RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 SLC25A52Q3SY17 297 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 CCDC14Q49A88 953 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 FAM171BQ6P995 826 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 MFSD7Q6UXD7 560 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 C4orf22Q6V702 233 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 CLEC20AQ6ZU45 233 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 BBS12Q6ZW61 710 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 RTL10Q7L3V2 364 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 RNF168Q8IYW5 571 aaPredicted RBP10.69□□□□□ -0.7
HDAC3-214ENST00000495485 FAM71BQ8TC56 605 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 POF1BQ8WVV4 589 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 C1orf54Q8WWF1 131 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 HSPH1Q92598 858 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 SNF8Q96H20 258 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 HERC2P3Q9BVR0 1158 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 B3GNT5Q9BYG0 378 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 DPH5Q9H2P9 285 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 PRDM12Q9H4Q4 367 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 NSUN3Q9H649 340 aaKnown RBP10.69□□□□□ -0.7
HDAC3-214ENST00000495485 DMAP1Q9NPF5 467 aaPredicted RBP10.69□□□□□ -0.7
HDAC3-214ENST00000495485 KRT82Q9NSB4 513 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 FAM53CQ9NYF3 392 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 TJP2Q9UDY2 1190 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 ASIC3Q9UHC3 531 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 PCSK1NQ9UHG2 260 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 HPCAL4Q9UM19 191 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 REV3LO60673 3130 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 SPTBN5Q9NRC6 3674 aaKnown RBP10.69□□□□□ -0.7
HDAC3-214ENST00000495485 VWA8A3KMH1 1905 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 ATG2AQ2TAZ0 1938 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 CFAP69A5D8W1 941 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 OR6C75A6NL08 312 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 PI4K2BG5E9Z4 385 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 APOC4-APOC2K7ER74 178 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 ATP2C2O75185 946 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 GRAP2O75791 330 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 ARHGEF15O94989 841 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 EFEMP2O95967 443 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 ZBED1O96006 694 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 APOC2P02655 101 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 URODP06132 367 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 ITGAVP06756 1048 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 ATF2P15336 505 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 STIP1P31948 543 aaKnown RBP10.68□□□□□ -0.7
HDAC3-214ENST00000495485 HSPA9P38646 679 aaKnown RBP10.68□□□□□ -0.7
HDAC3-214ENST00000495485 ARL4AP40617 200 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 BRCC3P46736 316 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 AFF1P51825 1210 aaKnown RBP10.68□□□□□ -0.7
HDAC3-214ENST00000495485 CDH6P55285 790 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 FAM193AP78312 1265 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 ATP11AP98196 1134 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 ADIGQ0VDE8 80 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 SNX1Q13596 522 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 CDO1Q16878 200 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 ARL13BQ3SXY8 428 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 FUT10Q6P4F1 479 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 TMC7Q7Z402 723 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 CPNE8Q86YQ8 564 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 C3orf58Q8NDZ4 430 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 CENPIQ92674 756 aaPredicted RBP10.68□□□□□ -0.7
HDAC3-214ENST00000495485 P3H4Q92791 437 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 PCED1BQ96HM7 432 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 FUBP3Q96I24 572 aaKnown RBP eCLIP10.68□□□□□ -0.7
HDAC3-214ENST00000495485 CFAP57Q96MR6 1250 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 GUCD1Q96NT3 240 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 CALN1Q9BXU9 219 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 EMILIN2Q9BXX0 1053 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 ZBP1Q9H171 429 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 CSNK1G1Q9HCP0 422 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 CRTAC1Q9NQ79 661 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 MRPL17Q9NRX2 175 aaKnown RBP10.68□□□□□ -0.7
HDAC3-214ENST00000495485 CHST7Q9NS84 486 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 FNIP2Q9P278 1114 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 RCOR3Q9P2K3 495 aaPredicted RBP10.68□□□□□ -0.7
HDAC3-214ENST00000495485 DNAJB4Q9UDY4 337 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 MAFFQ9ULX9 164 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 NR2E1Q9Y466 385 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 NME7Q9Y5B8 376 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 TIMM13Q9Y5L4 95 aaPredicted RBP10.68□□□□□ -0.7
HDAC3-214ENST00000495485 MTCH2Q9Y6C9 303 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 EYSQ5T1H1 3165 aa10.68□□□□□ -0.7
HDAC3-214ENST00000495485 ESYT3A0FGR9 886 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 MYBPHLA2RUH7 354 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 GOLGA8KD6RF30 607 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 TULP2O00295 520 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 PIK3R2O00459 728 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 CLDN5O00501 218 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 TRIM66O15016 1216 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 MCF2LO15068 1137 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 GRM6O15303 877 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 LIASO43766 372 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 CST8O60676 142 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 ENDOD1O94919 500 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 OAZ2O95190 189 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 KRT14P02533 472 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 LTFP02788 710 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 TGM2P21980 687 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 TKTP29401 623 aaKnown RBP10.67□□□□□ -0.7
HDAC3-214ENST00000495485 FLT3P36888 993 aa10.67□□□□□ -0.7
HDAC3-214ENST00000495485 ADCY8P40145 1251 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms