RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 SH3PXD2AQ5TCZ1 1133 aa11.85□□□□□ -0.51
HTT-213ENST00000513806 OTUD1Q5VV17 481 aaPredicted RBP11.85□□□□□ -0.51
HTT-213ENST00000513806 DNAJC24Q6P3W2 148 aa11.85□□□□□ -0.51
HTT-213ENST00000513806 RSRC2Q7L4I2 434 aaKnown RBP11.85□□□□□ -0.51
HTT-213ENST00000513806 OTOP3Q7RTS5 596 aa11.85□□□□□ -0.51
HTT-213ENST00000513806 TAC4Q86UU9 113 aa11.85□□□□□ -0.51
HTT-213ENST00000513806 VPS36Q86VN1 386 aa11.85□□□□□ -0.51
HTT-213ENST00000513806 SCML4Q8N228 414 aa11.85□□□□□ -0.51
HTT-213ENST00000513806 ADAMTS19Q8TE59 1207 aa11.85□□□□□ -0.51
HTT-213ENST00000513806 ATXN2LQ8WWM7 1075 aaKnown RBP11.85□□□□□ -0.51
HTT-213ENST00000513806 IRGQQ8WZA9 623 aa11.85□□□□□ -0.51
HTT-213ENST00000513806 ZFYVE19Q96K21 471 aa11.85□□□□□ -0.51
HTT-213ENST00000513806 BTBD6Q96KE9 485 aa11.85□□□□□ -0.51
HTT-213ENST00000513806 ZFRQ96KR1 1074 aaKnown RBP11.85□□□□□ -0.51
HTT-213ENST00000513806 DESI2Q9BSY9 194 aa11.85□□□□□ -0.51
HTT-213ENST00000513806 NACA2Q9H009 215 aa11.85□□□□□ -0.51
HTT-213ENST00000513806 ABCC13Q9NSE7 274 aa11.85□□□□□ -0.51
HTT-213ENST00000513806 CNOT8Q9UFF9 292 aaKnown RBP11.85□□□□□ -0.51
HTT-213ENST00000513806 REXO2Q9Y3B8 237 aaKnown RBP11.85□□□□□ -0.51
HTT-213ENST00000513806 NUMBLQ9Y6R0 609 aa11.85□□□□□ -0.51
HTT-213ENST00000513806 SLC12A8A0AV02 714 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 HEPACAM2A8MVW5 462 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 GOLGA6L6A8MZA4 724 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 LOC730098B7Z3J9 87 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 LEFTY2O00292 366 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 CAPN9O14815 690 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 OLFM2O95897 454 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 AVPR1AP37288 418 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 YWHAZP63104 245 aaKnown RBP11.84□□□□□ -0.51
HTT-213ENST00000513806 HTR4Q13639 388 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 ZNF268Q14587 947 aaPredicted RBP11.84□□□□□ -0.51
HTT-213ENST00000513806 AAK1Q2M2I8 961 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 EFHC1Q5JVL4 640 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 DAB2IPQ5VWQ8 1189 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 VITQ6UXI7 678 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 TOGARAM2Q6ZUX3 1019 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 SLC26A9Q7LBE3 791 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 CPNE8Q86YQ8 564 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 ARHGAP18Q8N392 663 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 MSANTD4Q8NCY6 345 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 DQX1Q8TE96 717 aaKnown RBP11.84□□□□□ -0.51
HTT-213ENST00000513806 SH3RF2Q8TEC5 729 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 RNF139Q8WU17 664 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 RXFP2Q8WXD0 754 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 GOLGA1Q92805 767 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 SMARCD2Q92925 531 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 ACSF2Q96CM8 615 aaPredicted RBP11.84□□□□□ -0.51
HTT-213ENST00000513806 CFAP57Q96MR6 1250 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 MCEEQ96PE7 176 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 SLC2A13Q96QE2 648 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 TBCBQ99426 244 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 SELENOOQ9BVL4 669 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 KLF16Q9BXK1 252 aaPredicted RBP11.84□□□□□ -0.51
HTT-213ENST00000513806 POPDC2Q9HBU9 364 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 CLIC5Q9NZA1 410 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.84□□□□□ -0.51
HTT-213ENST00000513806 GDE1Q9NZC3 331 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 EPS15L1Q9UBC2 864 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 TMEM59LQ9UK28 342 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 NR2E1Q9Y466 385 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 VCANP13611 3396 aa11.84□□□□□ -0.51
HTT-213ENST00000513806 COL4A2P08572 1712 aa11.83□□□□□ -0.52
HTT-213ENST00000513806 RCCD1A6NED2 376 aa11.83□□□□□ -0.52
HTT-213ENST00000513806 NARSO43776 548 aaKnown RBP11.83□□□□□ -0.52
HTT-213ENST00000513806 HSF2BPO75031 334 aa11.83□□□□□ -0.52
HTT-213ENST00000513806 DDX6P26196 483 aaKnown RBP eCLIP11.83□□□□□ -0.52
HTT-213ENST00000513806 RFC1P35251 1148 aaPredicted RBP11.83□□□□□ -0.52
HTT-213ENST00000513806 ATP5C1P36542 298 aaKnown RBP11.83□□□□□ -0.52
HTT-213ENST00000513806 PPP3CCP48454 512 aa11.83□□□□□ -0.52
HTT-213ENST00000513806 PSEN1P49768 467 aa11.83□□□□□ -0.52
HTT-213ENST00000513806 SULT1E1P49888 294 aa11.83□□□□□ -0.52
HTT-213ENST00000513806 GSDMDP57764 484 aa11.83□□□□□ -0.52
HTT-213ENST00000513806 SLC7A9P82251 487 aa11.83□□□□□ -0.52
HTT-213ENST00000513806 CCZ1BP86790 482 aa11.83□□□□□ -0.52
HTT-213ENST00000513806 CCZ1P86791 482 aaPredicted RBP11.83□□□□□ -0.52
HTT-213ENST00000513806 ATP11AP98196 1134 aa11.83□□□□□ -0.52
HTT-213ENST00000513806 NME3Q13232 169 aa11.83□□□□□ -0.52
HTT-213ENST00000513806 MAMLD1Q13495 774 aa11.83□□□□□ -0.52
HTT-213ENST00000513806 CDO1Q16878 200 aa11.83□□□□□ -0.52
HTT-213ENST00000513806 PPP1R15BQ5SWA1 713 aa11.83□□□□□ -0.52
HTT-213ENST00000513806 TRIM68Q6AZZ1 485 aa11.83□□□□□ -0.52
HTT-213ENST00000513806 TMTC1Q8IUR5 882 aa11.83□□□□□ -0.52
HTT-213ENST00000513806 LRRC8AQ8IWT6 810 aa11.83□□□□□ -0.52
HTT-213ENST00000513806 ADHFE1Q8IWW8 467 aa11.83□□□□□ -0.52
HTT-213ENST00000513806 C3orf20Q8ND61 904 aa11.83□□□□□ -0.52
HTT-213ENST00000513806 TTC8Q8TAM2 541 aa11.83□□□□□ -0.52
HTT-213ENST00000513806 ASIC4Q96FT7 647 aa11.83□□□□□ -0.52
HTT-213ENST00000513806 PDLIM2Q96JY6 352 aa11.83□□□□□ -0.52
HTT-213ENST00000513806 KCNF1Q9H3M0 494 aa11.83□□□□□ -0.52
HTT-213ENST00000513806 TMPRSS4Q9NRS4 437 aa11.83□□□□□ -0.52
HTT-213ENST00000513806 TDP1Q9NUW8 608 aa11.83□□□□□ -0.52
HTT-213ENST00000513806 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.83□□□□□ -0.52
HTT-213ENST00000513806 MARCH2Q9P0N8 246 aa11.83□□□□□ -0.52
HTT-213ENST00000513806 CFAP97Q9P2B7 532 aa11.83□□□□□ -0.52
HTT-213ENST00000513806 DNMT3LQ9UJW3 386 aa11.83□□□□□ -0.52
HTT-213ENST00000513806 STRIP2Q9ULQ0 834 aa11.83□□□□□ -0.52
HTT-213ENST00000513806 FAM50BQ9Y247 325 aa11.83□□□□□ -0.52
HTT-213ENST00000513806 USTQ9Y2C2 406 aa11.83□□□□□ -0.52
HTT-213ENST00000513806 EPN1Q9Y6I3 576 aaPredicted RBP11.83□□□□□ -0.52
HTT-213ENST00000513806 C2CD4BA6NLJ0 364 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms