RNA–Protein interactions for RNA: ENST00000507761.1

LINC01088-204, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 842 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-204ENST00000507761 ZKSCAN1P17029 563 aaPredicted RBP4.34□□□□□ -1.71
LINC01088-204ENST00000507761 TPH1P17752 444 aa4.34□□□□□ -1.71
LINC01088-204ENST00000507761 CDKN2AP42771 156 aaKnown RBP4.34□□□□□ -1.71
LINC01088-204ENST00000507761 EIF4A1P60842 406 aaKnown RBP4.34□□□□□ -1.71
LINC01088-204ENST00000507761 KPNB1Q14974 876 aaKnown RBP4.34□□□□□ -1.71
LINC01088-204ENST00000507761 CNGA2Q16280 664 aa4.34□□□□□ -1.71
LINC01088-204ENST00000507761 MANEAQ5SRI9 462 aa4.34□□□□□ -1.71
LINC01088-204ENST00000507761 UBAP2Q5T6F2 1119 aaKnown RBP4.34□□□□□ -1.71
LINC01088-204ENST00000507761 KRTAP5-11Q6L8G4 156 aa4.34□□□□□ -1.71
LINC01088-204ENST00000507761 APOA5Q6Q788 366 aa4.34□□□□□ -1.71
LINC01088-204ENST00000507761 YAF2Q8IY57 180 aa4.34□□□□□ -1.71
LINC01088-204ENST00000507761 KIAA0319LQ8IZA0 1049 aa4.34□□□□□ -1.71
LINC01088-204ENST00000507761 PELI3Q8N2H9 469 aa4.34□□□□□ -1.71
LINC01088-204ENST00000507761 GPATCH3Q96I76 525 aa4.34□□□□□ -1.71
LINC01088-204ENST00000507761 NLRP4Q96MN2 994 aa4.34□□□□□ -1.71
LINC01088-204ENST00000507761 CAMK1GQ96NX5 476 aa4.34□□□□□ -1.71
LINC01088-204ENST00000507761 HIST1H2AAQ96QV6 131 aa4.34□□□□□ -1.71
LINC01088-204ENST00000507761 CINPQ9BW66 212 aaPredicted RBP4.34□□□□□ -1.71
LINC01088-204ENST00000507761 CDH19Q9H159 772 aa4.34□□□□□ -1.71
LINC01088-204ENST00000507761 MLXIPQ9HAP2 919 aa4.34□□□□□ -1.71
LINC01088-204ENST00000507761 ARL8BQ9NVJ2 186 aa4.34□□□□□ -1.71
LINC01088-204ENST00000507761 TMEM45AQ9NWC5 275 aa4.34□□□□□ -1.71
LINC01088-204ENST00000507761 DDX56Q9NY93 547 aaKnown RBP4.34□□□□□ -1.71
LINC01088-204ENST00000507761 TPCN1Q9ULQ1 816 aa4.34□□□□□ -1.71
LINC01088-204ENST00000507761 TTBK1Q5TCY1 1321 aaPredicted RBP4.34□□□□□ -1.71
LINC01088-204ENST00000507761 SPATA31A1Q5TZJ5 1347 aa4.34□□□□□ -1.71
LINC01088-204ENST00000507761 NOTCH4Q99466 2003 aa4.34□□□□□ -1.71
LINC01088-204ENST00000507761 C2CD4BA6NLJ0 364 aa4.33□□□□□ -1.72
LINC01088-204ENST00000507761 PRAMEF2O60811 474 aa4.33□□□□□ -1.72
LINC01088-204ENST00000507761 USP12O75317 370 aa4.33□□□□□ -1.72
LINC01088-204ENST00000507761 INMTO95050 263 aa4.33□□□□□ -1.72
LINC01088-204ENST00000507761 PLAUP00749 431 aa4.33□□□□□ -1.72
LINC01088-204ENST00000507761 TNFRSF1BP20333 461 aa4.33□□□□□ -1.72
LINC01088-204ENST00000507761 JAK3P52333 1124 aa4.33□□□□□ -1.72
LINC01088-204ENST00000507761 CCDC15Q0P6D6 951 aa4.33□□□□□ -1.72
LINC01088-204ENST00000507761 CLCA4Q14CN2 919 aa4.33□□□□□ -1.72
LINC01088-204ENST00000507761 CNN3Q15417 329 aaKnown RBP4.33□□□□□ -1.72
LINC01088-204ENST00000507761 C3orf38Q5JPI3 329 aa4.33□□□□□ -1.72
LINC01088-204ENST00000507761 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.33□□□□□ -1.72
LINC01088-204ENST00000507761 CLEC9AQ6UXN8 241 aa4.33□□□□□ -1.72
LINC01088-204ENST00000507761 BCAS4Q8TDM0 211 aa4.33□□□□□ -1.72
LINC01088-204ENST00000507761 TRMT61AQ96FX7 289 aaKnown RBP4.33□□□□□ -1.72
LINC01088-204ENST00000507761 SCNM1Q9BWG6 230 aa4.33□□□□□ -1.72
LINC01088-204ENST00000507761 TM2D2Q9BX73 214 aa4.33□□□□□ -1.72
LINC01088-204ENST00000507761 SEMA5BQ9P283 1151 aa4.33□□□□□ -1.72
LINC01088-204ENST00000507761 DNAJB11Q9UBS4 358 aa4.33□□□□□ -1.72
LINC01088-204ENST00000507761 DKK4Q9UBT3 224 aa4.33□□□□□ -1.72
LINC01088-204ENST00000507761 ZNF112Q9UJU3 913 aa4.33□□□□□ -1.72
LINC01088-204ENST00000507761 MID2Q9UJV3 735 aa4.33□□□□□ -1.72
LINC01088-204ENST00000507761 L1RE1Q9UN81 338 aa4.33□□□□□ -1.72
LINC01088-204ENST00000507761 SLC27A6Q9Y2P4 619 aa4.33□□□□□ -1.72
LINC01088-204ENST00000507761 GTPBP1O00178 669 aaKnown RBP4.32□□□□□ -1.72
LINC01088-204ENST00000507761 FOXN3O00409 490 aaPredicted RBP4.32□□□□□ -1.72
LINC01088-204ENST00000507761 RRHO14718 337 aa4.32□□□□□ -1.72
LINC01088-204ENST00000507761 CA12O43570 354 aa4.32□□□□□ -1.72
LINC01088-204ENST00000507761 TXNP10599 105 aaKnown RBP4.32□□□□□ -1.72
LINC01088-204ENST00000507761 RBL1P28749 1068 aa4.32□□□□□ -1.72
LINC01088-204ENST00000507761 NTSR1P30989 418 aa4.32□□□□□ -1.72
LINC01088-204ENST00000507761 IL6STP40189 918 aaPredicted RBP4.32□□□□□ -1.72
LINC01088-204ENST00000507761 RPS16P62249 146 aaKnown RBP4.32□□□□□ -1.72
LINC01088-204ENST00000507761 MZT2AQ6P582 158 aa4.32□□□□□ -1.72
LINC01088-204ENST00000507761 DLK2Q6UY11 383 aa4.32□□□□□ -1.72
LINC01088-204ENST00000507761 FAM57BQ71RH2 274 aa4.32□□□□□ -1.72
LINC01088-204ENST00000507761 SLC25A28Q96A46 364 aa4.32□□□□□ -1.72
LINC01088-204ENST00000507761 RUNDC1Q96C34 613 aa4.32□□□□□ -1.72
LINC01088-204ENST00000507761 ZDHHC12Q96GR4 267 aa4.32□□□□□ -1.72
LINC01088-204ENST00000507761 FCRL5Q96RD9 977 aa4.32□□□□□ -1.72
LINC01088-204ENST00000507761 CHST8Q9H2A9 424 aa4.32□□□□□ -1.72
LINC01088-204ENST00000507761 TMEM8AQ9HCN3 771 aa4.32□□□□□ -1.72
LINC01088-204ENST00000507761 PRPF3O43395 683 aaKnown RBP4.31□□□□□ -1.72
LINC01088-204ENST00000507761 FGF2P09038 288 aa4.31□□□□□ -1.72
LINC01088-204ENST00000507761 PDGFRBP09619 1106 aa4.31□□□□□ -1.72
LINC01088-204ENST00000507761 U2AF1L5P0DN76 240 aaPredicted RBP4.31□□□□□ -1.72
LINC01088-204ENST00000507761 TMEM225BP0DP42 221 aa4.31□□□□□ -1.72
LINC01088-204ENST00000507761 IL1R1P14778 569 aa4.31□□□□□ -1.72
LINC01088-204ENST00000507761 BTF3P20290 206 aaKnown RBP4.31□□□□□ -1.72
LINC01088-204ENST00000507761 GALNSP34059 522 aa4.31□□□□□ -1.72
LINC01088-204ENST00000507761 COPAP53621 1224 aa4.31□□□□□ -1.72
LINC01088-204ENST00000507761 EPHB1P54762 984 aa4.31□□□□□ -1.72
LINC01088-204ENST00000507761 SLC12A2P55011 1212 aa4.31□□□□□ -1.72
LINC01088-204ENST00000507761 U2AF1Q01081 240 aaKnown RBP eCLIP4.31□□□□□ -1.72
LINC01088-204ENST00000507761 PLAG1Q6DJT9 500 aa4.31□□□□□ -1.72
LINC01088-204ENST00000507761 ADHFE1Q8IWW8 467 aa4.31□□□□□ -1.72
LINC01088-204ENST00000507761 IPCEF1Q8WWN9 437 aaPredicted RBP4.31□□□□□ -1.72
LINC01088-204ENST00000507761 CTAGE1Q96RT6 745 aa4.31□□□□□ -1.72
LINC01088-204ENST00000507761 VPS45Q9NRW7 570 aa4.31□□□□□ -1.72
LINC01088-204ENST00000507761 ZIM2Q9NZV7 527 aa4.31□□□□□ -1.72
LINC01088-204ENST00000507761 COL20A1Q9P218 1284 aa4.31□□□□□ -1.72
LINC01088-204ENST00000507761 VPS51Q9UID3 782 aa4.31□□□□□ -1.72
LINC01088-204ENST00000507761 PROCRQ9UNN8 238 aa4.31□□□□□ -1.72
LINC01088-204ENST00000507761 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.3□□□□□ -1.72
LINC01088-204ENST00000507761 LACTBL1A8MY62 500 aa4.3□□□□□ -1.72
LINC01088-204ENST00000507761 PRSS44E7EML9 344 aa4.3□□□□□ -1.72
LINC01088-204ENST00000507761 SYF2O95926 243 aaKnown RBP4.3□□□□□ -1.72
LINC01088-204ENST00000507761 TMIGD3P0DMS9 266 aaPredicted RBP4.3□□□□□ -1.72
LINC01088-204ENST00000507761 ALDH7A1P49419 539 aaKnown RBP4.3□□□□□ -1.72
LINC01088-204ENST00000507761 ANAPC15P60006 121 aa4.3□□□□□ -1.72
LINC01088-204ENST00000507761 WDR5P61964 334 aaKnown RBP4.3□□□□□ -1.72
LINC01088-204ENST00000507761 FMO1Q01740 532 aa4.3□□□□□ -1.72
LINC01088-204ENST00000507761 KCNAB1Q14722 419 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms