RNA–Protein interactions for RNA: ENST00000497044.5

SHTN1-206, Transcript of shootin 1, humanhuman

TSL 2

Gene SHTN1, Length 3,647 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-206ENST00000497044 NEMP1O14524 444 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 MAP2K7O14733 419 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 CAPN9O14815 690 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 PI15O43692 258 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 LEFTY1O75610 366 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 PRNPP04156 253 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 RBP3P10745 1247 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 RIPPLY3P57055 190 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 TBX2Q13207 712 aaPredicted RBP3.34□□□□□ -1.87
SHTN1-206ENST00000497044 NPY5RQ15761 445 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 CALCRLQ16602 461 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 INF2Q27J81 1249 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 MAP9Q49MG5 647 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 TMEM196Q5HYL7 178 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 SPRED2Q7Z698 418 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 MTERF4Q7Z6M4 381 aaKnown RBP3.34□□□□□ -1.87
SHTN1-206ENST00000497044 REXO1L1PQ8IX06 675 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 DIS3L2Q8IYB7 885 aaKnown RBP3.34□□□□□ -1.87
SHTN1-206ENST00000497044 GALNT15Q8N3T1 639 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 SVIPQ8NHG7 77 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 ADAM2Q99965 735 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 FAM86C1Q9NVL1 165 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 FBXL7Q9UJT9 491 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 DERAQ9Y315 318 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 SF3B1O75533 1304 aaKnown RBP eCLIP3.34□□□□□ -1.87
SHTN1-206ENST00000497044 SHOX2O60902 331 aaPredicted RBP3.34□□□□□ -1.87
SHTN1-206ENST00000497044 ATP9AO75110 1047 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 GJB3O75712 270 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 RASGRP1O95267 797 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 PDGFBP01127 241 aaPredicted RBP3.34□□□□□ -1.87
SHTN1-206ENST00000497044 ALDH2P05091 517 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 OR52Z1P0C646 297 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 GHRP10912 638 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 PTPN2P17706 415 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 TYMPP19971 482 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 TNFRSF4P43489 277 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 MTNR1BP49286 362 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 NEK2P51955 445 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 PRKCEQ02156 737 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 CSTF1Q05048 431 aaKnown RBP3.34□□□□□ -1.87
SHTN1-206ENST00000497044 TERF2Q15554 542 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 DCAF4L1Q3SXM0 396 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 NT5DC1Q5TFE4 455 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 PMS2CLQ68D20 193 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 SWSAP1Q6NVH7 229 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 LETMD1Q6P1Q0 360 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 SLCO6A1Q86UG4 719 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 SMYD4Q8IYR2 804 aaPredicted RBP3.34□□□□□ -1.87
SHTN1-206ENST00000497044 BTN2A2Q8WVV5 523 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 SLC7A3Q8WY07 619 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 PMM1Q92871 262 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 CCDC43Q96MW1 224 aaKnown RBP3.34□□□□□ -1.87
SHTN1-206ENST00000497044 NACC1Q96RE7 527 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 CCSER1Q9C0I3 900 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 MAN1C1Q9NR34 630 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 TBC1D13Q9NVG8 400 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 GABBR1Q9UBS5 961 aa3.34□□□□□ -1.87
SHTN1-206ENST00000497044 BAZ2BQ9UIF8 2168 aaKnown RBP3.34□□□□□ -1.87
SHTN1-206ENST00000497044 HIDE1A8MVS5 230 aa3.34□□□□□ -1.88
SHTN1-206ENST00000497044 BRINP1O60477 761 aa3.34□□□□□ -1.88
SHTN1-206ENST00000497044 CCNT1O60563 726 aaKnown RBP3.34□□□□□ -1.88
SHTN1-206ENST00000497044 CLEC3AO75596 197 aa3.34□□□□□ -1.88
SHTN1-206ENST00000497044 CLSTN1O94985 981 aa3.34□□□□□ -1.88
SHTN1-206ENST00000497044 CTDNEP1O95476 244 aa3.34□□□□□ -1.88
SHTN1-206ENST00000497044 CCNE2O96020 404 aa3.34□□□□□ -1.88
SHTN1-206ENST00000497044 CPA1P15085 419 aa3.34□□□□□ -1.88
SHTN1-206ENST00000497044 KLRC1P26715 233 aa3.34□□□□□ -1.88
SHTN1-206ENST00000497044 AARSP49588 968 aaKnown RBP eCLIP3.34□□□□□ -1.88
SHTN1-206ENST00000497044 ZNF460Q14592 562 aa3.34□□□□□ -1.88
SHTN1-206ENST00000497044 CPSF6Q16630 551 aaKnown RBP eCLIP3.34□□□□□ -1.88
SHTN1-206ENST00000497044 NKPD1Q17RQ9 610 aa3.34□□□□□ -1.88
SHTN1-206ENST00000497044 NKAPLQ5M9Q1 402 aa3.34□□□□□ -1.88
SHTN1-206ENST00000497044 UBXN11Q5T124 520 aa3.34□□□□□ -1.88
SHTN1-206ENST00000497044 TMEM63BQ5T3F8 832 aa3.34□□□□□ -1.88
SHTN1-206ENST00000497044 TRMT11Q7Z4G4 463 aaKnown RBP3.34□□□□□ -1.88
SHTN1-206ENST00000497044 TMC3Q7Z5M5 1100 aa3.34□□□□□ -1.88
SHTN1-206ENST00000497044 FMNL3Q8IVF7 1028 aa3.34□□□□□ -1.88
SHTN1-206ENST00000497044 CCDC60Q8IWA6 550 aaPredicted RBP3.34□□□□□ -1.88
SHTN1-206ENST00000497044 AHI1Q8N157 1196 aa3.34□□□□□ -1.88
SHTN1-206ENST00000497044 VPS52Q8N1B4 723 aa3.34□□□□□ -1.88
SHTN1-206ENST00000497044 DNAJB3Q8WWF6 145 aa3.34□□□□□ -1.88
SHTN1-206ENST00000497044 WFDC12Q8WWY7 111 aa3.34□□□□□ -1.88
SHTN1-206ENST00000497044 ZCCHC14Q8WYQ9 949 aaKnown RBP3.34□□□□□ -1.88
SHTN1-206ENST00000497044 HOXB13Q92826 284 aaPredicted RBP3.34□□□□□ -1.88
SHTN1-206ENST00000497044 TRMT2BQ96GJ1 504 aaKnown RBP3.34□□□□□ -1.88
SHTN1-206ENST00000497044 CNOT6LQ96LI5 555 aaKnown RBP3.34□□□□□ -1.88
SHTN1-206ENST00000497044 TBATAQ96M53 351 aa3.34□□□□□ -1.88
SHTN1-206ENST00000497044 APOL6Q9BWW8 343 aa3.34□□□□□ -1.88
SHTN1-206ENST00000497044 LRRC27Q9C0I9 530 aa3.34□□□□□ -1.88
SHTN1-206ENST00000497044 UNC45AQ9H3U1 944 aa3.34□□□□□ -1.88
SHTN1-206ENST00000497044 ZSCAN16Q9H4T2 348 aaPredicted RBP3.34□□□□□ -1.88
SHTN1-206ENST00000497044 ZNF334Q9HCZ1 680 aaPredicted RBP3.34□□□□□ -1.88
SHTN1-206ENST00000497044 TMEM9BQ9NQ34 198 aa3.34□□□□□ -1.88
SHTN1-206ENST00000497044 ACSL6Q9UKU0 697 aa3.34□□□□□ -1.88
SHTN1-206ENST00000497044 VAV3Q9UKW4 847 aa3.34□□□□□ -1.88
SHTN1-206ENST00000497044 PCDHA12Q9UN75 941 aa3.34□□□□□ -1.88
SHTN1-206ENST00000497044 SMC3Q9UQE7 1217 aa3.34□□□□□ -1.88
SHTN1-206ENST00000497044 GOLGB1Q14789 3259 aaKnown RBP3.34□□□□□ -1.88
SHTN1-206ENST00000497044 UTRNP46939 3433 aa3.33□□□□□ -1.88
SHTN1-206ENST00000497044 A6NNZ2 444 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms