RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 KLF10Q13118 480 aa5.55□□□□□ -1.52
VPS36-206ENST00000497149 FHL2Q14192 279 aa5.55□□□□□ -1.52
VPS36-206ENST00000497149 KCNJ12Q14500 433 aa5.55□□□□□ -1.52
VPS36-206ENST00000497149 AASDHQ4L235 1098 aaPredicted RBP5.55□□□□□ -1.52
VPS36-206ENST00000497149 AARS2Q5JTZ9 985 aaKnown RBP5.55□□□□□ -1.52
VPS36-206ENST00000497149 PCID2Q5JVF3 399 aa5.55□□□□□ -1.52
VPS36-206ENST00000497149 L1TD1Q5T7N2 865 aaKnown RBP5.55□□□□□ -1.52
VPS36-206ENST00000497149 TANGO2Q6ICL3 276 aa5.55□□□□□ -1.52
VPS36-206ENST00000497149 LIN54Q6MZP7 749 aa5.55□□□□□ -1.52
VPS36-206ENST00000497149 RINT1Q6NUQ1 792 aa5.55□□□□□ -1.52
VPS36-206ENST00000497149 TRAPPC12Q8WVT3 735 aa5.55□□□□□ -1.52
VPS36-206ENST00000497149 THAP7Q9BT49 309 aaPredicted RBP5.55□□□□□ -1.52
VPS36-206ENST00000497149 TMEM120AQ9BXJ8 343 aa5.55□□□□□ -1.52
VPS36-206ENST00000497149 CHMP4AQ9BY43 222 aa5.55□□□□□ -1.52
VPS36-206ENST00000497149 LPAR3Q9UBY5 353 aa5.55□□□□□ -1.52
VPS36-206ENST00000497149 ASAP1Q9ULH1 1129 aa5.55□□□□□ -1.52
VPS36-206ENST00000497149 TMPRSS11DO60235 418 aa5.54□□□□□ -1.52
VPS36-206ENST00000497149 GYS1P13807 737 aa5.54□□□□□ -1.52
VPS36-206ENST00000497149 DRD1P21728 446 aa5.54□□□□□ -1.52
VPS36-206ENST00000497149 ADRA1DP25100 572 aa5.54□□□□□ -1.52
VPS36-206ENST00000497149 DGKQP52824 942 aa5.54□□□□□ -1.52
VPS36-206ENST00000497149 PNLIPRP1P54315 467 aa5.54□□□□□ -1.52
VPS36-206ENST00000497149 PSG6Q00889 435 aa5.54□□□□□ -1.52
VPS36-206ENST00000497149 DPTQ07507 201 aa5.54□□□□□ -1.52
VPS36-206ENST00000497149 CSHL1Q14406 222 aa5.54□□□□□ -1.52
VPS36-206ENST00000497149 FAM90A2PQ658T7 463 aa5.54□□□□□ -1.52
VPS36-206ENST00000497149 SULT6B1Q6IMI4 303 aa5.54□□□□□ -1.52
VPS36-206ENST00000497149 JMJD6Q6NYC1 403 aaPredicted RBP5.54□□□□□ -1.52
VPS36-206ENST00000497149 MSANTD2Q6P1R3 559 aa5.54□□□□□ -1.52
VPS36-206ENST00000497149 KLHL17Q6TDP4 642 aa5.54□□□□□ -1.52
VPS36-206ENST00000497149 PIK3AP1Q6ZUJ8 805 aa5.54□□□□□ -1.52
VPS36-206ENST00000497149 GRASPQ7Z6J2 395 aaPredicted RBP5.54□□□□□ -1.52
VPS36-206ENST00000497149 CLASRPQ8N2M8 674 aaKnown RBP5.54□□□□□ -1.52
VPS36-206ENST00000497149 NGDNQ8NEJ9 315 aaKnown RBP5.54□□□□□ -1.52
VPS36-206ENST00000497149 CAGE1Q8TC20 777 aa5.54□□□□□ -1.52
VPS36-206ENST00000497149 OTUD7AQ8TE49 926 aaPredicted RBP5.54□□□□□ -1.52
VPS36-206ENST00000497149 WDR60Q8WVS4 1066 aa5.54□□□□□ -1.52
VPS36-206ENST00000497149 OVCA2Q8WZ82 227 aa5.54□□□□□ -1.52
VPS36-206ENST00000497149 TBC1D20Q96BZ9 403 aa5.54□□□□□ -1.52
VPS36-206ENST00000497149 RXFP3Q9NSD7 469 aa5.54□□□□□ -1.52
VPS36-206ENST00000497149 ING1Q9UK53 422 aaPredicted RBP5.54□□□□□ -1.52
VPS36-206ENST00000497149 PCDHGB3Q9Y5G1 929 aa5.54□□□□□ -1.52
VPS36-206ENST00000497149 ENTPD2Q9Y5L3 495 aa5.54□□□□□ -1.52
VPS36-206ENST00000497149 IPO5O00410 1097 aaKnown RBP5.53□□□□□ -1.52
VPS36-206ENST00000497149 CYR61O00622 381 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 CTIFO43310 598 aaKnown RBP5.53□□□□□ -1.52
VPS36-206ENST00000497149 CA12O43570 354 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 ACTL6BO94805 426 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 PDE8BO95263 885 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 DRD4P21917 467 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 GSTM5P46439 218 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 DIO1P49895 249 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 CACNA2D1P54289 1103 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 INHBCP55103 352 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 SEMA3BQ13214 749 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 DNASE1L3Q13609 305 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 PRKG1Q13976 671 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 POSTNQ15063 836 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 ERCC6LQ2NKX8 1250 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 P3H1Q32P28 736 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 FAM153CQ494X1 144 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 ATPAF1Q5TC12 328 aaPredicted RBP5.53□□□□□ -1.52
VPS36-206ENST00000497149 DENND2CQ68D51 928 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 CCDC144NLQ6NUI1 221 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 PCSK4Q6UW60 755 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 OLFML1Q6UWY5 402 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 LDHAL6AQ6ZMR3 332 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 RASAL3Q86YV0 1011 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 CCDC117Q8IWD4 279 aaPredicted RBP5.53□□□□□ -1.52
VPS36-206ENST00000497149 SFTPA1Q8IWL2 248 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 GALNT15Q8N3T1 639 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.53□□□□□ -1.52
VPS36-206ENST00000497149 PNPLA1Q8N8W4 532 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 MYRIPQ8NFW9 859 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 GPR150Q8NGU9 434 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 TBC1D5Q92609 795 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 TIMP4Q99727 224 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 RTKNQ9BST9 563 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 ISCA1Q9BUE6 129 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 SCAND2PQ9GZW5 306 aaPredicted RBP5.53□□□□□ -1.52
VPS36-206ENST00000497149 PCED1AQ9H1Q7 454 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 PABPC3Q9H361 631 aaKnown RBP5.53□□□□□ -1.52
VPS36-206ENST00000497149 MLXIPQ9HAP2 919 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 SNX15Q9NRS6 342 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 SLC17A6Q9P2U8 582 aa5.53□□□□□ -1.52
VPS36-206ENST00000497149 ZNF213O14771 459 aa5.52□□□□□ -1.53
VPS36-206ENST00000497149 CER1O95813 267 aa5.52□□□□□ -1.53
VPS36-206ENST00000497149 DHRS4L1P0CG22 281 aa5.52□□□□□ -1.53
VPS36-206ENST00000497149 FPR3P25089 353 aa5.52□□□□□ -1.53
VPS36-206ENST00000497149 AP2B1P63010 937 aa5.52□□□□□ -1.53
VPS36-206ENST00000497149 LMAN2Q12907 356 aa5.52□□□□□ -1.53
VPS36-206ENST00000497149 BFSP2Q13515 415 aa5.52□□□□□ -1.53
VPS36-206ENST00000497149 TRIM60Q495X7 471 aa5.52□□□□□ -1.53
VPS36-206ENST00000497149 RNASE12Q5GAN4 147 aaKnown RBP5.52□□□□□ -1.53
VPS36-206ENST00000497149 TSTD2Q5T7W7 516 aa5.52□□□□□ -1.53
VPS36-206ENST00000497149 P3H2Q8IVL5 708 aa5.52□□□□□ -1.53
VPS36-206ENST00000497149 SLC44A2Q8IWA5 706 aaPredicted RBP5.52□□□□□ -1.53
VPS36-206ENST00000497149 SIMC1Q8NDZ2 872 aa5.52□□□□□ -1.53
VPS36-206ENST00000497149 SCAMP5Q8TAC9 235 aa5.52□□□□□ -1.53
VPS36-206ENST00000497149 PRR11Q96HE9 360 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms