RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 CCDC70Q6NSX1 233 aa5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 TAPT1Q6NXT6 567 aa5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 CCDC146Q8IYE0 955 aa5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 CBARPQ8N350 705 aaPredicted RBP5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 MAB21L3Q8N8X9 362 aa5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 DRAXINQ8NBI3 349 aaPredicted RBP5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 C3orf20Q8ND61 904 aa5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 HASPINQ8TF76 798 aa5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 SCARB1Q8WTV0 552 aa5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 FAXDC2Q96IV6 333 aa5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 CLPTM1LQ96KA5 538 aa5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 MRGPRX4Q96LA9 322 aa5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 RMDN2Q96LZ7 410 aa5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 ZNF778Q96MU6 729 aa5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 HAPLN3Q96S86 360 aa5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 BAG1Q99933 345 aaPredicted RBP5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 BPIFA3Q9BQP9 254 aa5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 CLSTN2Q9H4D0 955 aa5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 SLC5A4Q9NY91 659 aa5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 ITGB1BP2Q9UKP3 347 aa5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 LIMCH1Q9UPQ0 1083 aa5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 SMC3Q9UQE7 1217 aa5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 IPPQ9Y573 584 aa5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 WNT6Q9Y6F9 365 aa5.01□□□□□ -1.61
PDLIM5-211ENST00000508531 AOX1Q06278 1338 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 SOS1Q07889 1333 aaPredicted RBP5□□□□□ -1.61
PDLIM5-211ENST00000508531 KAT6BQ8WYB5 2073 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 YTHDC2Q9H6S0 1430 aaKnown RBP5□□□□□ -1.61
PDLIM5-211ENST00000508531 KIF1AQ12756 1690 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 GOLGA6L10A0A0M3HER8 536 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 E9PLN8 166 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 PDLIM1O00151 329 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 AHCYL1O43865 530 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 SHOX2O60902 331 aaPredicted RBP5□□□□□ -1.61
PDLIM5-211ENST00000508531 EDNRBP24530 442 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 ITPKBP27987 946 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 GCKP35557 465 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 NPTX2P47972 431 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 AARSP49588 968 aaKnown RBP eCLIP5□□□□□ -1.61
PDLIM5-211ENST00000508531 CLNS1AP54105 237 aaKnown RBP5□□□□□ -1.61
PDLIM5-211ENST00000508531 CCZ1BP86790 482 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 CCZ1P86791 482 aaPredicted RBP5□□□□□ -1.61
PDLIM5-211ENST00000508531 PKP1Q13835 747 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 PDIA5Q14554 519 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 HLXQ14774 488 aaPredicted RBP5□□□□□ -1.61
PDLIM5-211ENST00000508531 SNCBQ16143 134 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 SLC5A9Q2M3M2 681 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 CCDC57Q2TAC2 916 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 INAVAQ3KP66 663 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 ANO6Q4KMQ2 910 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 FCRLBQ6BAA4 426 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 SLC30A10Q6XR72 485 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 TOM1L2Q6ZVM7 507 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 RSRC2Q7L4I2 434 aaKnown RBP5□□□□□ -1.61
PDLIM5-211ENST00000508531 ARMC9Q7Z3E5 817 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 TMPRSS9Q7Z410 1059 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 RASAL3Q86YV0 1011 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 MFN1Q8IWA4 741 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 GBP7Q8N8V2 638 aaPredicted RBP5□□□□□ -1.61
PDLIM5-211ENST00000508531 LZICQ8WZA0 190 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 CCDC47Q96A33 483 aaKnown RBP5□□□□□ -1.61
PDLIM5-211ENST00000508531 PPP1R13BQ96KQ4 1090 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 PRAM1Q96QH2 718 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 TRIB1Q96RU8 372 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 SMOQ99835 787 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 VKORC1Q9BQB6 163 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 JPH2Q9BR39 696 aaPredicted RBP5□□□□□ -1.61
PDLIM5-211ENST00000508531 PAGR1Q9BTK6 254 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 UBA5Q9GZZ9 404 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 DCTPP1Q9H773 170 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5□□□□□ -1.61
PDLIM5-211ENST00000508531 CFAP45Q9UL16 551 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 RAB21Q9UL25 225 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 NR2E3Q9Y5X4 410 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 IQGAP3Q86VI3 1631 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 WDR90Q96KV7 1748 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 SBF2Q86WG5 1849 aa5□□□□□ -1.61
PDLIM5-211ENST00000508531 ADGRA2Q96PE1 1338 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 WDR27A2RRH5 827 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 WDR91A4D1P6 747 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 CCDC154A6NI56 674 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 EXOC5O00471 708 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 FIBPO43427 364 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 XPOTO43592 962 aaKnown RBP4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 PCDHGA12O60330 932 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 URI1O94763 535 aaPredicted RBP4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 MYBL2P10244 700 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 PEX19P40855 299 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 CD151P48509 253 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 AMPHP49418 695 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 RPS6KA3P51812 740 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 SOX10P56693 466 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 NXPH1P58417 271 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 POU6F2P78424 691 aaPredicted RBP4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 KIF23Q02241 960 aaPredicted RBP4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 ITIH3Q06033 890 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 LRMPQ12912 555 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 PPFIA1Q13136 1202 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 DYNC1I2Q13409 638 aaKnown RBP4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 ANKRD1Q15327 319 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms