RNA–Protein interactions for RNA: ENST00000505564.2

AC012339.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC012339.1, Length 941 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012339.1-201ENST00000505564 CNGB3Q9NQW8 809 aa11.06□□□□□ -0.64
AC012339.1-201ENST00000505564 ARHGEF3Q9NR81 526 aa11.06□□□□□ -0.64
AC012339.1-201ENST00000505564 GKN1Q9NS71 199 aa11.06□□□□□ -0.64
AC012339.1-201ENST00000505564 OLA1Q9NTK5 396 aaKnown RBP11.06□□□□□ -0.64
AC012339.1-201ENST00000505564 DUS2Q9NX74 493 aaKnown RBP11.06□□□□□ -0.64
AC012339.1-201ENST00000505564 SMPD4Q9NXE4 827 aa11.06□□□□□ -0.64
AC012339.1-201ENST00000505564 CLIC5Q9NZA1 410 aa11.06□□□□□ -0.64
AC012339.1-201ENST00000505564 DNMT3LQ9UJW3 386 aa11.06□□□□□ -0.64
AC012339.1-201ENST00000505564 LSM7Q9UK45 103 aaKnown RBP11.06□□□□□ -0.64
AC012339.1-201ENST00000505564 SH3BP1Q9Y3L3 701 aa11.06□□□□□ -0.64
AC012339.1-201ENST00000505564 CPQQ9Y646 472 aa11.06□□□□□ -0.64
AC012339.1-201ENST00000505564 USP3Q9Y6I4 520 aa11.06□□□□□ -0.64
AC012339.1-201ENST00000505564 F8VZ95 297 aa11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 LEFTY2O00292 366 aa11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 NCAM2O15394 837 aa11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 COCHO43405 550 aa11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 OAS1P00973 400 aaKnown RBP11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 ZDHHC11BP0C7U3 371 aa11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 MRE11P49959 708 aa11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 UBASH3AP57075 661 aa11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 MTF1Q14872 753 aa11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 MLF2Q15773 248 aaPredicted RBP11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 ITPRIPL2Q3MIP1 535 aa11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 RAB41Q5JT25 222 aa11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 ZNF852Q6ZMS4 543 aa11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 HFE2Q6ZVN8 426 aa11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 CPA6Q8N4T0 437 aa11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 KIAA1958Q8N8K9 716 aa11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 TMEM35BQ8NCS4 154 aa11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 STK32AQ8WU08 396 aa11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 SLC35F5Q8WV83 523 aa11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 IRGQQ8WZA9 623 aa11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 ATP2A3Q93084 1043 aa11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 MSANTD3Q96H12 275 aa11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 SLC22A12Q96S37 553 aa11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 NELL2Q99435 816 aa11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 ANP32EQ9BTT0 268 aa11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 ULBP1Q9BZM6 244 aa11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 MIS12Q9H081 205 aa11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 C8orf33Q9H7E9 229 aaPredicted RBP11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 CCSER2Q9H7U1 834 aa11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 CYLDQ9NQC7 956 aa11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 ABCC13Q9NSE7 274 aa11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 TBC1D14Q9P2M4 693 aa11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 CCL26Q9Y258 94 aa11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 SIK3Q9Y2K2 1263 aa11.05□□□□□ -0.64
AC012339.1-201ENST00000505564 CAPN9O14815 690 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 CBFA2T2O43439 604 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 GFPT2O94808 682 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 NFATC1O95644 943 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 CALCAP01258 141 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 CYP11B1P15538 503 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 TCF3P15923 654 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 SOX5P35711 763 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 GPD2P43304 727 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 KLK7P49862 253 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 COG7P83436 770 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 FANCCQ00597 558 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 PM20D1Q6GTS8 502 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 PMF1Q6P1K2 205 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 DENND1BQ6P3S1 775 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 KLHDC10Q6PID8 442 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 TPRG1Q6ZUI0 275 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 SLC47A2Q86VL8 602 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 ZNF677Q86XU0 584 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 PASD1Q8IV76 773 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 SCML4Q8N228 414 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 FBXL6Q8N531 539 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 ZNF397Q8NF99 534 aaPredicted RBP11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 IPO4Q8TEX9 1081 aaKnown RBP11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 OSCP1Q8WVF1 389 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 FAM149B1Q96BN6 582 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 ASIC4Q96FT7 647 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 NAA15Q9BXJ9 866 aaKnown RBP11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 RNF38Q9H0F5 515 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 GANQ9H2C0 597 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 LHX5Q9H2C1 402 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 HSD3B7Q9H2F3 369 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 HEBP1Q9NRV9 189 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 CFAP97Q9P2B7 532 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 PIAS3Q9Y6X2 628 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 NOTCH4Q99466 2003 aa11.04□□□□□ -0.64
AC012339.1-201ENST00000505564 A0A1B0GTH6 734 aa11.03□□□□□ -0.64
AC012339.1-201ENST00000505564 A0A1W2PQC6 194 aa11.03□□□□□ -0.64
AC012339.1-201ENST00000505564 E2F8A0AVK6 867 aa11.03□□□□□ -0.64
AC012339.1-201ENST00000505564 FAM187AA6NFU0 413 aa11.03□□□□□ -0.64
AC012339.1-201ENST00000505564 TULP2O00295 520 aa11.03□□□□□ -0.64
AC012339.1-201ENST00000505564 PIK3R2O00459 728 aa11.03□□□□□ -0.64
AC012339.1-201ENST00000505564 LCE2BO14633 110 aa11.03□□□□□ -0.64
AC012339.1-201ENST00000505564 LSM8O95777 96 aaKnown RBP11.03□□□□□ -0.64
AC012339.1-201ENST00000505564 OLFM2O95897 454 aa11.03□□□□□ -0.64
AC012339.1-201ENST00000505564 PNMA6AP0CW24 399 aaPredicted RBP11.03□□□□□ -0.64
AC012339.1-201ENST00000505564 IRF1P10914 325 aa11.03□□□□□ -0.64
AC012339.1-201ENST00000505564 CLCN5P51795 746 aa11.03□□□□□ -0.64
AC012339.1-201ENST00000505564 MLLT6P55198 1093 aaPredicted RBP11.03□□□□□ -0.64
AC012339.1-201ENST00000505564 ARID5AQ03989 594 aa11.03□□□□□ -0.64
AC012339.1-201ENST00000505564 EFEMP1Q12805 493 aa11.03□□□□□ -0.64
AC012339.1-201ENST00000505564 USP4Q13107 963 aa11.03□□□□□ -0.64
AC012339.1-201ENST00000505564 RUNX3Q13761 415 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms