RNA–Protein interactions for RNA: ENST00000496969.1

SF1-219, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-219ENST00000496969 CNGB3Q9NQW8 809 aa8.83□□□□□ -1
SF1-219ENST00000496969 DNAJC17Q9NVM6 304 aaKnown RBP8.83□□□□□ -1
SF1-219ENST00000496969 MARCH2Q9P0N8 246 aa8.83□□□□□ -1
SF1-219ENST00000496969 BCCIPQ9P287 314 aaKnown RBP eCLIP8.83□□□□□ -1
SF1-219ENST00000496969 MMP17Q9ULZ9 603 aa8.83□□□□□ -1
SF1-219ENST00000496969 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.83□□□□□ -1
SF1-219ENST00000496969 SLC12A8A0AV02 714 aa8.82□□□□□ -1
SF1-219ENST00000496969 K7EQS6 105 aa8.82□□□□□ -1
SF1-219ENST00000496969 TULP2O00295 520 aa8.82□□□□□ -1
SF1-219ENST00000496969 ZBTB24O43167 697 aaPredicted RBP8.82□□□□□ -1
SF1-219ENST00000496969 HRO43593 1189 aa8.82□□□□□ -1
SF1-219ENST00000496969 TULP3O75386 442 aa8.82□□□□□ -1
SF1-219ENST00000496969 STC2O76061 302 aa8.82□□□□□ -1
SF1-219ENST00000496969 FBXO21O94952 628 aa8.82□□□□□ -1
SF1-219ENST00000496969 KLF8O95600 359 aaPredicted RBP8.82□□□□□ -1
SF1-219ENST00000496969 RETP07949 1114 aa8.82□□□□□ -1
SF1-219ENST00000496969 TYRP14679 529 aa8.82□□□□□ -1
SF1-219ENST00000496969 SDHBP21912 280 aa8.82□□□□□ -1
SF1-219ENST00000496969 CORO1AP31146 461 aaKnown RBP8.82□□□□□ -1
SF1-219ENST00000496969 TIE1P35590 1138 aa8.82□□□□□ -1
SF1-219ENST00000496969 CHKAP35790 457 aa8.82□□□□□ -1
SF1-219ENST00000496969 TNFRSF4P43489 277 aa8.82□□□□□ -1
SF1-219ENST00000496969 ID4P47928 161 aa8.82□□□□□ -1
SF1-219ENST00000496969 SLC6A11P48066 632 aa8.82□□□□□ -1
SF1-219ENST00000496969 PXNP49023 591 aaPredicted RBP8.82□□□□□ -1
SF1-219ENST00000496969 HARS2P49590 506 aaKnown RBP8.82□□□□□ -1
SF1-219ENST00000496969 DGKEP52429 567 aa8.82□□□□□ -1
SF1-219ENST00000496969 SRSF5Q13243 272 aaKnown RBP8.82□□□□□ -1
SF1-219ENST00000496969 CNGA2Q16280 664 aa8.82□□□□□ -1
SF1-219ENST00000496969 MAN2A1Q16706 1144 aa8.82□□□□□ -1
SF1-219ENST00000496969 EXOC3L4Q17RC7 722 aa8.82□□□□□ -1
SF1-219ENST00000496969 GAB4Q2WGN9 574 aa8.82□□□□□ -1
SF1-219ENST00000496969 PM20D1Q6GTS8 502 aa8.82□□□□□ -1
SF1-219ENST00000496969 SDE2Q6IQ49 451 aa8.82□□□□□ -1
SF1-219ENST00000496969 GBP6Q6ZN66 633 aa8.82□□□□□ -1
SF1-219ENST00000496969 CACNA2D4Q7Z3S7 1137 aa8.82□□□□□ -1
SF1-219ENST00000496969 TMEM25Q86YD3 366 aa8.82□□□□□ -1
SF1-219ENST00000496969 DCLK2Q8N568 766 aa8.82□□□□□ -1
SF1-219ENST00000496969 CCDC33Q8N5R6 958 aa8.82□□□□□ -1
SF1-219ENST00000496969 ALLCQ8N6M5 410 aa8.82□□□□□ -1
SF1-219ENST00000496969 TERB1Q8NA31 727 aa8.82□□□□□ -1
SF1-219ENST00000496969 TXNDC5Q8NBS9 432 aaKnown RBP8.82□□□□□ -1
SF1-219ENST00000496969 KCNV2Q8TDN2 545 aa8.82□□□□□ -1
SF1-219ENST00000496969 IRGQQ8WZA9 623 aa8.82□□□□□ -1
SF1-219ENST00000496969 EZH1Q92800 747 aaPredicted RBP8.82□□□□□ -1
SF1-219ENST00000496969 KAT5Q92993 513 aa8.82□□□□□ -1
SF1-219ENST00000496969 WBP2Q969T9 261 aa8.82□□□□□ -1
SF1-219ENST00000496969 SPACA7Q96KW9 195 aa8.82□□□□□ -1
SF1-219ENST00000496969 HSFY1Q96LI6 401 aa8.82□□□□□ -1
SF1-219ENST00000496969 TRIM62Q9BVG3 475 aa8.82□□□□□ -1
SF1-219ENST00000496969 UBE2TQ9NPD8 197 aaPredicted RBP8.82□□□□□ -1
SF1-219ENST00000496969 ABCC13Q9NSE7 274 aa8.82□□□□□ -1
SF1-219ENST00000496969 C2orf42Q9NWW7 574 aa8.82□□□□□ -1
SF1-219ENST00000496969 MARK1Q9P0L2 795 aa8.82□□□□□ -1
SF1-219ENST00000496969 APEX2Q9UBZ4 518 aa8.82□□□□□ -1
SF1-219ENST00000496969 GTPBP10A4D1E9 387 aaKnown RBP8.81□□□□□ -1
SF1-219ENST00000496969 PES1O00541 588 aaKnown RBP8.81□□□□□ -1
SF1-219ENST00000496969 SART1O43290 800 aaKnown RBP8.81□□□□□ -1
SF1-219ENST00000496969 THAP12O43422 761 aa8.81□□□□□ -1
SF1-219ENST00000496969 CACNG3O60359 315 aa8.81□□□□□ -1
SF1-219ENST00000496969 FOXD2O60548 495 aaPredicted RBP8.81□□□□□ -1
SF1-219ENST00000496969 LRP3O75074 770 aa8.81□□□□□ -1
SF1-219ENST00000496969 RHOBTB1O94844 696 aa8.81□□□□□ -1
SF1-219ENST00000496969 TPM2P07951 284 aa8.81□□□□□ -1
SF1-219ENST00000496969 PRKCSHP14314 528 aaPredicted RBP8.81□□□□□ -1
SF1-219ENST00000496969 ERCC5P28715 1186 aaPredicted RBP8.81□□□□□ -1
SF1-219ENST00000496969 GNA15P30679 374 aa8.81□□□□□ -1
SF1-219ENST00000496969 GBP1P32455 592 aa8.81□□□□□ -1
SF1-219ENST00000496969 USP8P40818 1118 aa8.81□□□□□ -1
SF1-219ENST00000496969 ACADSBP45954 432 aa8.81□□□□□ -1
SF1-219ENST00000496969 DGKGP49619 791 aa8.81□□□□□ -1
SF1-219ENST00000496969 RGS7P49802 495 aa8.81□□□□□ -1
SF1-219ENST00000496969 ZNF132P52740 706 aa8.81□□□□□ -1
SF1-219ENST00000496969 DAOAP59103 153 aa8.81□□□□□ -1
SF1-219ENST00000496969 ZNF445P59923 1031 aa8.81□□□□□ -1
SF1-219ENST00000496969 SPEM2Q0P670 501 aa8.81□□□□□ -1
SF1-219ENST00000496969 E2F5Q15329 346 aa8.81□□□□□ -1
SF1-219ENST00000496969 ELF2Q15723 593 aa8.81□□□□□ -1
SF1-219ENST00000496969 CRY1Q16526 586 aa8.81□□□□□ -1
SF1-219ENST00000496969 ARHGAP44Q17R89 818 aa8.81□□□□□ -1
SF1-219ENST00000496969 DPCR1Q3MIW9 517 aa8.81□□□□□ -1
SF1-219ENST00000496969 USP39Q53GS9 565 aaKnown RBP8.81□□□□□ -1
SF1-219ENST00000496969 ANO7Q6IWH7 933 aa8.81□□□□□ -1
SF1-219ENST00000496969 TRIM65Q6PJ69 517 aa8.81□□□□□ -1
SF1-219ENST00000496969 Q6ZNB5 142 aa8.81□□□□□ -1
SF1-219ENST00000496969 DENND1CQ8IV53 801 aa8.81□□□□□ -1
SF1-219ENST00000496969 FMNL3Q8IVF7 1028 aa8.81□□□□□ -1
SF1-219ENST00000496969 ETFBKMTQ8IXQ9 262 aa8.81□□□□□ -1
SF1-219ENST00000496969 SCML4Q8N228 414 aa8.81□□□□□ -1
SF1-219ENST00000496969 PGBD3Q8N328 593 aa8.81□□□□□ -1
SF1-219ENST00000496969 FAM160A2Q8N612 972 aaPredicted RBP8.81□□□□□ -1
SF1-219ENST00000496969 ZNF513Q8N8E2 541 aaPredicted RBP8.81□□□□□ -1
SF1-219ENST00000496969 LMO3Q8TAP4 145 aa8.81□□□□□ -1
SF1-219ENST00000496969 TFAP2BQ92481 460 aa8.81□□□□□ -1
SF1-219ENST00000496969 BHMTQ93088 406 aa8.81□□□□□ -1
SF1-219ENST00000496969 KREMEN1Q96MU8 473 aa8.81□□□□□ -1
SF1-219ENST00000496969 CRACR2AQ9BSW2 395 aa8.81□□□□□ -1
SF1-219ENST00000496969 ST7Q9NRC1 585 aa8.81□□□□□ -1
SF1-219ENST00000496969 EBF1Q9UH73 591 aa8.81□□□□□ -1
SF1-219ENST00000496969 HBS1LQ9Y450 684 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms