RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 ITPKAP23677 461 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 NR2F2P24468 414 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 CCNE1P24864 410 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 AVPR1AP37288 418 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 KPNA1P52294 538 aaPredicted RBP9.15□□□□□ -0.94
PDPN-209ENST00000510906 AP3M2P53677 418 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 CACNA2D1P54289 1103 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 CDH8P55286 799 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 NUCB2P80303 420 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 TNK2Q07912 1038 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 PNOCQ13519 176 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 GAS6Q14393 721 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 KCNB1Q14721 858 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 MAPRE1Q15691 268 aaKnown RBP9.15□□□□□ -0.94
PDPN-209ENST00000510906 PCSK7Q16549 785 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 ZACNQ401N2 412 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 ARHGAP29Q52LW3 1261 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 VSTM1Q6UX27 236 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 Q6ZNB5 142 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 MON1AQ86VX9 555 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 SMYD4Q8IYR2 804 aaPredicted RBP9.15□□□□□ -0.94
PDPN-209ENST00000510906 GUF1Q8N442 669 aaKnown RBP9.15□□□□□ -0.94
PDPN-209ENST00000510906 CELF5Q8N6W0 485 aaKnown RBP9.15□□□□□ -0.94
PDPN-209ENST00000510906 TMEM102Q8N9M5 508 aaPredicted RBP9.15□□□□□ -0.94
PDPN-209ENST00000510906 MYCBPAPQ8TBZ2 947 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 CSGALNACT1Q8TDX6 532 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 SREK1Q8WXA9 508 aaKnown RBP9.15□□□□□ -0.94
PDPN-209ENST00000510906 NKD2Q969F2 451 aaPredicted RBP9.15□□□□□ -0.94
PDPN-209ENST00000510906 TRMT2BQ96GJ1 504 aaKnown RBP9.15□□□□□ -0.94
PDPN-209ENST00000510906 MYRFLQ96LU7 910 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 SLC22A12Q96S37 553 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 ZNF518BQ9C0D4 1074 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 SDCBP2Q9H190 292 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 TRPC7Q9HCX4 862 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 SRA1Q9HD15 236 aaKnown RBP9.15□□□□□ -0.94
PDPN-209ENST00000510906 TMEM30AQ9NV96 361 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 GTSE1Q9NYZ3 720 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 UXTQ9UBK9 157 aaPredicted RBP9.15□□□□□ -0.94
PDPN-209ENST00000510906 FRMD4BQ9Y2L6 1034 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 ACACBO00763 2458 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 TCHHQ07283 1943 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 GOLGA6L4A6NEF3 574 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 F8VP50 259 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 SPECC1L-ADORA2AF8WAN1 911 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 CLDN5O00501 218 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 NCAM2O15394 837 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 LAMTOR5O43504 91 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 TRIM49P0CI25 452 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 TRIM49CP0CI26 452 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 DDX6P26196 483 aaKnown RBP eCLIP9.14□□□□□ -0.95
PDPN-209ENST00000510906 GRIK1P39086 918 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 MAGEA9P43362 315 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 RPS9P46781 194 aaKnown RBP9.14□□□□□ -0.95
PDPN-209ENST00000510906 VAMP7P51809 220 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 RACK1P63244 317 aaKnown RBP9.14□□□□□ -0.95
PDPN-209ENST00000510906 CSTF1Q05048 431 aaKnown RBP9.14□□□□□ -0.95
PDPN-209ENST00000510906 PPP3CAQ08209 521 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 MTAPQ13126 283 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 NFIL3Q16649 462 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 ZCWPW2Q504Y3 356 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 ZNF394Q53GI3 561 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 ZNF667Q5HYK9 610 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 TRIM68Q6AZZ1 485 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 SPOPLQ6IQ16 392 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 TXNDC11Q6PKC3 985 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 B3GALNT2Q8NCR0 500 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 ENGASEQ8NFI3 743 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 ERCC4Q92889 916 aaPredicted RBP9.14□□□□□ -0.95
PDPN-209ENST00000510906 EEF2KMTQ96G04 330 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 SPATA17Q96L03 361 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 C8orf48Q96LL4 319 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 CYP2S1Q96SQ9 504 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 B3GNT5Q9BYG0 378 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 CCSER2Q9H7U1 834 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 LMAN1LQ9HAT1 526 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 GKN1Q9NS71 199 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 TDP1Q9NUW8 608 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 DNAJB12Q9NXW2 375 aaKnown RBP9.14□□□□□ -0.95
PDPN-209ENST00000510906 ZMYM5Q9UJ78 669 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.14□□□□□ -0.95
PDPN-209ENST00000510906 COL4A2P08572 1712 aa9.14□□□□□ -0.95
PDPN-209ENST00000510906 PTPRZ1P23471 2315 aaPredicted RBP9.13□□□□□ -0.95
PDPN-209ENST00000510906 C2orf78A6NCI8 922 aa9.13□□□□□ -0.95
PDPN-209ENST00000510906 IKBKBO14920 756 aa9.13□□□□□ -0.95
PDPN-209ENST00000510906 MAPK13O15264 365 aa9.13□□□□□ -0.95
PDPN-209ENST00000510906 ASS1P00966 412 aaKnown RBP9.13□□□□□ -0.95
PDPN-209ENST00000510906 HLA-DRAP01903 254 aa9.13□□□□□ -0.95
PDPN-209ENST00000510906 CKMP06732 381 aa9.13□□□□□ -0.95
PDPN-209ENST00000510906 CHRNB1P11230 501 aa9.13□□□□□ -0.95
PDPN-209ENST00000510906 BMP4P12644 408 aa9.13□□□□□ -0.95
PDPN-209ENST00000510906 ARSAP15289 507 aa9.13□□□□□ -0.95
PDPN-209ENST00000510906 ANXA13P27216 316 aa9.13□□□□□ -0.95
PDPN-209ENST00000510906 PIK3CAP42336 1068 aa9.13□□□□□ -0.95
PDPN-209ENST00000510906 GRIA4P48058 902 aa9.13□□□□□ -0.95
PDPN-209ENST00000510906 GCLMP48507 274 aa9.13□□□□□ -0.95
PDPN-209ENST00000510906 MLLT6P55198 1093 aaPredicted RBP9.13□□□□□ -0.95
PDPN-209ENST00000510906 TSSK4Q6SA08 328 aa9.13□□□□□ -0.95
PDPN-209ENST00000510906 DENND5BQ6ZUT9 1274 aa9.13□□□□□ -0.95
PDPN-209ENST00000510906 FAM35AQ86V20 835 aa9.13□□□□□ -0.95
PDPN-209ENST00000510906 RALGPS2Q86X27 583 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms