RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 PSTPIP2Q9H939 334 aa5.62□□□□□ -1.51
FXN-205ENST00000498653 CYP4F11Q9HBI6 524 aa5.62□□□□□ -1.51
FXN-205ENST00000498653 JPH1Q9HDC5 661 aaPredicted RBP5.62□□□□□ -1.51
FXN-205ENST00000498653 RIC8AQ9NPQ8 531 aa5.62□□□□□ -1.51
FXN-205ENST00000498653 GJB4Q9NTQ9 266 aa5.62□□□□□ -1.51
FXN-205ENST00000498653 CHMP5Q9NZZ3 219 aa5.62□□□□□ -1.51
FXN-205ENST00000498653 EIF2B4Q9UI10 523 aaKnown RBP5.62□□□□□ -1.51
FXN-205ENST00000498653 ADAM21Q9UKJ8 722 aa5.62□□□□□ -1.51
FXN-205ENST00000498653 PCDHA4Q9UN74 947 aa5.62□□□□□ -1.51
FXN-205ENST00000498653 SLC5A6Q9Y289 635 aa5.62□□□□□ -1.51
FXN-205ENST00000498653 PCDHGC4Q9Y5F7 938 aa5.62□□□□□ -1.51
FXN-205ENST00000498653 BACE2Q9Y5Z0 518 aa5.62□□□□□ -1.51
FXN-205ENST00000498653 MYH9P35579 1960 aaKnown RBP5.62□□□□□ -1.51
FXN-205ENST00000498653 A0A1W2PQF6 199 aa5.61□□□□□ -1.51
FXN-205ENST00000498653 LAD1O00515 517 aa5.61□□□□□ -1.51
FXN-205ENST00000498653 FOSP01100 380 aaPredicted RBP5.61□□□□□ -1.51
FXN-205ENST00000498653 ZSCAN22P10073 491 aaPredicted RBP5.61□□□□□ -1.51
FXN-205ENST00000498653 SFPQP23246 707 aaKnown RBP eCLIP5.61□□□□□ -1.51
FXN-205ENST00000498653 DDIT3P35638 169 aa5.61□□□□□ -1.51
FXN-205ENST00000498653 QARSP47897 775 aaKnown RBP5.61□□□□□ -1.51
FXN-205ENST00000498653 GRIA4P48058 902 aa5.61□□□□□ -1.51
FXN-205ENST00000498653 SLC26A2P50443 739 aa5.61□□□□□ -1.51
FXN-205ENST00000498653 ACTR2P61160 394 aa5.61□□□□□ -1.51
FXN-205ENST00000498653 UBE2SQ16763 222 aa5.61□□□□□ -1.51
FXN-205ENST00000498653 C11orf91Q3C1V1 193 aa5.61□□□□□ -1.51
FXN-205ENST00000498653 SFMBT2Q5VUG0 894 aa5.61□□□□□ -1.51
FXN-205ENST00000498653 JAKMIP3Q5VZ66 844 aa5.61□□□□□ -1.51
FXN-205ENST00000498653 PCNX4Q63HM2 1172 aa5.61□□□□□ -1.51
FXN-205ENST00000498653 REXO1Q8N1G1 1221 aaKnown RBP5.61□□□□□ -1.51
FXN-205ENST00000498653 CPA6Q8N4T0 437 aa5.61□□□□□ -1.51
FXN-205ENST00000498653 FOXD4L4Q8WXT5 416 aaPredicted RBP5.61□□□□□ -1.51
FXN-205ENST00000498653 ABHD17AQ96GS6 310 aa5.61□□□□□ -1.51
FXN-205ENST00000498653 SCLT1Q96NL6 688 aa5.61□□□□□ -1.51
FXN-205ENST00000498653 MAP7D2Q96T17 732 aa5.61□□□□□ -1.51
FXN-205ENST00000498653 SMR3AQ99954 134 aa5.61□□□□□ -1.51
FXN-205ENST00000498653 SLC12A9Q9BXP2 914 aa5.61□□□□□ -1.51
FXN-205ENST00000498653 SLC6A17Q9H1V8 727 aa5.61□□□□□ -1.51
FXN-205ENST00000498653 FOXP1Q9H334 677 aaPredicted RBP5.61□□□□□ -1.51
FXN-205ENST00000498653 SEMA6CQ9H3T2 930 aa5.61□□□□□ -1.51
FXN-205ENST00000498653 ZSCAN16Q9H4T2 348 aaPredicted RBP5.61□□□□□ -1.51
FXN-205ENST00000498653 AGPAT5Q9NUQ2 364 aa5.61□□□□□ -1.51
FXN-205ENST00000498653 ACSL6Q9UKU0 697 aa5.61□□□□□ -1.51
FXN-205ENST00000498653 PNMA8BQ9ULN7 279 aaPredicted RBP5.61□□□□□ -1.51
FXN-205ENST00000498653 MTMR6Q9Y217 621 aa5.61□□□□□ -1.51
FXN-205ENST00000498653 ABCA4P78363 2273 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 NUMA1Q14980 2115 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 SPDYE3A6NKU9 549 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 RNF212BA8MTL3 300 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 BTBD18B2RXH4 712 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 PRSS44E7EML9 344 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 TGFBR3LH3BV60 316 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 K7EM74 188 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 MEIS2O14770 477 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 OPA1O60313 960 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 F13A1P00488 732 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 ITGB3P05106 788 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 ITGA2BP08514 1039 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 FAM157BP0CG42 384 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 EPB42P16452 691 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 IGFBP6P24592 240 aaPredicted RBP5.6□□□□□ -1.51
FXN-205ENST00000498653 BRD2P25440 801 aaKnown RBP5.6□□□□□ -1.51
FXN-205ENST00000498653 CD6P30203 668 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 ELF1P32519 619 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 CYP4F8P98187 520 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 E2F1Q01094 437 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 GRIN1Q05586 938 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 FOXD4Q12950 439 aaPredicted RBP5.6□□□□□ -1.51
FXN-205ENST00000498653 RESTQ13127 1097 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 AP3B2Q13367 1082 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 PDGFRLQ15198 375 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 NPY5RQ15761 445 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 INF2Q27J81 1249 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 ISXQ2M1V0 245 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 EFCAB12Q6NXP0 572 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 USP17L6PQ6QN14 398 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 TREML4Q6UXN2 200 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 BRAPQ7Z569 592 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 NLRX1Q86UT6 975 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 FERMT3Q86UX7 667 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 NOSTRINQ8IVI9 506 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 CCDC60Q8IWA6 550 aaPredicted RBP5.6□□□□□ -1.51
FXN-205ENST00000498653 ZNF276Q8N554 614 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 CADM4Q8NFZ8 388 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 HPS3Q969F9 1004 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 TOE1Q96GM8 510 aaKnown RBP5.6□□□□□ -1.51
FXN-205ENST00000498653 ATXN7L3BQ96GX2 97 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 SUSD3Q96L08 255 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 GPR174Q9BXC1 333 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 ANO3Q9BYT9 981 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 ZCCHC2Q9C0B9 1178 aaKnown RBP5.6□□□□□ -1.51
FXN-205ENST00000498653 WSB2Q9NYS7 404 aaPredicted RBP5.6□□□□□ -1.51
FXN-205ENST00000498653 SLC9A2Q9UBY0 812 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 NOL7Q9UMY1 257 aaKnown RBP5.6□□□□□ -1.51
FXN-205ENST00000498653 PCDHA6Q9UN73 950 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 TP53TG5Q9Y2B4 290 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 YIPF1Q9Y548 306 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 PCDHA8Q9Y5H6 950 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 ATP6V1DQ9Y5K8 247 aa5.6□□□□□ -1.51
FXN-205ENST00000498653 METTL12A8MUP2 240 aa5.59□□□□□ -1.51
FXN-205ENST00000498653 ADAMTS3O15072 1205 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms