RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 MKRN2Q9H000 416 aaKnown RBP16.76■□□□□ 0.27
PDLIM7-210ENST00000503827 MRPL44Q9H9J2 332 aaKnown RBP16.76■□□□□ 0.27
PDLIM7-210ENST00000503827 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.76■□□□□ 0.276e-7■■■■■ 67.2
PDLIM7-210ENST00000503827 TMEM30AQ9NV96 361 aa16.76■□□□□ 0.27
PDLIM7-210ENST00000503827 INTS13Q9NVM9 706 aa16.76■□□□□ 0.27
PDLIM7-210ENST00000503827 MARK1Q9P0L2 795 aa16.76■□□□□ 0.27
PDLIM7-210ENST00000503827 GMIPQ9P107 970 aa16.76■□□□□ 0.27
PDLIM7-210ENST00000503827 FTSJ1Q9UET6 329 aa16.76■□□□□ 0.27
PDLIM7-210ENST00000503827 SNX11Q9Y5W9 270 aa16.76■□□□□ 0.27
PDLIM7-210ENST00000503827 AK5Q9Y6K8 562 aa16.76■□□□□ 0.27
PDLIM7-210ENST00000503827 ZNF462Q96JM2 2506 aa16.76■□□□□ 0.27
PDLIM7-210ENST00000503827 NPC1O15118 1278 aa16.75■□□□□ 0.27
PDLIM7-210ENST00000503827 TLX3O43711 291 aaPredicted RBP16.75■□□□□ 0.27
PDLIM7-210ENST00000503827 ACADMP11310 421 aa16.75■□□□□ 0.27
PDLIM7-210ENST00000503827 CCT8P50990 548 aa16.75■□□□□ 0.27
PDLIM7-210ENST00000503827 KCNA1Q09470 495 aa16.75■□□□□ 0.27
PDLIM7-210ENST00000503827 L1TD1Q5T7N2 865 aaKnown RBP16.75■□□□□ 0.27
PDLIM7-210ENST00000503827 MCTP1Q6DN14 999 aa16.75■□□□□ 0.27
PDLIM7-210ENST00000503827 TMPRSS6Q8IU80 811 aa16.75■□□□□ 0.27
PDLIM7-210ENST00000503827 SNX19Q92543 992 aa16.75■□□□□ 0.27
PDLIM7-210ENST00000503827 STRA6Q9BX79 667 aa16.75■□□□□ 0.27
PDLIM7-210ENST00000503827 PCED1AQ9H1Q7 454 aa16.75■□□□□ 0.27
PDLIM7-210ENST00000503827 KNL1Q8NG31 2342 aa16.75■□□□□ 0.27
PDLIM7-210ENST00000503827 PTPRQQ9UMZ3 2332 aa16.75■□□□□ 0.27
PDLIM7-210ENST00000503827 CKAP5Q14008 2032 aa16.74■□□□□ 0.27
PDLIM7-210ENST00000503827 CLDN5O00501 218 aa16.74■□□□□ 0.27
PDLIM7-210ENST00000503827 PCDHGA12O60330 932 aa16.74■□□□□ 0.27
PDLIM7-210ENST00000503827 SYNCRIPO60506 623 aaKnown RBP16.74■□□□□ 0.27
PDLIM7-210ENST00000503827 IGLV3-19P01714 112 aa16.74■□□□□ 0.27
PDLIM7-210ENST00000503827 CISD3P0C7P0 127 aa16.74■□□□□ 0.27
PDLIM7-210ENST00000503827 DDIT3P35638 169 aa16.74■□□□□ 0.27
PDLIM7-210ENST00000503827 GOLGA8FQ08AF8 430 aa16.74■□□□□ 0.27
PDLIM7-210ENST00000503827 GOLGA8DPQ0D2H9 430 aa16.74■□□□□ 0.27
PDLIM7-210ENST00000503827 DUOXA2Q1HG44 320 aa16.74■□□□□ 0.27
PDLIM7-210ENST00000503827 DYMQ7RTS9 669 aa16.74■□□□□ 0.27
PDLIM7-210ENST00000503827 SYCP3Q8IZU3 236 aa16.74■□□□□ 0.27
PDLIM7-210ENST00000503827 OR5B17Q8NGF7 314 aa16.74■□□□□ 0.27
PDLIM7-210ENST00000503827 SCAMP5Q8TAC9 235 aa16.74■□□□□ 0.27
PDLIM7-210ENST00000503827 IGSF8Q969P0 613 aa16.74■□□□□ 0.27
PDLIM7-210ENST00000503827 MRPL45Q9BRJ2 306 aaKnown RBP16.74■□□□□ 0.27
PDLIM7-210ENST00000503827 B3GNT5Q9BYG0 378 aa16.74■□□□□ 0.27
PDLIM7-210ENST00000503827 SEL1LQ9UBV2 794 aa16.74■□□□□ 0.27
PDLIM7-210ENST00000503827 LSM7Q9UK45 103 aaKnown RBP16.74■□□□□ 0.27
PDLIM7-210ENST00000503827 ANKRD6Q9Y2G4 727 aa16.74■□□□□ 0.27
PDLIM7-210ENST00000503827 COL5A1P20908 1838 aaPredicted RBP16.74■□□□□ 0.27
PDLIM7-210ENST00000503827 TACC1O75410 805 aa16.73■□□□□ 0.27
PDLIM7-210ENST00000503827 PRPF6O94906 941 aaKnown RBP16.73■□□□□ 0.27
PDLIM7-210ENST00000503827 FAM163BP0C2L3 166 aa16.73■□□□□ 0.27
PDLIM7-210ENST00000503827 CDK4P11802 303 aa16.73■□□□□ 0.27
PDLIM7-210ENST00000503827 SURF1Q15526 300 aa16.73■□□□□ 0.27
PDLIM7-210ENST00000503827 GPD1LQ8N335 351 aa16.73■□□□□ 0.27
PDLIM7-210ENST00000503827 UCMAQ8WVF2 138 aa16.73■□□□□ 0.27
PDLIM7-210ENST00000503827 ZSCAN31Q96LW9 406 aaPredicted RBP16.73■□□□□ 0.27
PDLIM7-210ENST00000503827 KCNK16Q96T55 309 aa16.73■□□□□ 0.27
PDLIM7-210ENST00000503827 CBWD1Q9BRT8 395 aa16.73■□□□□ 0.27
PDLIM7-210ENST00000503827 TRIM9Q9C026 710 aa16.73■□□□□ 0.27
PDLIM7-210ENST00000503827 PCIF1Q9H4Z3 704 aa16.73■□□□□ 0.27
PDLIM7-210ENST00000503827 COMMD8Q9NX08 183 aa16.73■□□□□ 0.27
PDLIM7-210ENST00000503827 NME7Q9Y5B8 376 aa16.73■□□□□ 0.27
PDLIM7-210ENST00000503827 PCDHGA1Q9Y5H4 931 aa16.73■□□□□ 0.27
PDLIM7-210ENST00000503827 ATP8B3O60423 1300 aa16.72■□□□□ 0.27
PDLIM7-210ENST00000503827 PTPRJQ12913 1337 aa16.72■□□□□ 0.27
PDLIM7-210ENST00000503827 CFAP46Q8IYW2 2715 aa16.72■□□□□ 0.27
PDLIM7-210ENST00000503827 A8MXQ7 604 aa16.72■□□□□ 0.27
PDLIM7-210ENST00000503827 KCNK3O14649 394 aa16.72■□□□□ 0.27
PDLIM7-210ENST00000503827 TLR5O60602 858 aa16.72■□□□□ 0.27
PDLIM7-210ENST00000503827 GCNT3O95395 438 aa16.72■□□□□ 0.27
PDLIM7-210ENST00000503827 ZDHHC11BP0C7U3 371 aa16.72■□□□□ 0.27
PDLIM7-210ENST00000503827 IL12RB1P42701 662 aa16.72■□□□□ 0.27
PDLIM7-210ENST00000503827 GRIA4P48058 902 aa16.72■□□□□ 0.27
PDLIM7-210ENST00000503827 SLC5A3P53794 718 aa16.72■□□□□ 0.27
PDLIM7-210ENST00000503827 ORC1Q13415 861 aa16.72■□□□□ 0.27
PDLIM7-210ENST00000503827 E2F5Q15329 346 aa16.72■□□□□ 0.27
PDLIM7-210ENST00000503827 B3GALNT2Q8NCR0 500 aa16.72■□□□□ 0.27
PDLIM7-210ENST00000503827 SNIP1Q8TAD8 396 aaKnown RBP16.72■□□□□ 0.27
PDLIM7-210ENST00000503827 KLF16Q9BXK1 252 aaPredicted RBP16.72■□□□□ 0.27
PDLIM7-210ENST00000503827 NRSN2Q9GZP1 204 aa16.72■□□□□ 0.27
PDLIM7-210ENST00000503827 DPEP3Q9H4B8 488 aa16.72■□□□□ 0.27
PDLIM7-210ENST00000503827 OSGEPQ9NPF4 335 aa16.72■□□□□ 0.27
PDLIM7-210ENST00000503827 TBC1D7Q9P0N9 293 aa16.72■□□□□ 0.27
PDLIM7-210ENST00000503827 THAP10Q9P2Z0 257 aaPredicted RBP16.72■□□□□ 0.27
PDLIM7-210ENST00000503827 PCDHB13Q9Y5F0 798 aa16.72■□□□□ 0.27
PDLIM7-210ENST00000503827 MYO18BQ8IUG5 2567 aa16.72■□□□□ 0.27
PDLIM7-210ENST00000503827 H0Y8X5 98 aa16.71■□□□□ 0.27
PDLIM7-210ENST00000503827 ERVH48-1M5A8F1 160 aa16.71■□□□□ 0.27
PDLIM7-210ENST00000503827 DFNA5O60443 496 aa16.71■□□□□ 0.27
PDLIM7-210ENST00000503827 GREM1O60565 184 aa16.71■□□□□ 0.27
PDLIM7-210ENST00000503827 GAP43P17677 238 aa16.71■□□□□ 0.27
PDLIM7-210ENST00000503827 CDH8P55286 799 aa16.71■□□□□ 0.27
PDLIM7-210ENST00000503827 TNNC1P63316 161 aa16.71■□□□□ 0.27
PDLIM7-210ENST00000503827 ENPP2Q13822 863 aa16.71■□□□□ 0.27
PDLIM7-210ENST00000503827 RTP5Q14D33 572 aa16.71■□□□□ 0.27
PDLIM7-210ENST00000503827 TAF1BQ53T94 588 aaPredicted RBP16.71■□□□□ 0.27
PDLIM7-210ENST00000503827 FAM124AQ86V42 546 aa16.71■□□□□ 0.27
PDLIM7-210ENST00000503827 BHMTQ93088 406 aa16.71■□□□□ 0.27
PDLIM7-210ENST00000503827 MED10Q9BTT4 135 aa16.71■□□□□ 0.27
PDLIM7-210ENST00000503827 CLMPQ9H6B4 373 aa16.71■□□□□ 0.27
PDLIM7-210ENST00000503827 TM9SF3Q9HD45 589 aa16.71■□□□□ 0.27
PDLIM7-210ENST00000503827 PLK2Q9NYY3 685 aa16.71■□□□□ 0.27
PDLIM7-210ENST00000503827 IL37Q9NZH6 218 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms