RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 INPP1P49441 399 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 HARS2P49590 506 aaKnown RBP4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 GUCY1A3Q02108 690 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 PDAP1Q13442 181 aaKnown RBP4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 TOP3AQ13472 1001 aaPredicted RBP4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 USP10Q14694 798 aaKnown RBP4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 PKN2Q16513 984 aaKnown RBP4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 GOLGA7BQ2TAP0 167 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 BRMS1LQ5PSV4 323 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 ZDHHC20Q5W0Z9 365 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 DUPD1Q68J44 220 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 IRGCQ6NXR0 463 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 CYB5D1Q6P9G0 228 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 ITIH5Q86UX2 942 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 HERC6Q8IVU3 1022 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 NKX2-3Q8TAU0 364 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 CKAP2Q8WWK9 683 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 CASP10Q92851 521 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 NKD2Q969F2 451 aaPredicted RBP4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 SLC9A7Q96T83 725 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 TARS2Q9BW92 718 aaKnown RBP4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 ADGRE3Q9BY15 652 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 NIFKQ9BYG3 293 aaKnown RBP4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 IL22Q9GZX6 179 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 ZNF408Q9H9D4 720 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 NMRAL1Q9HBL8 299 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 SLC40A1Q9NP59 571 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 KRCC1Q9NPI7 259 aaPredicted RBP4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 CISHQ9NSE2 258 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 KCTD5Q9NXV2 234 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 SCN3BQ9NY72 215 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 GTSE1Q9NYZ3 720 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 PHTF1Q9UMS5 762 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 USP18Q9UMW8 372 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 MFHAS1Q9Y4C4 1052 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 NRCAMQ92823 1304 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 TBC1D4O60343 1298 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 DIAPH2O60879 1101 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 TPSB2P20231 275 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 KCNA4P22459 653 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 MMP13P45452 471 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 KCNK10P57789 538 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 ZNF33AQ06730 810 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 DDR1Q08345 913 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 CYLC2Q14093 348 aaPredicted RBP4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 TPSAB1Q15661 275 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 CNGA3Q16281 694 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 ARHGAP15Q53QZ3 475 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 MIIPQ5JXC2 388 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 FBXO47Q5MNV8 452 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 ZC3H18Q86VM9 953 aaKnown RBP4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 DDX42Q86XP3 938 aaKnown RBP eCLIP4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 LEMD2Q8NC56 503 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 ZNF606Q8WXB4 792 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 ART4Q93070 314 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 ATG4CQ96DT6 458 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 SPDL1Q96EA4 605 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 FGD4Q96M96 766 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 PNKPQ96T60 521 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 APOL6Q9BWW8 343 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 LACRTQ9GZZ8 138 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 SPATC1LQ9H0A9 340 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 SENP2Q9HC62 589 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 LRRC4BQ9NT99 713 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 SNTG2Q9NY99 539 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 LMCD1Q9NZU5 365 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 MAGED2Q9UNF1 606 aaPredicted RBP4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 PIN4Q9Y237 131 aaKnown RBP4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 EIF3LQ9Y262 564 aaKnown RBP4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 SLC45A1Q9Y2W3 748 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 ACOT9Q9Y305 439 aa4.9□□□□□ -1.63
NDFIP1-202ENST00000503388 SIP14410 1827 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 RNF103-CHMP3A0A140T963 221 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 SPATA31C2B4DYI2 1134 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 ZNF263O14978 683 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 TRIM66O15016 1216 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 PRPF4O43172 522 aaKnown RBP eCLIP4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 DDHD2O94830 711 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 RRM1P23921 792 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 GMPSP49915 693 aaPredicted RBP4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 ALDH5A1P51649 535 aaPredicted RBP4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 SLC6A3Q01959 620 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 GRM3Q14832 879 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 TRIP13Q15645 432 aaPredicted RBP4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 HIST2H2ACQ16777 129 aaPredicted RBP4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 CDO1Q16878 200 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 TBC1D10BQ4KMP7 808 aaPredicted RBP4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 EPC2Q52LR7 807 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 LACTB2Q53H82 288 aaPredicted RBP4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 FASTKD1Q53R41 847 aaKnown RBP4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 NOL9Q5SY16 702 aaKnown RBP4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 HIST2H2AA3Q6FI13 130 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 PASD1Q8IV76 773 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 REPS2Q8NFH8 660 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 DNAJB8Q8NHS0 232 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 EPS8L1Q8TE68 723 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 TADA1Q96BN2 335 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 SMARCD1Q96GM5 515 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms