RNA–Protein interactions for RNA: ENST00000502254.5

PTPN20-212, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-212ENST00000502254 TMEM176AQ96HP8 235 aa5.91□□□□□ -1.46
PTPN20-212ENST00000502254 FAXDC2Q96IV6 333 aa5.91□□□□□ -1.46
PTPN20-212ENST00000502254 RNPC3Q96LT9 517 aaKnown RBP5.91□□□□□ -1.46
PTPN20-212ENST00000502254 HEXIM2Q96MH2 286 aaKnown RBP5.91□□□□□ -1.46
PTPN20-212ENST00000502254 TWNKQ96RR1 684 aa5.91□□□□□ -1.46
PTPN20-212ENST00000502254 SLC9A7Q96T83 725 aa5.91□□□□□ -1.46
PTPN20-212ENST00000502254 COLEC11Q9BWP8 271 aa5.91□□□□□ -1.46
PTPN20-212ENST00000502254 ELOVL4Q9GZR5 314 aa5.91□□□□□ -1.46
PTPN20-212ENST00000502254 MRPL18Q9H0U6 180 aaKnown RBP5.91□□□□□ -1.46
PTPN20-212ENST00000502254 CYP4F12Q9HCS2 524 aa5.91□□□□□ -1.46
PTPN20-212ENST00000502254 ST7Q9NRC1 585 aa5.91□□□□□ -1.46
PTPN20-212ENST00000502254 TRMT1Q9NXH9 659 aaKnown RBP5.91□□□□□ -1.46
PTPN20-212ENST00000502254 GDAP2Q9NXN4 497 aa5.91□□□□□ -1.46
PTPN20-212ENST00000502254 MKL2Q9ULH7 1088 aa5.91□□□□□ -1.46
PTPN20-212ENST00000502254 ZKSCAN5Q9Y2L8 839 aa5.91□□□□□ -1.46
PTPN20-212ENST00000502254 EPN1Q9Y6I3 576 aaPredicted RBP5.91□□□□□ -1.46
PTPN20-212ENST00000502254 SLC4A7Q9Y6M7 1214 aa5.91□□□□□ -1.46
PTPN20-212ENST00000502254 CENPFP49454 3210 aa5.91□□□□□ -1.46
PTPN20-212ENST00000502254 A0A087X0T9 212 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 SSU72P8A0A1W2PR75 194 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 EIF3CLB5ME19 914 aaKnown RBP5.9□□□□□ -1.46
PTPN20-212ENST00000502254 PIK3R2O00459 728 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 DDX3XO00571 662 aaKnown RBP eCLIP5.9□□□□□ -1.46
PTPN20-212ENST00000502254 PDPK1O15530 556 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 WIPF1O43516 503 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 TRAPPC3O43617 180 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 ATP2C2O75185 946 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 TACC1O75410 805 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 GALTP07902 379 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 FAM228BP0C875 321 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 VDRP11473 427 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 ATP2A2P16615 1042 aaKnown RBP5.9□□□□□ -1.46
PTPN20-212ENST00000502254 CHRNB2P17787 502 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 PAX3P23760 479 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 ACAT1P24752 427 aaKnown RBP5.9□□□□□ -1.46
PTPN20-212ENST00000502254 LMO2P25791 158 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 MSNP26038 577 aaKnown RBP5.9□□□□□ -1.46
PTPN20-212ENST00000502254 TKTP29401 623 aaKnown RBP5.9□□□□□ -1.46
PTPN20-212ENST00000502254 CCNFP41002 786 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 MAGEA1P43355 309 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 MAGEA10P43363 369 aaPredicted RBP5.9□□□□□ -1.46
PTPN20-212ENST00000502254 ALDH7A1P49419 539 aaKnown RBP5.9□□□□□ -1.46
PTPN20-212ENST00000502254 ZNF132P52740 706 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 PSMC1P62191 440 aaKnown RBP5.9□□□□□ -1.46
PTPN20-212ENST00000502254 KRT83P78385 493 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 CDR2Q01850 454 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 PPP2R5EQ16537 467 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 SGO2Q562F6 1265 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 ACAD11Q709F0 780 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 KIAA1328Q86T90 577 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 ZSCAN30Q86W11 494 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 DNAAF5Q86Y56 855 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 HID1Q8IV36 788 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 PASD1Q8IV76 773 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 TTC39CQ8N584 583 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 TOP6BLQ8N6T0 577 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 SLC4A11Q8NBS3 891 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 LNX1Q8TBB1 728 aaPredicted RBP5.9□□□□□ -1.46
PTPN20-212ENST00000502254 KBTBD7Q8WVZ9 684 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 ZNF606Q8WXB4 792 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 RSPH1Q8WYR4 309 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 HERVK_113Q902F9 699 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 TFAP2BQ92481 460 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 ZNF689Q96CS4 500 aaPredicted RBP5.9□□□□□ -1.46
PTPN20-212ENST00000502254 ZNF558Q96NG5 402 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 PCDHB18PQ96TA0 734 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 EIF3CQ99613 913 aaKnown RBP5.9□□□□□ -1.46
PTPN20-212ENST00000502254 TMEM175Q9BSA9 504 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 DNAI2Q9GZS0 605 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 MTIF3Q9H2K0 278 aaKnown RBP5.9□□□□□ -1.46
PTPN20-212ENST00000502254 ATXN3LQ9H3M9 355 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 DPEP3Q9H4B8 488 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 CWH43Q9H720 699 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 FBRSQ9HAH7 460 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 FAM49BQ9NUQ9 324 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 NOCTQ9UK39 431 aaKnown RBP5.9□□□□□ -1.46
PTPN20-212ENST00000502254 ADAM28Q9UKQ2 775 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 CNTN6Q9UQ52 1028 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 PPP2R2CQ9Y2T4 447 aa5.9□□□□□ -1.46
PTPN20-212ENST00000502254 MRPL42Q9Y6G3 142 aaKnown RBP5.9□□□□□ -1.46
PTPN20-212ENST00000502254 A0A0U1RQJ8 604 aa5.89□□□□□ -1.47
PTPN20-212ENST00000502254 ARHGEF37A1IGU5 675 aa5.89□□□□□ -1.47
PTPN20-212ENST00000502254 USP27XA6NNY8 438 aa5.89□□□□□ -1.47
PTPN20-212ENST00000502254 F8W735 103 aaPredicted RBP5.89□□□□□ -1.47
PTPN20-212ENST00000502254 TMEM189-UBE2V1I3L0A0 370 aa5.89□□□□□ -1.47
PTPN20-212ENST00000502254 M0QZQ0 153 aa5.89□□□□□ -1.47
PTPN20-212ENST00000502254 ZNF263O14978 683 aa5.89□□□□□ -1.47
PTPN20-212ENST00000502254 ZSCAN12O43309 604 aa5.89□□□□□ -1.47
PTPN20-212ENST00000502254 MED7O43513 233 aa5.89□□□□□ -1.47
PTPN20-212ENST00000502254 GJB6O95452 261 aa5.89□□□□□ -1.47
PTPN20-212ENST00000502254 PAEPP09466 180 aa5.89□□□□□ -1.47
PTPN20-212ENST00000502254 CCDC175P0C221 793 aa5.89□□□□□ -1.47
PTPN20-212ENST00000502254 FAM163BP0C2L3 166 aa5.89□□□□□ -1.47
PTPN20-212ENST00000502254 CCDC130P13994 396 aa5.89□□□□□ -1.47
PTPN20-212ENST00000502254 PTPN1P18031 435 aaKnown RBP5.89□□□□□ -1.47
PTPN20-212ENST00000502254 LAG3P18627 525 aa5.89□□□□□ -1.47
PTPN20-212ENST00000502254 HSD3B2P26439 372 aa5.89□□□□□ -1.47
PTPN20-212ENST00000502254 ADORA2BP29275 332 aa5.89□□□□□ -1.47
PTPN20-212ENST00000502254 LHX1P48742 406 aa5.89□□□□□ -1.47
PTPN20-212ENST00000502254 AARSP49588 968 aaKnown RBP eCLIP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms