RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 LOC105369274A0A096LPK9 316 aa9.06□□□□□ -0.96
SNX13-212ENST00000498463 LOC102723532A0A0G2JNH3 316 aa9.06□□□□□ -0.96
SNX13-212ENST00000498463 C9orf118A6NHY6 69 aa9.06□□□□□ -0.96
SNX13-212ENST00000498463 GJB3O75712 270 aa9.06□□□□□ -0.96
SNX13-212ENST00000498463 ADRB2P07550 413 aa9.06□□□□□ -0.96
SNX13-212ENST00000498463 FAM3BP58499 235 aaPredicted RBP9.06□□□□□ -0.96
SNX13-212ENST00000498463 NLRP5P59047 1200 aa9.06□□□□□ -0.96
SNX13-212ENST00000498463 RNASELQ05823 741 aaKnown RBP9.06□□□□□ -0.96
SNX13-212ENST00000498463 E2F2Q14209 437 aa9.06□□□□□ -0.96
SNX13-212ENST00000498463 SLC22A25Q6T423 547 aa9.06□□□□□ -0.96
SNX13-212ENST00000498463 OR4N4Q8N0Y3 316 aa9.06□□□□□ -0.96
SNX13-212ENST00000498463 OR52N2Q8NGI0 321 aa9.06□□□□□ -0.96
SNX13-212ENST00000498463 CXorf38Q8TB03 319 aa9.06□□□□□ -0.96
SNX13-212ENST00000498463 ZNF483Q8TF39 744 aaPredicted RBP9.06□□□□□ -0.96
SNX13-212ENST00000498463 USP6NLQ92738 828 aa9.06□□□□□ -0.96
SNX13-212ENST00000498463 PNKPQ96T60 521 aa9.06□□□□□ -0.96
SNX13-212ENST00000498463 MXD3Q9BW11 206 aa9.06□□□□□ -0.96
SNX13-212ENST00000498463 HSFX1Q9UBD0 423 aa9.06□□□□□ -0.96
SNX13-212ENST00000498463 RPS6KA6Q9UK32 745 aa9.06□□□□□ -0.96
SNX13-212ENST00000498463 CLSPNQ9HAW4 1339 aa9.05□□□□□ -0.96
SNX13-212ENST00000498463 AGAP14A8MT82 685 aa9.05□□□□□ -0.96
SNX13-212ENST00000498463 M0QYT0 321 aa9.05□□□□□ -0.96
SNX13-212ENST00000498463 TSPAN4O14817 238 aa9.05□□□□□ -0.96
SNX13-212ENST00000498463 CTIFO43310 598 aaKnown RBP9.05□□□□□ -0.96
SNX13-212ENST00000498463 ANP32CO43423 234 aa9.05□□□□□ -0.96
SNX13-212ENST00000498463 SUN1O94901 812 aa9.05□□□□□ -0.96
SNX13-212ENST00000498463 UBL4AP11441 157 aa9.05□□□□□ -0.96
SNX13-212ENST00000498463 ADORA2AP29274 412 aa9.05□□□□□ -0.96
SNX13-212ENST00000498463 RPS3AP61247 264 aaKnown RBP9.05□□□□□ -0.96
SNX13-212ENST00000498463 TBL3Q12788 808 aaKnown RBP9.05□□□□□ -0.96
SNX13-212ENST00000498463 PTP4A2Q12974 167 aa9.05□□□□□ -0.96
SNX13-212ENST00000498463 DCTN2Q13561 401 aaKnown RBP9.05□□□□□ -0.96
SNX13-212ENST00000498463 CLCA4Q14CN2 919 aa9.05□□□□□ -0.96
SNX13-212ENST00000498463 ACOX1Q15067 660 aa9.05□□□□□ -0.96
SNX13-212ENST00000498463 TAF11Q15544 211 aa9.05□□□□□ -0.96
SNX13-212ENST00000498463 KLHL24Q6TFL4 600 aa9.05□□□□□ -0.96
SNX13-212ENST00000498463 SZRD1Q7Z422 152 aa9.05□□□□□ -0.96
SNX13-212ENST00000498463 TTC39CQ8N584 583 aa9.05□□□□□ -0.96
SNX13-212ENST00000498463 C11orf44Q8N8P7 122 aa9.05□□□□□ -0.96
SNX13-212ENST00000498463 FAM120BQ96EK7 910 aaKnown RBP9.05□□□□□ -0.96
SNX13-212ENST00000498463 REXO5Q96IC2 774 aaKnown RBP9.05□□□□□ -0.96
SNX13-212ENST00000498463 TAOK3Q9H2K8 898 aa9.05□□□□□ -0.96
SNX13-212ENST00000498463 MRGBPQ9NV56 204 aa9.05□□□□□ -0.96
SNX13-212ENST00000498463 PCDHB7Q9Y5E2 793 aa9.05□□□□□ -0.96
SNX13-212ENST00000498463 SNX14Q9Y5W7 946 aa9.05□□□□□ -0.96
SNX13-212ENST00000498463 RPGRIP1LQ68CZ1 1315 aa9.05□□□□□ -0.96
SNX13-212ENST00000498463 MASP2O00187 686 aa9.04□□□□□ -0.96
SNX13-212ENST00000498463 CSH1P0DML2 217 aa9.04□□□□□ -0.96
SNX13-212ENST00000498463 CSH2P0DML3 217 aa9.04□□□□□ -0.96
SNX13-212ENST00000498463 DRD1P21728 446 aa9.04□□□□□ -0.96
SNX13-212ENST00000498463 EPHA3P29320 983 aa9.04□□□□□ -0.96
SNX13-212ENST00000498463 THBS4P35443 961 aa9.04□□□□□ -0.96
SNX13-212ENST00000498463 PNPLA4P41247 253 aa9.04□□□□□ -0.96
SNX13-212ENST00000498463 GSTM5P46439 218 aa9.04□□□□□ -0.96
SNX13-212ENST00000498463 IFI35P80217 286 aaPredicted RBP9.04□□□□□ -0.96
SNX13-212ENST00000498463 CHAF1BQ13112 559 aa9.04□□□□□ -0.96
SNX13-212ENST00000498463 PLCB4Q15147 1175 aa9.04□□□□□ -0.96
SNX13-212ENST00000498463 TBC1D10BQ4KMP7 808 aaPredicted RBP9.04□□□□□ -0.96
SNX13-212ENST00000498463 DENND1BQ6P3S1 775 aa9.04□□□□□ -0.96
SNX13-212ENST00000498463 CBLL1Q75N03 491 aa9.04□□□□□ -0.96
SNX13-212ENST00000498463 TMPRSS9Q7Z410 1059 aa9.04□□□□□ -0.96
SNX13-212ENST00000498463 SYT12Q8IV01 421 aa9.04□□□□□ -0.96
SNX13-212ENST00000498463 ETNPPLQ8TBG4 499 aa9.04□□□□□ -0.96
SNX13-212ENST00000498463 PIGSQ96S52 555 aa9.04□□□□□ -0.96
SNX13-212ENST00000498463 HAPLN3Q96S86 360 aa9.04□□□□□ -0.96
SNX13-212ENST00000498463 YME1L1Q96TA2 773 aa9.04□□□□□ -0.96
SNX13-212ENST00000498463 DPYSL5Q9BPU6 564 aa9.04□□□□□ -0.96
SNX13-212ENST00000498463 REXO4Q9GZR2 422 aaKnown RBP9.04□□□□□ -0.96
SNX13-212ENST00000498463 C12orf65Q9H3J6 166 aaKnown RBP9.04□□□□□ -0.96
SNX13-212ENST00000498463 MUC13Q9H3R2 512 aa9.04□□□□□ -0.96
SNX13-212ENST00000498463 VEZTQ9HBM0 779 aa9.04□□□□□ -0.96
SNX13-212ENST00000498463 TULP3O75386 442 aa9.03□□□□□ -0.96
SNX13-212ENST00000498463 TSPAN9O75954 239 aa9.03□□□□□ -0.96
SNX13-212ENST00000498463 WEE2P0C1S8 567 aa9.03□□□□□ -0.96
SNX13-212ENST00000498463 KCNA2P16389 499 aa9.03□□□□□ -0.96
SNX13-212ENST00000498463 IL11P20809 199 aa9.03□□□□□ -0.96
SNX13-212ENST00000498463 GLDCP23378 1020 aa9.03□□□□□ -0.96
SNX13-212ENST00000498463 PBX1P40424 430 aa9.03□□□□□ -0.96
SNX13-212ENST00000498463 PDE6CP51160 858 aa9.03□□□□□ -0.96
SNX13-212ENST00000498463 SNX16P57768 344 aa9.03□□□□□ -0.96
SNX13-212ENST00000498463 CALD1Q05682 793 aaKnown RBP9.03□□□□□ -0.96
SNX13-212ENST00000498463 CDC16Q13042 620 aa9.03□□□□□ -0.96
SNX13-212ENST00000498463 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.03□□□□□ -0.96
SNX13-212ENST00000498463 KRT27Q7Z3Y8 459 aa9.03□□□□□ -0.96
SNX13-212ENST00000498463 SRBD1Q8N5C6 995 aaKnown RBP9.03□□□□□ -0.96
SNX13-212ENST00000498463 PTGR2Q8N8N7 351 aaPredicted RBP9.03□□□□□ -0.96
SNX13-212ENST00000498463 ZCCHC10Q8TBK6 192 aa9.03□□□□□ -0.96
SNX13-212ENST00000498463 SSH3Q8TE77 659 aa9.03□□□□□ -0.96
SNX13-212ENST00000498463 PPP1R10Q96QC0 940 aaKnown RBP9.03□□□□□ -0.96
SNX13-212ENST00000498463 NEU1Q99519 415 aa9.03□□□□□ -0.96
SNX13-212ENST00000498463 EIF3CQ99613 913 aaKnown RBP9.03□□□□□ -0.96
SNX13-212ENST00000498463 INTS2Q9H0H0 1204 aaKnown RBP9.03□□□□□ -0.96
SNX13-212ENST00000498463 TTYH1Q9H313 450 aaPredicted RBP9.03□□□□□ -0.96
SNX13-212ENST00000498463 SERHL2Q9H4I8 314 aa9.03□□□□□ -0.96
SNX13-212ENST00000498463 CEP72Q9P209 647 aa9.03□□□□□ -0.96
SNX13-212ENST00000498463 SLC25A10Q9UBX3 287 aaPredicted RBP9.03□□□□□ -0.96
SNX13-212ENST00000498463 STK17AQ9UEE5 414 aa9.03□□□□□ -0.96
SNX13-212ENST00000498463 ZNF215Q9UL58 517 aaPredicted RBP9.03□□□□□ -0.96
SNX13-212ENST00000498463 TMEM5Q9Y2B1 443 aa9.03□□□□□ -0.96
SNX13-212ENST00000498463 SSX2IPQ9Y2D8 614 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms