2O94776 668 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 POLBP06746 335 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 DSG3P32926 999 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 SLC1A5Q15758 541 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 CGRRF1Q99675 332 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 AHCYL1O43865 530 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 SMNDC1O75940 238 aaKnown RBP eCLIP11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 STIP1P31948 543 aaKnown RBP11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 CDH8P55286 799 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 CDK16Q00536 496 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 RAD51Q06609 339 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 TWF1Q12792 350 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 ZNF606Q8WXB4 792 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 OXNAD1Q96HP4 312 aaPredicted RBP11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 GLT1D1Q96MS3 346 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 SHCBP1LQ9BZQ2 653 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 RNF19AQ9NV58 838 aa11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.2□□□□□ -0.62
PCDHGA1-202ENST00000517417 MGEA5O60502 916 aa11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 IRF1P10914 325 aa11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 GTF2BQ00403 316 aa11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 NBPF20Q3BBV1 942 aa11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 ICA1LQ8NDH6 482 aa11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 ZSWIM2Q8NEG5 633 aa11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 GIPC2Q8TF65 315 aa11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 FAM172AQ8WUF8 416 aa11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 OPTNQ96CV9 577 aa11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 APOL2Q9BQE5 337 aa11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 DRC3Q9H069 523 aa11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 NMRK1Q9NWW6 199 aa11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 SLC39A10Q9ULF5 831 aa11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 COL4A1P02462 1669 aa11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 PRRG1O14668 218 aa11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 WDR4P57081 412 aaKnown RBP11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 MAMLD1Q13495 774 aa11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 IFNEQ86WN2 208 aa11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 MROH8Q9H579 483 aa11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 DENND2DQ9H6A0 471 aaPredicted RBP11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 ARHGEF38Q9NXL2 777 aa11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 NKX1-2Q9UD57 310 aaPredicted RBP11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 TIMM13Q9Y5L4 95 aaPredicted RBP11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 MYH7BA7E2Y1 1941 aa11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 ESRRBO95718 433 aa11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 ALADP13716 330 aa11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 SPRP35270 261 aaPredicted RBP11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 CPT1AP50416 773 aa11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 C1QBPQ07021 282 aaKnown RBP11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 CHSY1Q86X52 802 aa11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 ELMO2Q96JJ3 720 aa11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 EPB41L4BQ9H329 900 aa11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 WDCPQ9H6R7 721 aa11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 LATS2Q9NRM7 1088 aa11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 RPS6KL1Q9Y6S9 549 aa11.19□□□□□ -0.62
PCDHGA1-202ENST00000517417 VDRP11473 427 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 ENO3P13929 434 aaPredicted RBP11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 EPHX2P34913 555 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 AQP5P55064 265 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 PTPN11Q06124 597 aaPredicted RBP11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 FASTKD3Q14CZ7 662 aaKnown RBP11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 TRIP10Q15642 601 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 ZNF484Q5JVG2 852 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 C10orf120Q5SQS8 335 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 MFN1Q8IWA4 741 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 RXFP2Q8WXD0 754 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 ABTB1Q969K4 478 aaPredicted RBP11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 SLITRK1Q96PX8 696 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 ANKRD36CQ5JPF3 1778 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 IGLV3-22A0A075B6J6 115 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 C17orf102A2RUQ5 167 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 SPAG6O75602 509 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 MAP4K3Q8IVH8 894 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 ALLCQ8N6M5 410 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 DACT3Q96B18 629 aaPredicted RBP11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 BORCS6Q96GS4 357 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 GPR88Q9GZN0 384 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 SAE1Q9UBE0 346 aaPredicted RBP11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 hCG_2014768A0A024R1R8 64 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 ADM5C9JUS6 153 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 F8VP50 259 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 F8W8V4 182 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 SMAPO00193 183 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 PRPF4O43172 522 aaKnown RBP eCLIP11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 CYP2C8P10632 490 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 GTF2A2P52657 109 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 UGP2Q16851 508 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 DENND5BQ6ZUT9 1274 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 PLEKHH3Q7Z736 793 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 CLNKQ7Z7G1 428 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 RFWD2Q8NHY2 731 aa11.18□□□□□ -0.62
PCDHGA1-202ENST00000517417 PPP1R13LQ8WUF5 828 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms