RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 PTRH1Q86Y79 214 aaKnown RBP10.17□□□□□ -0.78
PTPN20-228ENST00000513266 CCDC97Q96F63 343 aaPredicted RBP10.17□□□□□ -0.78
PTPN20-228ENST00000513266 SPATA17Q96L03 361 aa10.17□□□□□ -0.78
PTPN20-228ENST00000513266 SLC6A18Q96N87 628 aa10.17□□□□□ -0.78
PTPN20-228ENST00000513266 SLC46A1Q96NT5 459 aa10.17□□□□□ -0.78
PTPN20-228ENST00000513266 DEPDC7Q96QD5 511 aa10.17□□□□□ -0.78
PTPN20-228ENST00000513266 DUSP9Q99956 384 aaKnown RBP10.17□□□□□ -0.78
PTPN20-228ENST00000513266 ACBD6Q9BR61 282 aa10.17□□□□□ -0.78
PTPN20-228ENST00000513266 ESYT1Q9BSJ8 1104 aa10.17□□□□□ -0.78
PTPN20-228ENST00000513266 SLC25A18Q9H1K4 315 aa10.17□□□□□ -0.78
PTPN20-228ENST00000513266 BHMT2Q9H2M3 363 aa10.17□□□□□ -0.78
PTPN20-228ENST00000513266 ANO2Q9NQ90 1003 aa10.17□□□□□ -0.78
PTPN20-228ENST00000513266 GJB4Q9NTQ9 266 aa10.17□□□□□ -0.78
PTPN20-228ENST00000513266 SATB2Q9UPW6 733 aa10.17□□□□□ -0.78
PTPN20-228ENST00000513266 RBM19Q9Y4C8 960 aaKnown RBP10.17□□□□□ -0.78
PTPN20-228ENST00000513266 MED13LQ71F56 2210 aa10.17□□□□□ -0.78
PTPN20-228ENST00000513266 CDRT15L2A8MXV6 281 aa10.16□□□□□ -0.78
PTPN20-228ENST00000513266 KPNA7A9QM74 516 aa10.16□□□□□ -0.78
PTPN20-228ENST00000513266 NEDD8-MDP1E9PL57 170 aa10.16□□□□□ -0.78
PTPN20-228ENST00000513266 YKT6O15498 198 aa10.16□□□□□ -0.78
PTPN20-228ENST00000513266 OPA1O60313 960 aa10.16□□□□□ -0.78
PTPN20-228ENST00000513266 HIP1RO75146 1068 aa10.16□□□□□ -0.78
PTPN20-228ENST00000513266 SEMA4FO95754 770 aa10.16□□□□□ -0.78
PTPN20-228ENST00000513266 IGHV4-34P06331 123 aa10.16□□□□□ -0.78
PTPN20-228ENST00000513266 TYRP14679 529 aa10.16□□□□□ -0.78
PTPN20-228ENST00000513266 ACO1P21399 889 aaKnown RBP10.16□□□□□ -0.78
PTPN20-228ENST00000513266 RPA1P27694 616 aa10.16□□□□□ -0.78
PTPN20-228ENST00000513266 TNFRSF8P28908 595 aa10.16□□□□□ -0.78
PTPN20-228ENST00000513266 PDIA3P30101 505 aaKnown RBP10.16□□□□□ -0.78
PTPN20-228ENST00000513266 MATR3P43243 847 aaKnown RBP eCLIP10.16□□□□□ -0.78
PTPN20-228ENST00000513266 MAGEA11P43364 429 aa10.16□□□□□ -0.78
PTPN20-228ENST00000513266 ZNF132P52740 706 aa10.16□□□□□ -0.78
PTPN20-228ENST00000513266 INHBCP55103 352 aa10.16□□□□□ -0.78
PTPN20-228ENST00000513266 ASIC1P78348 528 aa10.16□□□□□ -0.78
PTPN20-228ENST00000513266 MAPK7Q13164 816 aa10.16□□□□□ -0.78
PTPN20-228ENST00000513266 SRSF6Q13247 344 aaKnown RBP10.16□□□□□ -0.78
PTPN20-228ENST00000513266 TMEM132DQ14C87 1099 aa10.16□□□□□ -0.78
PTPN20-228ENST00000513266 ECM1Q16610 540 aa10.16□□□□□ -0.78
PTPN20-228ENST00000513266 C3orf38Q5JPI3 329 aa10.16□□□□□ -0.78
PTPN20-228ENST00000513266 DENND5BQ6ZUT9 1274 aa10.16□□□□□ -0.78
PTPN20-228ENST00000513266 USP53Q70EK8 1073 aa10.16□□□□□ -0.78
PTPN20-228ENST00000513266 SPATA2LQ8IUW3 424 aaPredicted RBP10.16□□□□□ -0.78
PTPN20-228ENST00000513266 ADGRF2Q8IZF7 708 aa10.16□□□□□ -0.78
PTPN20-228ENST00000513266 PDCL2Q8N4E4 241 aa10.16□□□□□ -0.78
PTPN20-228ENST00000513266 FAM212AQ96EL1 285 aa10.16□□□□□ -0.78
PTPN20-228ENST00000513266 SGF29Q96ES7 293 aa10.16□□□□□ -0.78
PTPN20-228ENST00000513266 PRR11Q96HE9 360 aaPredicted RBP10.16□□□□□ -0.78
PTPN20-228ENST00000513266 FUBP3Q96I24 572 aaKnown RBP eCLIP10.16□□□□□ -0.78
PTPN20-228ENST00000513266 BBS2Q9BXC9 721 aa10.16□□□□□ -0.78
PTPN20-228ENST00000513266 AGXT2Q9BYV1 514 aa10.16□□□□□ -0.78
PTPN20-228ENST00000513266 DDX43Q9NXZ2 648 aaKnown RBP10.16□□□□□ -0.78
PTPN20-228ENST00000513266 THAP10Q9P2Z0 257 aaPredicted RBP10.16□□□□□ -0.78
PTPN20-228ENST00000513266 ATXN7L1Q9ULK2 861 aaPredicted RBP10.16□□□□□ -0.78
PTPN20-228ENST00000513266 SPENQ96T58 3664 aaKnown RBP10.16□□□□□ -0.78
PTPN20-228ENST00000513266 SCN8AQ9UQD0 1980 aa10.15□□□□□ -0.78
PTPN20-228ENST00000513266 ADGRG4Q8IZF6 3080 aa10.15□□□□□ -0.78
PTPN20-228ENST00000513266 PMS2P1A4D2B8 440 aa10.15□□□□□ -0.78
PTPN20-228ENST00000513266 COCHO43405 550 aa10.15□□□□□ -0.78
PTPN20-228ENST00000513266 SYNCRIPO60506 623 aaKnown RBP10.15□□□□□ -0.78
PTPN20-228ENST00000513266 NEMFO60524 1076 aa10.15□□□□□ -0.78
PTPN20-228ENST00000513266 HMGB1P09429 215 aaKnown RBP10.15□□□□□ -0.78
PTPN20-228ENST00000513266 PRKCHP24723 683 aa10.15□□□□□ -0.78
PTPN20-228ENST00000513266 PPP3CCP48454 512 aa10.15□□□□□ -0.78
PTPN20-228ENST00000513266 DGKGP49619 791 aa10.15□□□□□ -0.78
PTPN20-228ENST00000513266 MYL7Q01449 175 aa10.15□□□□□ -0.78
PTPN20-228ENST00000513266 STRN3Q13033 797 aa10.15□□□□□ -0.78
PTPN20-228ENST00000513266 ZNF787Q6DD87 383 aa10.15□□□□□ -0.78
PTPN20-228ENST00000513266 OSTM1Q86WC4 334 aa10.15□□□□□ -0.78
PTPN20-228ENST00000513266 TICAM1Q8IUC6 712 aa10.15□□□□□ -0.78
PTPN20-228ENST00000513266 ZNF564Q8TBZ8 553 aaPredicted RBP10.15□□□□□ -0.78
PTPN20-228ENST00000513266 P2RY11Q96G91 374 aa10.15□□□□□ -0.78
PTPN20-228ENST00000513266 XPO6Q96QU8 1125 aaKnown RBP10.15□□□□□ -0.78
PTPN20-228ENST00000513266 TMEM60Q9H2L4 133 aa10.15□□□□□ -0.78
PTPN20-228ENST00000513266 L1RE1Q9UN81 338 aa10.15□□□□□ -0.78
PTPN20-228ENST00000513266 SH3BP1Q9Y3L3 701 aa10.15□□□□□ -0.78
PTPN20-228ENST00000513266 SFI1A8K8P3 1242 aa10.14□□□□□ -0.79
PTPN20-228ENST00000513266 TRIM38O00635 465 aa10.14□□□□□ -0.79
PTPN20-228ENST00000513266 WNT9AO14904 365 aa10.14□□□□□ -0.79
PTPN20-228ENST00000513266 SIGLEC6O43699 453 aa10.14□□□□□ -0.79
PTPN20-228ENST00000513266 ATP2C2O75185 946 aa10.14□□□□□ -0.79
PTPN20-228ENST00000513266 MAPTP10636 758 aaKnown RBP10.14□□□□□ -0.79
PTPN20-228ENST00000513266 RBMS1P29558 406 aaKnown RBP10.14□□□□□ -0.79
PTPN20-228ENST00000513266 CASRP41180 1078 aa10.14□□□□□ -0.79
PTPN20-228ENST00000513266 RXRGP48443 463 aa10.14□□□□□ -0.79
PTPN20-228ENST00000513266 ARRB1P49407 418 aaPredicted RBP10.14□□□□□ -0.79
PTPN20-228ENST00000513266 BCAT1P54687 386 aa10.14□□□□□ -0.79
PTPN20-228ENST00000513266 EVCP57679 992 aa10.14□□□□□ -0.79
PTPN20-228ENST00000513266 TAF10Q12962 218 aa10.14□□□□□ -0.79
PTPN20-228ENST00000513266 NR5A1Q13285 461 aa10.14□□□□□ -0.79
PTPN20-228ENST00000513266 CLCA4Q14CN2 919 aa10.14□□□□□ -0.79
PTPN20-228ENST00000513266 TBR1Q16650 682 aa10.14□□□□□ -0.79
PTPN20-228ENST00000513266 FBXL16Q8N461 479 aa10.14□□□□□ -0.79
PTPN20-228ENST00000513266 TMEM161BQ8NDZ6 487 aa10.14□□□□□ -0.79
PTPN20-228ENST00000513266 TNFRSF25Q93038 417 aa10.14□□□□□ -0.79
PTPN20-228ENST00000513266 NTPCRQ9BSD7 190 aaKnown RBP10.14□□□□□ -0.79
PTPN20-228ENST00000513266 LHX5Q9H2C1 402 aa10.14□□□□□ -0.79
PTPN20-228ENST00000513266 EBF2Q9HAK2 575 aa10.14□□□□□ -0.79
PTPN20-228ENST00000513266 GDF3Q9NR23 364 aa10.14□□□□□ -0.79
PTPN20-228ENST00000513266 GEMIN8Q9NWZ8 242 aaKnown RBP10.14□□□□□ -0.79
PTPN20-228ENST00000513266 DPP3Q9NY33 737 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms