RNA–Protein interactions for RNA: ENST00000509818.5

SEC24D-209, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-209ENST00000509818 CHKAP35790 457 aa9.43□□□□□ -0.9
SEC24D-209ENST00000509818 BRCC3P46736 316 aa9.43□□□□□ -0.9
SEC24D-209ENST00000509818 SULT1E1P49888 294 aa9.43□□□□□ -0.9
SEC24D-209ENST00000509818 MNX1P50219 401 aaPredicted RBP9.43□□□□□ -0.9
SEC24D-209ENST00000509818 CDK7P50613 346 aa9.43□□□□□ -0.9
SEC24D-209ENST00000509818 BFSP2Q13515 415 aa9.43□□□□□ -0.9
SEC24D-209ENST00000509818 NOMO1Q15155 1222 aa9.43□□□□□ -0.9
SEC24D-209ENST00000509818 DPYSL2Q16555 572 aa9.43□□□□□ -0.9
SEC24D-209ENST00000509818 ZC3H12AQ5D1E8 599 aaKnown RBP9.43□□□□□ -0.9
SEC24D-209ENST00000509818 NOMO2Q5JPE7 1267 aa9.43□□□□□ -0.9
SEC24D-209ENST00000509818 INTS6LQ5JSJ4 861 aaKnown RBP9.43□□□□□ -0.9
SEC24D-209ENST00000509818 C6orf118Q5T5N4 469 aa9.43□□□□□ -0.9
SEC24D-209ENST00000509818 DARS2Q6PI48 645 aaKnown RBP9.43□□□□□ -0.9
SEC24D-209ENST00000509818 KDM7AQ6ZMT4 941 aa9.43□□□□□ -0.9
SEC24D-209ENST00000509818 LRRC8DQ7L1W4 858 aa9.43□□□□□ -0.9
SEC24D-209ENST00000509818 PRUNE1Q86TP1 453 aa9.43□□□□□ -0.9
SEC24D-209ENST00000509818 FAF2Q96CS3 445 aa9.43□□□□□ -0.9
SEC24D-209ENST00000509818 SLC2A13Q96QE2 648 aa9.43□□□□□ -0.9
SEC24D-209ENST00000509818 RTP3Q9BQQ7 232 aa9.43□□□□□ -0.9
SEC24D-209ENST00000509818 CRISPLD2Q9H0B8 497 aa9.43□□□□□ -0.9
SEC24D-209ENST00000509818 CDC42EP4Q9H3Q1 356 aaKnown RBP9.43□□□□□ -0.9
SEC24D-209ENST00000509818 DHX35Q9H5Z1 703 aaKnown RBP9.43□□□□□ -0.9
SEC24D-209ENST00000509818 POPDC2Q9HBU9 364 aa9.43□□□□□ -0.9
SEC24D-209ENST00000509818 GPATCH2LQ9NWQ4 482 aa9.43□□□□□ -0.9
SEC24D-209ENST00000509818 BCCIPQ9P287 314 aaKnown RBP eCLIP9.43□□□□□ -0.9
SEC24D-209ENST00000509818 PCDHB8Q9UN66 801 aa9.43□□□□□ -0.9
SEC24D-209ENST00000509818 CEP290O15078 2479 aa9.43□□□□□ -0.9
SEC24D-209ENST00000509818 CFAP69A5D8W1 941 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 H7C0C1 242 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 SHBGP04278 402 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 PECAM1P16284 738 aaPredicted RBP9.42□□□□□ -0.9
SEC24D-209ENST00000509818 TFE3P19532 575 aaPredicted RBP9.42□□□□□ -0.9
SEC24D-209ENST00000509818 NR1D1P20393 614 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 ATP5OP48047 213 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 NDUFV1P49821 464 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 BCAR1P56945 870 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 ROR1Q01973 937 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 MBTPS1Q14703 1052 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 CA9Q16790 459 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 CCDC142Q17RM4 750 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 DCAF6Q58WW2 860 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 RAB41Q5JT25 222 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 RNASEH2BQ5TBB1 312 aaKnown RBP9.42□□□□□ -0.9
SEC24D-209ENST00000509818 SLC9A4Q6AI14 798 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 OVOS1Q6IE37 1185 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 C1orf228Q6PIY5 440 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 SH2D3CQ8N5H7 860 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 PQLC3Q8N755 202 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 PLD5Q8N7P1 536 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 GLIS1Q8NBF1 620 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 PCDH19Q8TAB3 1148 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 NT5C3BQ969T7 300 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 PGM2Q96G03 612 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 NPY6RQ99463 290 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 ULBP1Q9BZM6 244 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 STMN4Q9H169 189 aaPredicted RBP9.42□□□□□ -0.9
SEC24D-209ENST00000509818 CSNK1G1Q9HCP0 422 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 RRN3Q9NYV6 651 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 RCOR3Q9P2K3 495 aaPredicted RBP9.42□□□□□ -0.9
SEC24D-209ENST00000509818 AP4E1Q9UPM8 1137 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 SHOC2Q9UQ13 582 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 TMEM189-UBE2V1I3L0A0 370 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 I3L4J1 428 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 DNM1LO00429 736 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 CAPN9O14815 690 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 RASGRF2O14827 1237 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 CYP2F1P24903 491 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 RPL22P35268 128 aaKnown RBP9.42□□□□□ -0.9
SEC24D-209ENST00000509818 NR2C2P49116 596 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 DAOAP59103 153 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 TSPY1Q01534 308 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 DSC1Q08554 894 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 PAN2Q504Q3 1202 aaKnown RBP9.42□□□□□ -0.9
SEC24D-209ENST00000509818 PPP6R3Q5H9R7 873 aaPredicted RBP9.42□□□□□ -0.9
SEC24D-209ENST00000509818 NPNTQ6UXI9 565 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 UNC45BQ8IWX7 931 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 PPIL6Q8IXY8 311 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 SCML4Q8N228 414 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 ZMIZ2Q8NF64 920 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 IRGQQ8WZA9 623 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 NDRG1Q92597 394 aaKnown RBP9.42□□□□□ -0.9
SEC24D-209ENST00000509818 MYLPFQ96A32 169 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 TTC25Q96NG3 672 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 FAM193BQ96PV7 902 aaPredicted RBP9.42□□□□□ -0.9
SEC24D-209ENST00000509818 RBM15Q96T37 977 aaKnown RBP eCLIP9.42□□□□□ -0.9
SEC24D-209ENST00000509818 KCNK16Q96T55 309 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 CCDC77Q9BR77 488 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 CAPS2Q9BXY5 557 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 ELAC1Q9H777 363 aaKnown RBP9.42□□□□□ -0.9
SEC24D-209ENST00000509818 NRDE2Q9H7Z3 1164 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 TMEM161AQ9NX61 479 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 FZD10Q9ULW2 581 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 NOVA2Q9UNW9 492 aaKnown RBP9.42□□□□□ -0.9
SEC24D-209ENST00000509818 FRMPD3Q5JV73 1810 aa9.42□□□□□ -0.9
SEC24D-209ENST00000509818 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.41□□□□□ -0.9
SEC24D-209ENST00000509818 TLDC2A0PJX2 215 aa9.41□□□□□ -0.9
SEC24D-209ENST00000509818 BCLAF3A2AJT9 711 aaKnown RBP9.41□□□□□ -0.9
SEC24D-209ENST00000509818 HHLA1C9JL84 531 aa9.41□□□□□ -0.9
SEC24D-209ENST00000509818 M0QYT0 321 aa9.41□□□□□ -0.9
SEC24D-209ENST00000509818 RGS16O15492 202 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms