RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 ITM2CQ9NQX7 267 aa4.39□□□□□ -1.71
CLK1-214ENST00000496205 TM7SF3Q9NS93 570 aa4.39□□□□□ -1.71
CLK1-214ENST00000496205 ELOVL5Q9NYP7 299 aa4.39□□□□□ -1.71
CLK1-214ENST00000496205 NDRG4Q9ULP0 352 aaKnown RBP4.39□□□□□ -1.71
CLK1-214ENST00000496205 SRGAP2O75044 1071 aa4.38□□□□□ -1.71
CLK1-214ENST00000496205 PIAS2O75928 621 aa4.38□□□□□ -1.71
CLK1-214ENST00000496205 URI1O94763 535 aaPredicted RBP4.38□□□□□ -1.71
CLK1-214ENST00000496205 TTLL1O95922 423 aa4.38□□□□□ -1.71
CLK1-214ENST00000496205 PDHA1P08559 390 aa4.38□□□□□ -1.71
CLK1-214ENST00000496205 ITGA5P08648 1049 aa4.38□□□□□ -1.71
CLK1-214ENST00000496205 NR2F6P10588 404 aa4.38□□□□□ -1.71
CLK1-214ENST00000496205 CYP2D6P10635 497 aa4.38□□□□□ -1.71
CLK1-214ENST00000496205 CYP2C9P11712 490 aa4.38□□□□□ -1.71
CLK1-214ENST00000496205 GYS1P13807 737 aa4.38□□□□□ -1.71
CLK1-214ENST00000496205 TPH1P17752 444 aa4.38□□□□□ -1.71
CLK1-214ENST00000496205 TKTP29401 623 aaKnown RBP4.38□□□□□ -1.71
CLK1-214ENST00000496205 PXNP49023 591 aaPredicted RBP4.38□□□□□ -1.71
CLK1-214ENST00000496205 NDUFV1P49821 464 aa4.38□□□□□ -1.71
CLK1-214ENST00000496205 KRT17Q04695 432 aa4.38□□□□□ -1.71
CLK1-214ENST00000496205 TAF5Q15542 800 aa4.38□□□□□ -1.71
CLK1-214ENST00000496205 PROSER3Q2NL68 480 aa4.38□□□□□ -1.71
CLK1-214ENST00000496205 RBM20Q5T481 1227 aaKnown RBP4.38□□□□□ -1.71
CLK1-214ENST00000496205 ARHGAP40Q5TG30 622 aa4.38□□□□□ -1.71
CLK1-214ENST00000496205 RGS7BPQ6MZT1 257 aaPredicted RBP4.38□□□□□ -1.71
CLK1-214ENST00000496205 CPXCR1Q8N123 301 aa4.38□□□□□ -1.71
CLK1-214ENST00000496205 SPATA3Q8NHX4 192 aa4.38□□□□□ -1.71
CLK1-214ENST00000496205 SNX19Q92543 992 aa4.38□□□□□ -1.71
CLK1-214ENST00000496205 PPP2R3CQ969Q6 453 aa4.38□□□□□ -1.71
CLK1-214ENST00000496205 RILPL2Q969X0 211 aa4.38□□□□□ -1.71
CLK1-214ENST00000496205 GBA2Q9HCG7 927 aaPredicted RBP4.38□□□□□ -1.71
CLK1-214ENST00000496205 NECTIN3Q9NQS3 549 aa4.38□□□□□ -1.71
CLK1-214ENST00000496205 DACT1Q9NYF0 836 aa4.38□□□□□ -1.71
CLK1-214ENST00000496205 VPS51Q9UID3 782 aa4.38□□□□□ -1.71
CLK1-214ENST00000496205 SERTAD3Q9UJW9 196 aa4.38□□□□□ -1.71
CLK1-214ENST00000496205 SHOC2Q9UQ13 582 aa4.38□□□□□ -1.71
CLK1-214ENST00000496205 HPSEQ9Y251 543 aa4.38□□□□□ -1.71
CLK1-214ENST00000496205 TISP43B9A030 160 aa4.37□□□□□ -1.71
CLK1-214ENST00000496205 E7ENX8 843 aa4.37□□□□□ -1.71
CLK1-214ENST00000496205 PPP6CO00743 305 aa4.37□□□□□ -1.71
CLK1-214ENST00000496205 HNRNPDLO14979 420 aaKnown RBP4.37□□□□□ -1.71
CLK1-214ENST00000496205 CD3EAPO15446 510 aaKnown RBP4.37□□□□□ -1.71
CLK1-214ENST00000496205 DHHO43323 396 aa4.37□□□□□ -1.71
CLK1-214ENST00000496205 RASAL1O95294 804 aa4.37□□□□□ -1.71
CLK1-214ENST00000496205 VNN1O95497 513 aa4.37□□□□□ -1.71
CLK1-214ENST00000496205 XRCC6P12956 609 aaKnown RBP eCLIP4.37□□□□□ -1.71
CLK1-214ENST00000496205 CERS1P27544 350 aa4.37□□□□□ -1.71
CLK1-214ENST00000496205 NR4A2P43354 598 aa4.37□□□□□ -1.71
CLK1-214ENST00000496205 NPTX2P47972 431 aa4.37□□□□□ -1.71
CLK1-214ENST00000496205 CCT8P50990 548 aa4.37□□□□□ -1.71
CLK1-214ENST00000496205 NXPH1P58417 271 aa4.37□□□□□ -1.71
CLK1-214ENST00000496205 TAP2Q03519 686 aa4.37□□□□□ -1.71
CLK1-214ENST00000496205 ITIH3Q06033 890 aa4.37□□□□□ -1.71
CLK1-214ENST00000496205 MAPKAPK3Q16644 382 aa4.37□□□□□ -1.71
CLK1-214ENST00000496205 SLC5A9Q2M3M2 681 aa4.37□□□□□ -1.71
CLK1-214ENST00000496205 MGAT5BQ3V5L5 792 aa4.37□□□□□ -1.71
CLK1-214ENST00000496205 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.37□□□□□ -1.71
CLK1-214ENST00000496205 SULT6B1Q6IMI4 303 aa4.37□□□□□ -1.71
CLK1-214ENST00000496205 SPATA5Q8NB90 893 aa4.37□□□□□ -1.71
CLK1-214ENST00000496205 B3GALNT2Q8NCR0 500 aa4.37□□□□□ -1.71
CLK1-214ENST00000496205 ZBTB45Q96K62 511 aaPredicted RBP4.37□□□□□ -1.71
CLK1-214ENST00000496205 SCLT1Q96NL6 688 aa4.37□□□□□ -1.71
CLK1-214ENST00000496205 ISCA1Q9BUE6 129 aa4.37□□□□□ -1.71
CLK1-214ENST00000496205 PTDSS2Q9BVG9 487 aa4.37□□□□□ -1.71
CLK1-214ENST00000496205 FSCN3Q9NQT6 498 aa4.37□□□□□ -1.71
CLK1-214ENST00000496205 LPAR3Q9UBY5 353 aa4.37□□□□□ -1.71
CLK1-214ENST00000496205 NEU2Q9Y3R4 380 aa4.37□□□□□ -1.71
CLK1-214ENST00000496205 SNX14Q9Y5W7 946 aa4.37□□□□□ -1.71
CLK1-214ENST00000496205 H3BNC9 293 aa4.36□□□□□ -1.71
CLK1-214ENST00000496205 DHRS4L1P0CG22 281 aa4.36□□□□□ -1.71
CLK1-214ENST00000496205 ITGALP20701 1170 aa4.36□□□□□ -1.71
CLK1-214ENST00000496205 PPIFP30405 207 aaKnown RBP4.36□□□□□ -1.71
CLK1-214ENST00000496205 LRPAP1P30533 357 aa4.36□□□□□ -1.71
CLK1-214ENST00000496205 PPM1FP49593 454 aaPredicted RBP4.36□□□□□ -1.71
CLK1-214ENST00000496205 FOXO1Q12778 655 aa4.36□□□□□ -1.71
CLK1-214ENST00000496205 TIGD6Q17RP2 521 aa4.36□□□□□ -1.71
CLK1-214ENST00000496205 LY6KQ17RY6 165 aa4.36□□□□□ -1.71
CLK1-214ENST00000496205 INSCQ1MX18 579 aa4.36□□□□□ -1.71
CLK1-214ENST00000496205 ZNF260Q3ZCT1 412 aa4.36□□□□□ -1.71
CLK1-214ENST00000496205 PREPLQ4J6C6 727 aaPredicted RBP4.36□□□□□ -1.71
CLK1-214ENST00000496205 ABLIM2Q6H8Q1 611 aa4.36□□□□□ -1.71
CLK1-214ENST00000496205 LVRNQ6Q4G3 990 aa4.36□□□□□ -1.71
CLK1-214ENST00000496205 LAYNQ6UX15 382 aa4.36□□□□□ -1.71
CLK1-214ENST00000496205 SAMD14Q8IZD0 417 aaPredicted RBP4.36□□□□□ -1.71
CLK1-214ENST00000496205 CCDC150Q8NCX0 1101 aa4.36□□□□□ -1.71
CLK1-214ENST00000496205 TRAPPC12Q8WVT3 735 aa4.36□□□□□ -1.71
CLK1-214ENST00000496205 IPCEF1Q8WWN9 437 aaPredicted RBP4.36□□□□□ -1.71
CLK1-214ENST00000496205 REPS1Q96D71 796 aa4.36□□□□□ -1.71
CLK1-214ENST00000496205 PBKQ96KB5 322 aa4.36□□□□□ -1.71
CLK1-214ENST00000496205 MOGAT1Q96PD6 335 aa4.36□□□□□ -1.71
CLK1-214ENST00000496205 PRPF18Q99633 342 aaKnown RBP4.36□□□□□ -1.71
CLK1-214ENST00000496205 KATNAL1Q9BW62 490 aa4.36□□□□□ -1.71
CLK1-214ENST00000496205 EIF2AQ9BY44 585 aaKnown RBP4.36□□□□□ -1.71
CLK1-214ENST00000496205 TMEM8AQ9HCN3 771 aa4.36□□□□□ -1.71
CLK1-214ENST00000496205 DKK3Q9UBP4 350 aa4.36□□□□□ -1.71
CLK1-214ENST00000496205 DTNAQ9Y4J8 743 aa4.36□□□□□ -1.71
CLK1-214ENST00000496205 A0A0B4J269 797 aa4.35□□□□□ -1.71
CLK1-214ENST00000496205 OR2W5A6NFC9 320 aa4.35□□□□□ -1.71
CLK1-214ENST00000496205 B9A039 149 aa4.35□□□□□ -1.71
CLK1-214ENST00000496205 PPM1DO15297 605 aa4.35□□□□□ -1.71
CLK1-214ENST00000496205 INSIG1O15503 277 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms