RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 SPATA17Q96L03 361 aa13.84□□□□□ -0.19
LMNA-220ENST00000504687 FMO2Q99518 471 aa13.84□□□□□ -0.19
LMNA-220ENST00000504687 MED4Q9NPJ6 270 aa13.84□□□□□ -0.19
LMNA-220ENST00000504687 MTMR10Q9NXD2 777 aa13.84□□□□□ -0.19
LMNA-220ENST00000504687 STK39Q9UEW8 545 aa13.84□□□□□ -0.19
LMNA-220ENST00000504687 DNPEPQ9ULA0 475 aa13.84□□□□□ -0.19
LMNA-220ENST00000504687 AP4E1Q9UPM8 1137 aa13.84□□□□□ -0.19
LMNA-220ENST00000504687 GREB1Q4ZG55 1949 aa13.84□□□□□ -0.19
LMNA-220ENST00000504687 PPFIA2O75334 1257 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 FAM153BP0C7A2 387 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 USP17L7P0C7H9 530 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 TFE3P19532 575 aaPredicted RBP13.83□□□□□ -0.2
LMNA-220ENST00000504687 STIP1P31948 543 aaKnown RBP13.83□□□□□ -0.2
LMNA-220ENST00000504687 NR2C2P49116 596 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 OTUD4Q01804 1114 aaKnown RBP13.83□□□□□ -0.2
LMNA-220ENST00000504687 CBLBQ13191 982 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 XRCC4Q13426 336 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 KRT81Q14533 505 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 FAM153CQ494X1 144 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 SLC39A12Q504Y0 691 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 RAB6CQ53S08 254 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 SYPL2Q5VXT5 272 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 KAZNQ674X7 775 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 SLC8B1Q6J4K2 584 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 SCYL2Q6P3W7 929 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.83□□□□□ -0.26e-6■□□□□ 8.1
LMNA-220ENST00000504687 CEP128Q6ZU80 1094 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 HFE2Q6ZVN8 426 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 ZNF365Q70YC5 407 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 DEFB128Q7Z7B8 93 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 DDX42Q86XP3 938 aaKnown RBP eCLIP13.83□□□□□ -0.2
LMNA-220ENST00000504687 GSPT2Q8IYD1 628 aaKnown RBP13.83□□□□□ -0.2
LMNA-220ENST00000504687 ARHGAP18Q8N392 663 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 TMEM199Q8N511 208 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 ACTL9Q8TC94 416 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 PIK3R5Q8WYR1 880 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 ACSF2Q96CM8 615 aaPredicted RBP13.83□□□□□ -0.2
LMNA-220ENST00000504687 TTPALQ9BTX7 342 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 TMEM106CQ9BVX2 250 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 CALN1Q9BXU9 219 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 MAK16Q9BXY0 300 aaKnown RBP13.83□□□□□ -0.2
LMNA-220ENST00000504687 RAB6CQ9H0N0 254 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 NEUROG2Q9H2A3 272 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 FBXO44Q9H4M3 255 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 PCDH9Q9HC56 1237 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 WDR6Q9NNW5 1121 aaKnown RBP13.83□□□□□ -0.2
LMNA-220ENST00000504687 ABCC13Q9NSE7 274 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 MTRRQ9UBK8 725 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 MTRF1LQ9UGC7 380 aaKnown RBP13.83□□□□□ -0.2
LMNA-220ENST00000504687 FAM153AQ9UHL3 310 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 SCML2Q9UQR0 700 aa13.83□□□□□ -0.2
LMNA-220ENST00000504687 MYO16Q9Y6X6 1858 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 CFAP69A5D8W1 941 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 M0QYT0 321 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 SMAPO00193 183 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 CAPN9O14815 690 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 TP73O15350 636 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 HTR7P34969 479 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 TNNT3P45378 269 aaPredicted RBP13.82□□□□□ -0.2
LMNA-220ENST00000504687 ALDH7A1P49419 539 aaKnown RBP13.82□□□□□ -0.2
LMNA-220ENST00000504687 CXCR3P49682 368 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 SLC5A3P53794 718 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 DEUP1Q05D60 604 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 CALCOCO2Q13137 446 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 SEMA3BQ13214 749 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 SNX1Q13596 522 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 USP41Q3LFD5 358 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 ZC3H12AQ5D1E8 599 aaKnown RBP13.82□□□□□ -0.2
LMNA-220ENST00000504687 BSPRYQ5W0U4 402 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 MSANTD2Q6P1R3 559 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 LRIG3Q6UXM1 1119 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 TMC3Q7Z5M5 1100 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 RFX6Q8HWS3 928 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 RELL1Q8IUW5 271 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 NUP93Q8N1F7 819 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 ZNF276Q8N554 614 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 PQLC3Q8N755 202 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 PLD5Q8N7P1 536 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 PCDH19Q8TAB3 1148 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 RTP4Q96DX8 246 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 IGSF21Q96ID5 467 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 RHOBTB2Q9BYZ6 727 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 PHACTR1Q9C0D0 580 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 DPH5Q9H2P9 285 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 CALCOCO1Q9P1Z2 691 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 FBXW11Q9UKB1 542 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 NAALADL1Q9UQQ1 740 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 SNX24Q9Y343 169 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 RAD54BQ9Y620 910 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 PTPRSQ13332 1948 aa13.82□□□□□ -0.2
LMNA-220ENST00000504687 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.81□□□□□ -0.2
LMNA-220ENST00000504687 BCLAF3A2AJT9 711 aaKnown RBP13.81□□□□□ -0.2
LMNA-220ENST00000504687 TRIM43BA6NCK2 446 aa13.81□□□□□ -0.2
LMNA-220ENST00000504687 APOL1O14791 398 aa13.81□□□□□ -0.2
LMNA-220ENST00000504687 MCF2LO15068 1137 aa13.81□□□□□ -0.2
LMNA-220ENST00000504687 RTN3O95197 1032 aaPredicted RBP13.81□□□□□ -0.2
LMNA-220ENST00000504687 KRT14P02533 472 aa13.81□□□□□ -0.2
LMNA-220ENST00000504687 NCAM1P13591 858 aa13.81□□□□□ -0.2
LMNA-220ENST00000504687 ATF2P15336 505 aa13.81□□□□□ -0.2
LMNA-220ENST00000504687 EN2P19622 333 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms