RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 GOLGA1Q92805 767 aa12.47□□□□□ -0.41
PDLIM5-208ENST00000504489 RPP25Q9BUL9 199 aaKnown RBP12.47□□□□□ -0.41
PDLIM5-208ENST00000504489 SYNCQ9H7C4 482 aa12.47□□□□□ -0.41
PDLIM5-208ENST00000504489 OLA1Q9NTK5 396 aaKnown RBP12.47□□□□□ -0.41
PDLIM5-208ENST00000504489 ABHD10Q9NUJ1 306 aa12.47□□□□□ -0.41
PDLIM5-208ENST00000504489 SEPT11Q9NVA2 429 aaKnown RBP12.47□□□□□ -0.41
PDLIM5-208ENST00000504489 ZNHIT6Q9NWK9 470 aaKnown RBP12.47□□□□□ -0.41
PDLIM5-208ENST00000504489 ASNSD1Q9NWL6 643 aa12.47□□□□□ -0.41
PDLIM5-208ENST00000504489 DNMT3LQ9UJW3 386 aa12.47□□□□□ -0.41
PDLIM5-208ENST00000504489 NUMBLQ9Y6R0 609 aa12.47□□□□□ -0.41
PDLIM5-208ENST00000504489 MYO18AQ92614 2054 aaKnown RBP12.47□□□□□ -0.41
PDLIM5-208ENST00000504489 TRIOO75962 3097 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 ATG2BQ96BY7 2078 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 HEPACAM2A8MVW5 462 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 DDX3XO00571 662 aaKnown RBP eCLIP12.46□□□□□ -0.418e-10■■■□□ 15.6
PDLIM5-208ENST00000504489 DPYSL4O14531 572 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 TBX18O95935 607 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 FYNP06241 537 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 ASGR2P07307 311 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 MBL2P11226 248 aaPredicted RBP12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 NSFP46459 744 aaKnown RBP12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 YWHAZP63104 245 aaKnown RBP12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 CDK17Q00537 523 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 SLC6A3Q01959 620 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 PTP4A2Q12974 167 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 TDGQ13569 410 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 C10orf120Q5SQS8 335 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 OR6B2Q6IFH4 312 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 MSANTD2Q6P1R3 559 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 OLFML1Q6UWY5 402 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 VITQ6UXI7 678 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 TOGARAM2Q6ZUX3 1019 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 SLC26A9Q7LBE3 791 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 VPS36Q86VN1 386 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 DDX42Q86XP3 938 aaKnown RBP eCLIP12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 XYLT1Q86Y38 959 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 SLC44A3Q8N4M1 653 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 TC2NQ8N9U0 490 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 DEPDC1BQ8WUY9 529 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 RSAD2Q8WXG1 361 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 RSPRY1Q96DX4 576 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 VCPIP1Q96JH7 1222 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 LRRC3BQ96PB8 259 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 KXD1Q9BQD3 176 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 PLA2G2FQ9BZM2 168 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 NACA2Q9H009 215 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 SMG9Q9H0W8 520 aaKnown RBP12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 ARHGAP20Q9P2F6 1191 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 STRIP2Q9ULQ0 834 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 SORCS3Q9UPU3 1222 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 CCL26Q9Y258 94 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 VCANP13611 3396 aa12.46□□□□□ -0.41
PDLIM5-208ENST00000504489 F5P12259 2224 aa12.46□□□□□ -0.42
PDLIM5-208ENST00000504489 KIAA1549LQ6ZVL6 1849 aa12.46□□□□□ -0.42
PDLIM5-208ENST00000504489 TECTAO75443 2155 aa12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 SSU72P8A0A1W2PR75 194 aa12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 GOLGA6L3A6NEY3 463 aa12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 HSF2BPO75031 334 aa12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 RTN2O75298 545 aa12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 CALB1P05937 261 aa12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 PLEKP08567 350 aaPredicted RBP12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 PSMC3P17980 439 aa12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 GSCP56915 257 aaPredicted RBP12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 LSM11P83369 360 aaKnown RBP eCLIP12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 ZXDBP98169 803 aa12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 GOLGA8FQ08AF8 430 aa12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 GOLGA8DPQ0D2H9 430 aa12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 FCHO2Q0JRZ9 810 aa12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 USP4Q13107 963 aa12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 ZNF77Q15935 545 aa12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 MMS22LQ6ZRQ5 1243 aa12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 MON1BQ7L1V2 547 aa12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 RSRC2Q7L4I2 434 aaKnown RBP12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 ARCQ7LC44 396 aa12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 ST13P5Q8NFI4 369 aaPredicted RBP12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 BPIFB1Q8TDL5 484 aa12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 SH3RF2Q8TEC5 729 aa12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 RNF139Q8WU17 664 aa12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 EDEM1Q92611 657 aa12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 FAM149B1Q96BN6 582 aa12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 PIWIL1Q96J94 861 aaKnown RBP12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 ZFRQ96KR1 1074 aaKnown RBP12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 TRMT61BQ9BVS5 477 aaKnown RBP12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 KLF16Q9BXK1 252 aaPredicted RBP12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 GRPEL1Q9HAV7 217 aa12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 POPDC2Q9HBU9 364 aa12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 ADAM22Q9P0K1 906 aa12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 MARCH2Q9P0N8 246 aa12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 WDR35Q9P2L0 1181 aa12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 IMPACTQ9P2X3 320 aa12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 ADAMTS1Q9UHI8 967 aa12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 NUDT5Q9UKK9 219 aa12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 CPQQ9Y646 472 aa12.45□□□□□ -0.42
PDLIM5-208ENST00000504489 LEFTY2O00292 366 aa12.44□□□□□ -0.42
PDLIM5-208ENST00000504489 NCAM1P13591 858 aa12.44□□□□□ -0.42
PDLIM5-208ENST00000504489 EIF4A3P38919 411 aaKnown RBP12.44□□□□□ -0.42
PDLIM5-208ENST00000504489 COG7P83436 770 aa12.44□□□□□ -0.42
PDLIM5-208ENST00000504489 EFEMP1Q12805 493 aa12.44□□□□□ -0.42
PDLIM5-208ENST00000504489 TAF5Q15542 800 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms