RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 HSD17B14Q9BPX1 270 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 BBS2Q9BXC9 721 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 MRPL4Q9BYD3 311 aaKnown RBP3.47□□□□□ -1.85
CHD1-211ENST00000514344 BTBD1Q9H0C5 482 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 CAAP1Q9H8G2 361 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 PTPRHQ9HD43 1115 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 GDF3Q9NR23 364 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 TRPM5Q9NZQ8 1165 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 STK17AQ9UEE5 414 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 RCAN3Q9UKA8 241 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 ITGB1BP2Q9UKP3 347 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 UBQLN1Q9UMX0 589 aaKnown RBP3.47□□□□□ -1.85
CHD1-211ENST00000514344 PCDHGA4Q9Y5G9 962 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 AKAP9Q99996 3911 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 TCHHQ07283 1943 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 WNT9AO14904 365 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 VILLO15195 856 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 CASC3O15234 703 aaKnown RBP3.47□□□□□ -1.85
CHD1-211ENST00000514344 HCRTO43612 131 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 NOL4O94818 638 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 EPHX1P07099 455 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 COPAP53621 1224 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 PEX3P56589 373 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 RACK1P63244 317 aaKnown RBP3.47□□□□□ -1.85
CHD1-211ENST00000514344 TSPY1Q01534 308 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 GRIN1Q05586 938 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 ORC1Q13415 861 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 PPP2R5AQ15172 486 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 ISXQ2M1V0 245 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 SFMBT2Q5VUG0 894 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 C1QL3Q5VWW1 255 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 MPZL3Q6UWV2 235 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 XKR5Q6UX68 686 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 METTL3Q86U44 580 aaKnown RBP3.47□□□□□ -1.85
CHD1-211ENST00000514344 JAMLQ86YT9 394 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 DCP1BQ8IZD4 617 aaKnown RBP3.47□□□□□ -1.85
CHD1-211ENST00000514344 RUFY2Q8WXA3 655 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 JPH3Q8WXH2 748 aaPredicted RBP3.47□□□□□ -1.85
CHD1-211ENST00000514344 SORCS1Q8WY21 1168 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 C22orf23Q9BZE7 217 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 TBC1D14Q9P2M4 693 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 SEL1LQ9UBV2 794 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 ANAPC2Q9UJX6 822 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 PCDHA4Q9UN74 947 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 PCDHA12Q9UN75 941 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 SH3BP1Q9Y3L3 701 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 MYH10P35580 1976 aa3.47□□□□□ -1.85
CHD1-211ENST00000514344 CDRT15L2A8MXV6 281 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 SLC27A2O14975 620 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 HOXC11O43248 304 aaPredicted RBP3.46□□□□□ -1.86
CHD1-211ENST00000514344 PRPF3O43395 683 aaKnown RBP3.46□□□□□ -1.86
CHD1-211ENST00000514344 TSPAN3O60637 253 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 DTNBO60941 627 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 CLDN1O95832 211 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 MCF2P10911 925 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 PRF1P14222 555 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 TCF3P15923 654 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 WT1P19544 449 aaPredicted RBP3.46□□□□□ -1.86
CHD1-211ENST00000514344 TGM2P21980 687 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 GNLYP22749 145 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 CD38P28907 300 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 DGKGP49619 791 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 PDE6CP51160 858 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 OXCT1P55809 520 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 PPP2R3AQ06190 1150 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 NOLC1Q14978 699 aaKnown RBP eCLIP3.46□□□□□ -1.86
CHD1-211ENST00000514344 NFE2Q16621 373 aaPredicted RBP3.46□□□□□ -1.86
CHD1-211ENST00000514344 PROX2Q3B8N5 592 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 MOXD1Q6UVY6 613 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 DHX32Q7L7V1 743 aaKnown RBP3.46□□□□□ -1.86
CHD1-211ENST00000514344 MAMDC2Q7Z304 686 aaPredicted RBP3.46□□□□□ -1.86
CHD1-211ENST00000514344 NEK8Q86SG6 692 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 BLIDQ8IZY5 108 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 MMP21Q8N119 569 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 CACTIN-AS1Q8N1I8 211 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 HPS3Q969F9 1004 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 WBP2Q969T9 261 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 SKA1Q96BD8 255 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 PRR11Q96HE9 360 aaPredicted RBP3.46□□□□□ -1.86
CHD1-211ENST00000514344 ORAI3Q9BRQ5 295 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 EBF2Q9HAK2 575 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 LRWD1Q9UFC0 647 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 RP1P56715 2156 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 PHLPP2Q6ZVD8 1323 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 A0A087X0B3 334 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 CCDC196A0A1B0GTZ2 297 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 TTC26A0AVF1 554 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 ARHGEF35A5YM69 484 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 ZNF840PA6NDX5 716 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 WIPF3A6NGB9 483 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 LACTBL1A8MY62 500 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 ABLIM1O14639 778 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 CLDN3O15551 220 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 NOBOXO60393 691 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 VPS4BO75351 444 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 LYPLA2O95372 231 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 CYP11A1P05108 521 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 IGHV4-34P06331 123 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 PRKCHP24723 683 aa3.46□□□□□ -1.86
CHD1-211ENST00000514344 TXKP42681 527 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms