RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 SLTMQ9NWH9 1034 aaKnown RBP eCLIP-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 OCIAD1Q9NX40 245 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 VSX1Q9NZR4 365 aaPredicted RBP-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 RASAL2Q9UJF2 1139 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 HDAC9Q9UKV0 1011 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 PCDHB10Q9UN67 800 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 GNEQ9Y223 722 aaKnown RBP-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 MRVI1Q9Y6F6 885 aa-0.53□□□□□ -2.49
RNU6-1238P-201ENST00000517215 MYO10Q9HD67 2058 aa-0.53□□□□□ -2.5
RNU6-1238P-201ENST00000517215 NLRC5Q86WI3 1866 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 FAM205AQ6ZU69 1335 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 ZNF335Q9H4Z2 1342 aaPredicted RBP-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 A0A087X002 238 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 C1orf226A1L170 272 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 CFAP69A5D8W1 941 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 CDHR4A6H8M9 788 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 SERPINE3A8MV23 424 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 BECN2A8MW95 431 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 HHLA1C9JL84 531 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 BLOC1S5-TXNDC5H3BN57 136 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 PSMD14O00487 310 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 SCDO00767 359 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 KCNK3O14649 394 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 MDM4O15151 490 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 INPPL1O15357 1258 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 PRPF4O43172 522 aaKnown RBP eCLIP-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 PCDH7O60245 1069 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 TLR5O60602 858 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 CTNND1O60716 968 aaKnown RBP-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 KCNJ13O60928 360 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 KDM4BO94953 1096 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 KIF20AO95235 890 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 MT-CO3P00414 261 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 IGLV3-19P01714 112 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 CYP1A2P05177 515 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 DLDP09622 509 aaKnown RBP-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 LTA4HP09960 611 aaKnown RBP-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 CETPP11597 493 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 MYCLP12524 364 aaPredicted RBP-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 PHKG2P15735 406 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 KLK2P20151 261 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 KCNA5P22460 613 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 FPR3P25089 353 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 TACR3P29371 465 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 TPTEP56180 551 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 TNFAIP2Q03169 654 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 KHDRBS1Q07666 443 aaKnown RBP eCLIP-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 SPOCK1Q08629 439 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 APOBRQ0VD83 1088 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 TRAF3Q13114 568 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 SP140Q13342 867 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 RAPSNQ13702 412 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 ITGA9Q13797 1035 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 MYBPC3Q14896 1274 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 TMEM132BQ14DG7 1078 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 CRY1Q16526 586 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 SMTNL2Q2TAL5 461 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 FLYWCH1Q4VC44 716 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 AWAT1Q58HT5 328 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 CCDC178Q5BJE1 867 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 RNASE12Q5GAN4 147 aaKnown RBP-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 TFDP3Q5H9I0 405 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 DNTTIP2Q5QJE6 756 aaKnown RBP-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 TTC39AQ5SRH9 613 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 TREML2Q5T2D2 321 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 TMEM63BQ5T3F8 832 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 GJC2Q5T442 439 aaPredicted RBP-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 OTUD1Q5VV17 481 aaPredicted RBP-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 HIBCHQ6NVY1 386 aaPredicted RBP-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 ZNF529Q6P280 563 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 FBXO46Q6PJ61 603 aaPredicted RBP-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 TRIM65Q6PJ69 517 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 DOK6Q6PKX4 331 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 UNQ6126/PRO20091Q6UXV3 157 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 RANBP10Q6VN20 620 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 TFAP2EQ6VUC0 442 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 RUFY4Q6ZNE9 571 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 Q6ZTK2 550 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 NOP9Q86U38 636 aaKnown RBP-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 FJX1Q86VR8 437 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 IQCHQ86VS3 1027 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 ZNF227Q86WZ6 799 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 FAM178BQ8IXR5 827 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 ENTHD1Q8IYW4 607 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 TEX45Q8NA69 505 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 KBTBD3Q8NAB2 608 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 OR10V1Q8NGI7 309 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 OR1N1Q8NGS0 311 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 DCAF4Q8WV16 495 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 ZNF480Q8WV37 535 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 KCTD13Q8WZ19 329 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 TMEM190Q8WZ59 177 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 NPIPB3Q92617 1050 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 FAM104AQ969W3 186 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 PPP1R14AQ96A00 147 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 FAM136AQ96C01 138 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 FAM122AQ96E09 287 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 TRMT61AQ96FX7 289 aaKnown RBP-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 AGAP3Q96P47 875 aa-0.54□□□□□ -2.5
RNU6-1238P-201ENST00000517215 PIGQQ9BRB3 760 aa-0.54□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms