RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 KLF16Q9BXK1 252 aaPredicted RBP13.44□□□□□ -0.26
TCOF1-210ENST00000506767 SMG9Q9H0W8 520 aaKnown RBP13.44□□□□□ -0.26
TCOF1-210ENST00000506767 ZFP14Q9HCL3 533 aa13.44□□□□□ -0.26
TCOF1-210ENST00000506767 OLA1Q9NTK5 396 aaKnown RBP13.44□□□□□ -0.26
TCOF1-210ENST00000506767 LIMD1Q9UGP4 676 aa13.44□□□□□ -0.26
TCOF1-210ENST00000506767 DNMT3LQ9UJW3 386 aa13.44□□□□□ -0.26
TCOF1-210ENST00000506767 NAALADL1Q9UQQ1 740 aa13.44□□□□□ -0.26
TCOF1-210ENST00000506767 CCL26Q9Y258 94 aa13.44□□□□□ -0.26
TCOF1-210ENST00000506767 GOLGA6L6A8MZA4 724 aa13.43□□□□□ -0.26
TCOF1-210ENST00000506767 AKR1B10O60218 316 aa13.43□□□□□ -0.26
TCOF1-210ENST00000506767 DAB1O75553 588 aa13.43□□□□□ -0.26
TCOF1-210ENST00000506767 LCA5LO95447 670 aa13.43□□□□□ -0.26
TCOF1-210ENST00000506767 CKMP06732 381 aa13.43□□□□□ -0.26
TCOF1-210ENST00000506767 MBL2P11226 248 aaPredicted RBP13.43□□□□□ -0.26
TCOF1-210ENST00000506767 NCAM1P13591 858 aa13.43□□□□□ -0.26
TCOF1-210ENST00000506767 RRM1P23921 792 aa13.43□□□□□ -0.26
TCOF1-210ENST00000506767 VIPR2P41587 438 aa13.43□□□□□ -0.26
TCOF1-210ENST00000506767 GSDMDP57764 484 aa13.43□□□□□ -0.26
TCOF1-210ENST00000506767 EIF4EBP2Q13542 120 aaPredicted RBP13.43□□□□□ -0.26
TCOF1-210ENST00000506767 C10orf120Q5SQS8 335 aa13.43□□□□□ -0.26
TCOF1-210ENST00000506767 PPP1R15BQ5SWA1 713 aa13.43□□□□□ -0.26
TCOF1-210ENST00000506767 CCDC122Q5T0U0 273 aa13.43□□□□□ -0.26
TCOF1-210ENST00000506767 FAM102AQ5T9C2 384 aaPredicted RBP13.43□□□□□ -0.26
TCOF1-210ENST00000506767 PLEKHA7Q6IQ23 1121 aa13.43□□□□□ -0.26
TCOF1-210ENST00000506767 TMTC1Q8IUR5 882 aa13.43□□□□□ -0.26
TCOF1-210ENST00000506767 CCDC170Q8IYT3 715 aa13.43□□□□□ -0.26
TCOF1-210ENST00000506767 DEFB106AQ8N104 65 aa13.43□□□□□ -0.26
TCOF1-210ENST00000506767 CELF5Q8N6W0 485 aaKnown RBP13.43□□□□□ -0.26
TCOF1-210ENST00000506767 RIN3Q8TB24 985 aa13.43□□□□□ -0.26
TCOF1-210ENST00000506767 RNF139Q8WU17 664 aa13.43□□□□□ -0.26
TCOF1-210ENST00000506767 LRRC3BQ96PB8 259 aa13.43□□□□□ -0.26
TCOF1-210ENST00000506767 RPP25Q9BUL9 199 aaKnown RBP13.43□□□□□ -0.26
TCOF1-210ENST00000506767 PLA2G2FQ9BZM2 168 aa13.43□□□□□ -0.26
TCOF1-210ENST00000506767 DEF6Q9H4E7 631 aa13.43□□□□□ -0.26
TCOF1-210ENST00000506767 KIF9Q9HAQ2 790 aa13.43□□□□□ -0.26
TCOF1-210ENST00000506767 KCNK12Q9HB15 430 aa13.43□□□□□ -0.26
TCOF1-210ENST00000506767 IGSF9Q9P2J2 1179 aa13.43□□□□□ -0.26
TCOF1-210ENST00000506767 CPQQ9Y646 472 aa13.43□□□□□ -0.26
TCOF1-210ENST00000506767 NUMBLQ9Y6R0 609 aa13.43□□□□□ -0.26
TCOF1-210ENST00000506767 KIF26AQ9ULI4 1882 aaPredicted RBP13.42□□□□□ -0.26
TCOF1-210ENST00000506767 SIGLEC16A6NMB1 481 aa13.42□□□□□ -0.26
TCOF1-210ENST00000506767 HEPACAM2A8MVW5 462 aa13.42□□□□□ -0.26
TCOF1-210ENST00000506767 GOLGA8SH3BPF8 625 aa13.42□□□□□ -0.26
TCOF1-210ENST00000506767 LEFTY2O00292 366 aa13.42□□□□□ -0.26
TCOF1-210ENST00000506767 ZNF263O14978 683 aa13.42□□□□□ -0.26
TCOF1-210ENST00000506767 MDM4O15151 490 aa13.42□□□□□ -0.26
TCOF1-210ENST00000506767 GRAP2O75791 330 aa13.42□□□□□ -0.26
TCOF1-210ENST00000506767 IGLV3-25P01717 112 aa13.42□□□□□ -0.26
TCOF1-210ENST00000506767 MYBL1P10243 752 aa13.42□□□□□ -0.26
TCOF1-210ENST00000506767 NOS2P35228 1153 aa13.42□□□□□ -0.26
TCOF1-210ENST00000506767 MATKP42679 507 aa13.42□□□□□ -0.26
TCOF1-210ENST00000506767 EFEMP1Q12805 493 aa13.42□□□□□ -0.26
TCOF1-210ENST00000506767 USP4Q13107 963 aa13.42□□□□□ -0.26
TCOF1-210ENST00000506767 ZNF77Q15935 545 aa13.42□□□□□ -0.26
TCOF1-210ENST00000506767 TRNP1Q6NT89 227 aa13.42□□□□□ -0.26
TCOF1-210ENST00000506767 VITQ6UXI7 678 aa13.42□□□□□ -0.26
TCOF1-210ENST00000506767 RSRC2Q7L4I2 434 aaKnown RBP13.42□□□□□ -0.26
TCOF1-210ENST00000506767 PHLDB2Q86SQ0 1253 aa13.42□□□□□ -0.26
TCOF1-210ENST00000506767 MFSD6LQ8IWD5 586 aa13.42□□□□□ -0.26
TCOF1-210ENST00000506767 KIAA1958Q8N8K9 716 aa13.42□□□□□ -0.26
TCOF1-210ENST00000506767 ST13P5Q8NFI4 369 aaPredicted RBP13.42□□□□□ -0.26
TCOF1-210ENST00000506767 RSAD2Q8WXG1 361 aa13.42□□□□□ -0.26
TCOF1-210ENST00000506767 NT5C3BQ969T7 300 aa13.42□□□□□ -0.26
TCOF1-210ENST00000506767 TRIM11Q96F44 468 aa13.42□□□□□ -0.26
TCOF1-210ENST00000506767 PDLIM2Q96JY6 352 aa13.42□□□□□ -0.26
TCOF1-210ENST00000506767 BAG1Q99933 345 aaPredicted RBP13.42□□□□□ -0.26
TCOF1-210ENST00000506767 DDX23Q9BUQ8 820 aaKnown RBP13.42□□□□□ -0.26
TCOF1-210ENST00000506767 SMOC2Q9H3U7 446 aa13.42□□□□□ -0.26
TCOF1-210ENST00000506767 METTL5Q9NRN9 209 aaKnown RBP13.42□□□□□ -0.26
TCOF1-210ENST00000506767 GKN1Q9NS71 199 aa13.42□□□□□ -0.26
TCOF1-210ENST00000506767 SPTLC3Q9NUV7 552 aa13.42□□□□□ -0.26
TCOF1-210ENST00000506767 MARCH2Q9P0N8 246 aa13.42□□□□□ -0.26
TCOF1-210ENST00000506767 SFMBT1Q9UHJ3 866 aa13.42□□□□□ -0.26
TCOF1-210ENST00000506767 ANKRD62A6NC57 917 aa13.41□□□□□ -0.26
TCOF1-210ENST00000506767 SOWAHDA6NJG2 315 aa13.41□□□□□ -0.26
TCOF1-210ENST00000506767 DPYSL4O14531 572 aa13.41□□□□□ -0.26
TCOF1-210ENST00000506767 CAPN9O14815 690 aa13.41□□□□□ -0.26
TCOF1-210ENST00000506767 GREM1O60565 184 aa13.41□□□□□ -0.26
TCOF1-210ENST00000506767 KRT3P12035 628 aa13.41□□□□□ -0.26
TCOF1-210ENST00000506767 FLT3P36888 993 aa13.41□□□□□ -0.26
TCOF1-210ENST00000506767 GALCP54803 685 aa13.41□□□□□ -0.26
TCOF1-210ENST00000506767 RNASE9P60153 205 aaKnown RBP13.41□□□□□ -0.26
TCOF1-210ENST00000506767 COG7P83436 770 aa13.41□□□□□ -0.26
TCOF1-210ENST00000506767 FCHO2Q0JRZ9 810 aa13.41□□□□□ -0.26
TCOF1-210ENST00000506767 NNTQ13423 1086 aa13.41□□□□□ -0.26
TCOF1-210ENST00000506767 MAMLD1Q13495 774 aa13.41□□□□□ -0.26
TCOF1-210ENST00000506767 DCAF6Q58WW2 860 aa13.41□□□□□ -0.26
TCOF1-210ENST00000506767 BNIPLQ7Z465 357 aa13.41□□□□□ -0.26
TCOF1-210ENST00000506767 DDX42Q86XP3 938 aaKnown RBP eCLIP13.41□□□□□ -0.26
TCOF1-210ENST00000506767 GJD3Q8N144 294 aa13.41□□□□□ -0.26
TCOF1-210ENST00000506767 SLC44A3Q8N4M1 653 aa13.41□□□□□ -0.26
TCOF1-210ENST00000506767 JOSD2Q8TAC2 188 aa13.41□□□□□ -0.26
TCOF1-210ENST00000506767 BPIFB1Q8TDL5 484 aa13.41□□□□□ -0.26
TCOF1-210ENST00000506767 DQX1Q8TE96 717 aaKnown RBP13.41□□□□□ -0.26
TCOF1-210ENST00000506767 SH3RF2Q8TEC5 729 aa13.41□□□□□ -0.26
TCOF1-210ENST00000506767 NPY6RQ99463 290 aa13.41□□□□□ -0.26
TCOF1-210ENST00000506767 KXD1Q9BQD3 176 aa13.41□□□□□ -0.26
TCOF1-210ENST00000506767 SELENOOQ9BVL4 669 aa13.41□□□□□ -0.26
TCOF1-210ENST00000506767 ADAM33Q9BZ11 813 aa13.41□□□□□ -0.26
TCOF1-210ENST00000506767 NACA2Q9H009 215 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms