RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 TEDDM1Q5T9Z0 273 aa17.7■□□□□ 0.42
SQSTM1-211ENST00000506690 ADGRF2Q8IZF7 708 aa17.7■□□□□ 0.42
SQSTM1-211ENST00000506690 AKT1S1Q96B36 256 aa17.7■□□□□ 0.42
SQSTM1-211ENST00000506690 UGT1A7Q9HAW7 530 aa17.7■□□□□ 0.42
SQSTM1-211ENST00000506690 UGT1A10Q9HAW8 530 aa17.7■□□□□ 0.42
SQSTM1-211ENST00000506690 UGT1A8Q9HAW9 530 aa17.7■□□□□ 0.42
SQSTM1-211ENST00000506690 ARHGAP28Q9P2N2 729 aa17.7■□□□□ 0.42
SQSTM1-211ENST00000506690 MCF2LO15068 1137 aa17.7■□□□□ 0.42
SQSTM1-211ENST00000506690 CRTAMO95727 393 aa17.7■□□□□ 0.42
SQSTM1-211ENST00000506690 MYL4P12829 197 aa17.7■□□□□ 0.42
SQSTM1-211ENST00000506690 SERPINB8P50452 374 aa17.7■□□□□ 0.42
SQSTM1-211ENST00000506690 GALK1P51570 392 aa17.7■□□□□ 0.42
SQSTM1-211ENST00000506690 CNGA3Q16281 694 aa17.7■□□□□ 0.42
SQSTM1-211ENST00000506690 SYCP2LQ5T4T6 812 aa17.7■□□□□ 0.42
SQSTM1-211ENST00000506690 WDR78Q5VTH9 848 aa17.7■□□□□ 0.42
SQSTM1-211ENST00000506690 ARID2Q68CP9 1835 aa17.7■□□□□ 0.42
SQSTM1-211ENST00000506690 MBLAC2Q68D91 279 aa17.7■□□□□ 0.42
SQSTM1-211ENST00000506690 TAS1R3Q7RTX0 852 aa17.7■□□□□ 0.42
SQSTM1-211ENST00000506690 MAVSQ7Z434 540 aa17.7■□□□□ 0.42
SQSTM1-211ENST00000506690 ZNF554Q86TJ5 538 aa17.7■□□□□ 0.42
SQSTM1-211ENST00000506690 MAP7D3Q8IWC1 876 aa17.7■□□□□ 0.42
SQSTM1-211ENST00000506690 NUP93Q8N1F7 819 aa17.7■□□□□ 0.42
SQSTM1-211ENST00000506690 TFB1MQ8WVM0 346 aaKnown RBP17.7■□□□□ 0.42
SQSTM1-211ENST00000506690 BTBD7Q9P203 1132 aa17.7■□□□□ 0.42
SQSTM1-211ENST00000506690 COL20A1Q9P218 1284 aa17.7■□□□□ 0.42
SQSTM1-211ENST00000506690 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 LYPLA1O75608 230 aaPredicted RBP17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 ATP6V1B1P15313 513 aa17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 HSD17B4P51659 736 aa17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 FRMD7Q6ZUT3 714 aa17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 ZNF410Q86VK4 478 aa17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 SP8Q8IXZ3 490 aa17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 UBR7Q8N806 425 aa17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 DDI1Q8WTU0 396 aa17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 MMP19Q99542 508 aa17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 ZC3H7BQ9UGR2 993 aaKnown RBP17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 UBIAD1Q9Y5Z9 338 aa17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 TRMUO75648 421 aaKnown RBP17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 TOM1L1O75674 476 aa17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 FBXO21O94952 628 aa17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 CSH1P0DML2 217 aa17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 CSH2P0DML3 217 aa17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 PSMA2P25787 234 aa17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 SOX10P56693 466 aa17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 KRT81Q14533 505 aa17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 FASTKD1Q53R41 847 aaKnown RBP17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 CC2D2BQ6DHV5 1058 aa17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 TICAM1Q8IUC6 712 aa17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 TMEM126BQ8IUX1 230 aa17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 WDTC1Q8N5D0 677 aa17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 EFCAB3Q8N7B9 438 aa17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 TMEM35BQ8NCS4 154 aa17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 SPATA18Q8TC71 538 aa17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 ABTB1Q969K4 478 aaPredicted RBP17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 GFM2Q969S9 779 aaKnown RBP17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 SHCBP1LQ9BZQ2 653 aa17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 ZC3H12CQ9C0D7 883 aaKnown RBP17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 TBC1D22BQ9NU19 505 aa17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 DNAJC28Q9NX36 388 aa17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 AP4B1Q9Y6B7 739 aa17.69■□□□□ 0.42
SQSTM1-211ENST00000506690 NPM3O75607 178 aaKnown RBP17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 SRGAP2CP0DJJ0 459 aa17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 SRGAP2BP0DMP2 458 aa17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 FGF3P11487 239 aaPredicted RBP17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 RFC1P35251 1148 aaPredicted RBP17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 IDH3AP50213 366 aa17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 NLRP11P59045 1033 aaKnown RBP17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 ISLR2Q6UXK2 745 aa17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 LDHDQ86WU2 507 aa17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 KIAA0319LQ8IZA0 1049 aa17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 FAF2Q96CS3 445 aa17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 FRMD8Q9BZ67 464 aaPredicted RBP17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 ZNF518BQ9C0D4 1074 aa17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 ZNF541Q9H0D2 1346 aa17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 ADCY3O60266 1144 aa17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 TOP3BO95985 862 aaKnown RBP17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 APOEP02649 317 aa17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 HNRNPCP07910 306 aaKnown RBP eCLIP17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 CDH2P19022 906 aaPredicted RBP17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 SLC1A6P48664 564 aa17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 NR1H2P55055 460 aa17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 HDAC4P56524 1084 aa17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 TMED1Q13445 227 aa17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 HADHQ16836 314 aaKnown RBP17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 DOK7Q18PE1 504 aa17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 STXBP5Q5T5C0 1151 aa17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 CYP4A22Q5TCH4 519 aa17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 PDPK2PQ6A1A2 396 aa17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 POTEAQ6S8J7 498 aa17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 RFX6Q8HWS3 928 aa17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 PPP1R14CQ8TAE6 165 aa17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 KCNK16Q96T55 309 aa17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 MRPL1Q9BYD6 325 aaKnown RBP17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 APPL1Q9UKG1 709 aa17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 PADI4Q9UM07 663 aa17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 CEPT1Q9Y6K0 416 aa17.68■□□□□ 0.42
SQSTM1-211ENST00000506690 MMP10P09238 476 aa17.67■□□□□ 0.42
SQSTM1-211ENST00000506690 ALOX15P16050 662 aaPredicted RBP17.67■□□□□ 0.42
SQSTM1-211ENST00000506690 CDH5P33151 784 aaPredicted RBP17.67■□□□□ 0.42
SQSTM1-211ENST00000506690 GABRB2P47870 512 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms