RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 PRAMEF12O95522 483 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 ZBED1O96006 694 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 OAS1P00973 400 aaKnown RBP8.73□□□□□ -1.01
CCL28-204ENST00000514421 CFHP08603 1231 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 RALAP11233 206 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 TCF3P15923 654 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 PRLRP16471 622 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 FERP16591 822 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 GNA15P30679 374 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 GPD2P43304 727 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 TUBP50607 506 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 TKTL1P51854 596 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 FCHO2Q0JRZ9 810 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 KIF5AQ12840 1032 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 RAPGEF1Q13905 1077 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 GRM2Q14416 872 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 ASIC2Q16515 512 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 ZNF569Q5MCW4 686 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 CCDC122Q5T0U0 273 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 PMF1Q6P1K2 205 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 CC2D1AQ6P1N0 951 aaPredicted RBP8.73□□□□□ -1.01
CCL28-204ENST00000514421 RSRC2Q7L4I2 434 aaKnown RBP8.73□□□□□ -1.01
CCL28-204ENST00000514421 MTERF4Q7Z6M4 381 aaKnown RBP8.73□□□□□ -1.01
CCL28-204ENST00000514421 TADA2BQ86TJ2 420 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 SLC35F6Q8N357 371 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 KIAA1958Q8N8K9 716 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 SLC30A5Q8TAD4 765 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 STK32AQ8WU08 396 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 SECISBP2LQ93073 1101 aaKnown RBP8.73□□□□□ -1.01
CCL28-204ENST00000514421 ASIC4Q96FT7 647 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 SHDQ96IW2 340 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 NAPGQ99747 312 aaPredicted RBP8.73□□□□□ -1.01
CCL28-204ENST00000514421 LRFN3Q9BTN0 628 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 NMUR1Q9HB89 426 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 ACP6Q9NPH0 428 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 NLRC4Q9NPP4 1024 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 LUC7LQ9NQ29 371 aaKnown RBP8.73□□□□□ -1.01
CCL28-204ENST00000514421 TRPV5Q9NQA5 729 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 GKN1Q9NS71 199 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 CLIC5Q9NZA1 410 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 NAGPAQ9UK23 515 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 AJAP1Q9UKB5 411 aaPredicted RBP8.73□□□□□ -1.01
CCL28-204ENST00000514421 INTUQ9ULD6 942 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 CCL26Q9Y258 94 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 TSC2P49815 1807 aa8.73□□□□□ -1.01
CCL28-204ENST00000514421 A0A087X0T9 212 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 A0A1W2PQH9 124 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 PRR33A8MZF0 331 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 M0QYV0 167 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 STK25O00506 426 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 AKR1B10O60218 316 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 TLR5O60602 858 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 URI1O94763 535 aaPredicted RBP8.72□□□□□ -1.01
CCL28-204ENST00000514421 OLFM2O95897 454 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 FAM228BP0C875 321 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 MBL2P11226 248 aaPredicted RBP8.72□□□□□ -1.01
CCL28-204ENST00000514421 RARGP13631 454 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 LCP1P13796 627 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 GLULP15104 373 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 SOX5P35711 763 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 ATP5C1P36542 298 aaKnown RBP8.72□□□□□ -1.01
CCL28-204ENST00000514421 STAT1P42224 750 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 ACADSBP45954 432 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 RPL34P49207 117 aaKnown RBP8.72□□□□□ -1.01
CCL28-204ENST00000514421 PGFP49763 221 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 RGS7P49802 495 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 MLLT6P55198 1093 aaPredicted RBP8.72□□□□□ -1.01
CCL28-204ENST00000514421 PRKCQQ04759 706 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 KLHL30Q0D2K2 578 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 WHAMMP3Q1A5X7 153 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 DENND1BQ6P3S1 775 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 KLHDC10Q6PID8 442 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 ZNF572Q7Z3I7 529 aaPredicted RBP8.72□□□□□ -1.01
CCL28-204ENST00000514421 SCD5Q86SK9 330 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 KIAA1328Q86T90 577 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 SIX5Q8N196 739 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 SIX6OS1Q8N1H7 587 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 SCML4Q8N228 414 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 TRIM58Q8NG06 486 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 CSGALNACT1Q8TDX6 532 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 SH3RF2Q8TEC5 729 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 DNASE1L2Q92874 299 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 SPAG5Q96R06 1193 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 CDK5RAP1Q96SZ6 601 aaKnown RBP8.72□□□□□ -1.01
CCL28-204ENST00000514421 NELL2Q99435 816 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 FAM83CQ9BQN1 747 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 ULBP1Q9BZM6 244 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 NACA2Q9H009 215 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 LHX5Q9H2C1 402 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 MFSD1Q9H3U5 465 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 CCSER2Q9H7U1 834 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 C11orf16Q9NQ32 467 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 CYLDQ9NQC7 956 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 CNGB3Q9NQW8 809 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.72□□□□□ -1.01
CCL28-204ENST00000514421 TRIM10Q9UDY6 481 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 GUCA1BQ9UMX6 200 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 PCDHGC3Q9UN70 934 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 JRKLQ9Y4A0 524 aa8.72□□□□□ -1.01
CCL28-204ENST00000514421 MUC3AQ02505 3323 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms