RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 ERV3-1Q14264 604 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 RSPO4Q2I0M5 234 aaPredicted RBP2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 GAGE13Q4V321 117 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 CCDC157Q569K6 752 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 SLC45A4Q5BKX6 768 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 FAM47AQ5JRC9 791 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 ZMYM1Q5SVZ6 1142 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 TMTC4Q5T4D3 741 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 LMBRD2Q68DH5 695 aaPredicted RBP2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 SULT6B1Q6IMI4 303 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 MFSD5Q6N075 450 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 MRNIPQ6NTE8 343 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 SLC23A3Q6PIS1 610 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 RPTNQ6XPR3 784 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 Q6ZNB5 142 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 GADL1Q6ZQY3 521 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 TMTC3Q6ZXV5 915 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 ZNF365Q70YC5 407 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 ARMC9Q7Z3E5 817 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 RSPH3Q86UC2 560 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 CD163Q86VB7 1156 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 YAF2Q8IY57 180 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 FBXL6Q8N531 539 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 LINC00482Q8N8I6 264 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 CNBD1Q8NA66 436 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 ANKRD52Q8NB46 1076 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 DNERQ8NFT8 737 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 TDRD7Q8NHU6 1098 aaKnown RBP2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 CXorf38Q8TB03 319 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 IPO4Q8TEX9 1081 aaKnown RBP2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 NELL1Q92832 810 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 SCAMP4Q969E2 229 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 SPSB4Q96A44 273 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 BORCS6Q96GS4 357 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 KCNC2Q96PR1 638 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 PPP1R9BQ96SB3 815 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 NUDT16L1Q9BRJ7 211 aaKnown RBP2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 MESP1Q9BRJ9 268 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 NUDT22Q9BRQ3 303 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 RTKNQ9BST9 563 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 FAM167BQ9BTA0 163 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 SPATA5L1Q9BVQ7 753 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 CPEB1Q9BZB8 566 aaKnown RBP2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 C11orf54Q9H0W9 315 aaPredicted RBP2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 ELAC1Q9H777 363 aaKnown RBP2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 ZBTB26Q9HCK0 441 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 SH3GLB2Q9NR46 395 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 SMC4Q9NTJ3 1288 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 SACM1LQ9NTJ5 587 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 GJB4Q9NTQ9 266 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 TMEM140Q9NV12 185 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 PLA2G3Q9NZ20 509 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 MOCS1Q9NZB8 636 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 ZNF212Q9UDV6 495 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 YBX2Q9Y2T7 364 aaKnown RBP2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 CTDP1Q9Y5B0 961 aaPredicted RBP2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 HS3ST4Q9Y661 456 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 CYP46A1Q9Y6A2 500 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 LAMA5O15230 3695 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 LAMB1P07942 1786 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 A0A1W2PPH5 198 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 A0A1W2PQ27 194 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 A0A1W2PQ64 194 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 A0A1W2PQC6 194 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 A0A1W2PQD8 194 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 ZC3H12DA2A288 527 aaKnown RBP2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 TMEM221A6NGB7 291 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 FAM90A20PA6NIJ5 464 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 YDJCA8MPS7 323 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 M0R296 226 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 WNT10BO00744 389 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 ASNA1O43681 348 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 TSPAN3O60637 253 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 WFS1O76024 890 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 ACTL6BO94805 426 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 CSPG5O95196 566 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 TNFRSF6BO95407 300 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 MLYCDO95822 493 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 CD1AP06126 327 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 C8BP07358 591 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 ADRB2P07550 413 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 MTHFD1P11586 935 aaKnown RBP2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 MYCLP12524 364 aaPredicted RBP2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 XRCC6P12956 609 aaKnown RBP eCLIP2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 ATP1A3P13637 1013 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 GLULP15104 373 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 ALOX12P18054 663 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 PTMSP20962 102 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 ACVR2AP27037 513 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 AVPR2P30518 371 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 ZEB1P37275 1124 aaPredicted RBP2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 STAT1P42224 750 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 KIR2DL3P43628 341 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 CCT4P50991 539 aaKnown RBP2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 DRG2P55039 364 aaKnown RBP2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 VCPP55072 806 aaKnown RBP2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 MXRA7P84157 204 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 PRR5P85299 388 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 PRKCZQ05513 592 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 EXOSC9Q06265 439 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms