RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, human

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-208	ENST00000495327	EFEMP1	Q12805	493 aa		13.98	□□□□□ -0.17
RBM28-208	ENST00000495327	PREPL	Q4J6C6	727 aa	Predicted RBP	13.98	□□□□□ -0.17
RBM28-208	ENST00000495327	MIB1	Q86YT6	1006 aa		13.98	□□□□□ -0.17
RBM28-208	ENST00000495327	CAMKK1	Q8N5S9	505 aa		13.98	□□□□□ -0.17
RBM28-208	ENST00000495327	UBA3	Q8TBC4	463 aa		13.98	□□□□□ -0.17
RBM28-208	ENST00000495327	IRGQ	Q8WZA9	623 aa		13.98	□□□□□ -0.17
RBM28-208	ENST00000495327	RUBCN	Q92622	972 aa		13.98	□□□□□ -0.17
RBM28-208	ENST00000495327	SECISBP2L	Q93073	1101 aa	Known RBP	13.98	□□□□□ -0.17
RBM28-208	ENST00000495327	HSFY1	Q96LI6	401 aa		13.98	□□□□□ -0.17
RBM28-208	ENST00000495327	CRACR2A	Q9BSW2	395 aa		13.98	□□□□□ -0.17
RBM28-208	ENST00000495327	UBE2T	Q9NPD8	197 aa	Predicted RBP	13.98	□□□□□ -0.17
RBM28-208	ENST00000495327	SLC8A2	Q9UPR5	921 aa		13.98	□□□□□ -0.17
RBM28-208	ENST00000495327	ZNF510	Q9Y2H8	683 aa		13.98	□□□□□ -0.17
RBM28-208	ENST00000495327	MYO18A	Q92614	2054 aa	Known RBP	13.98	□□□□□ -0.17
RBM28-208	ENST00000495327	GPR179	Q6PRD1	2367 aa		13.97	□□□□□ -0.17
RBM28-208	ENST00000495327	PTPRZ1	P23471	2315 aa	Predicted RBP	13.97	□□□□□ -0.17
RBM28-208	ENST00000495327	CACNG3	O60359	315 aa		13.97	□□□□□ -0.17
RBM28-208	ENST00000495327	KAT7	O95251	611 aa		13.97	□□□□□ -0.17
RBM28-208	ENST00000495327	APOD	P05090	189 aa		13.97	□□□□□ -0.17
RBM28-208	ENST00000495327	KRT5	P13647	590 aa		13.97	□□□□□ -0.17
RBM28-208	ENST00000495327	SLC9A1	P19634	815 aa		13.97	□□□□□ -0.17
RBM28-208	ENST00000495327	GRIA2	P42262	883 aa		13.97	□□□□□ -0.17
RBM28-208	ENST00000495327	RPL34	P49207	117 aa	Known RBP	13.97	□□□□□ -0.17
RBM28-208	ENST00000495327	FNTB	P49356	437 aa		13.97	□□□□□ -0.17
RBM28-208	ENST00000495327	MRPS21	P82921	87 aa	Known RBP	13.97	□□□□□ -0.17
RBM28-208	ENST00000495327	HSF5	Q4G112	596 aa	Predicted RBP	13.97	□□□□□ -0.17
RBM28-208	ENST00000495327	BTBD8	Q5XKL5	378 aa		13.97	□□□□□ -0.17
RBM28-208	ENST00000495327	PMF1	Q6P1K2	205 aa		13.97	□□□□□ -0.17
RBM28-208	ENST00000495327	RSRC2	Q7L4I2	434 aa	Known RBP	13.97	□□□□□ -0.17
RBM28-208	ENST00000495327	TMEM25	Q86YD3	366 aa		13.97	□□□□□ -0.17
RBM28-208	ENST00000495327	CREBRF	Q8IUR6	639 aa		13.97	□□□□□ -0.17
RBM28-208	ENST00000495327	USP33	Q8TEY7	942 aa		13.97	□□□□□ -0.17
RBM28-208	ENST00000495327	PLD4	Q96BZ4	506 aa		13.97	□□□□□ -0.17
RBM28-208	ENST00000495327	DCLK3	Q9C098	648 aa		13.97	□□□□□ -0.17
RBM28-208	ENST00000495327	ARHGEF4	Q9NR80	690 aa		13.97	□□□□□ -0.17
RBM28-208	ENST00000495327	ABCC13	Q9NSE7	274 aa		13.97	□□□□□ -0.17
RBM28-208	ENST00000495327	MARCH2	Q9P0N8	246 aa		13.97	□□□□□ -0.17
RBM28-208	ENST00000495327	STRIP2	Q9ULQ0	834 aa		13.97	□□□□□ -0.17
RBM28-208	ENST00000495327	SPTBN4	Q9H254	2564 aa		13.97	□□□□□ -0.17
RBM28-208	ENST00000495327	RALGAPA1	Q6GYQ0	2036 aa		13.97	□□□□□ -0.17
RBM28-208	ENST00000495327	YJEFN3	A6XGL0	299 aa		13.96	□□□□□ -0.17
RBM28-208	ENST00000495327		E7ENQ6	273 aa		13.96	□□□□□ -0.17
RBM28-208	ENST00000495327	MED7	O43513	233 aa		13.96	□□□□□ -0.17
RBM28-208	ENST00000495327	TULP3	O75386	442 aa		13.96	□□□□□ -0.17
RBM28-208	ENST00000495327	FBXO21	O94952	628 aa		13.96	□□□□□ -0.17
RBM28-208	ENST00000495327	MBD3	O95983	291 aa		13.96	□□□□□ -0.17
RBM28-208	ENST00000495327	PON1	P27169	355 aa		13.96	□□□□□ -0.17
RBM28-208	ENST00000495327	GNA15	P30679	374 aa		13.96	□□□□□ -0.17
RBM28-208	ENST00000495327	GPD2	P43304	727 aa		13.96	□□□□□ -0.17
RBM28-208	ENST00000495327	TNFRSF4	P43489	277 aa		13.96	□□□□□ -0.17
RBM28-208	ENST00000495327	SLC6A11	P48066	632 aa		13.96	□□□□□ -0.17
RBM28-208	ENST00000495327	KDSR	Q06136	332 aa		13.96	□□□□□ -0.17
RBM28-208	ENST00000495327	MESP2	Q0VG99	397 aa		13.96	□□□□□ -0.17
RBM28-208	ENST00000495327	DMC1	Q14565	340 aa		13.96	□□□□□ -0.17
RBM28-208	ENST00000495327	ANO4	Q32M45	955 aa		13.96	□□□□□ -0.17
RBM28-208	ENST00000495327	VWA3B	Q502W6	1294 aa		13.96	□□□□□ -0.17
RBM28-208	ENST00000495327	MIIP	Q5JXC2	388 aa		13.96	□□□□□ -0.17
RBM28-208	ENST00000495327	MSANTD2	Q6P1R3	559 aa		13.96	□□□□□ -0.17
RBM28-208	ENST00000495327	GJB7	Q6PEY0	223 aa		13.96	□□□□□ -0.17
RBM28-208	ENST00000495327	TERB1	Q8NA31	727 aa		13.96	□□□□□ -0.17
RBM28-208	ENST00000495327	SHC3	Q92529	594 aa		13.96	□□□□□ -0.17
RBM28-208	ENST00000495327	XPO6	Q96QU8	1125 aa	Known RBP	13.96	□□□□□ -0.17
RBM28-208	ENST00000495327	TUBGCP2	Q9BSJ2	902 aa		13.96	□□□□□ -0.17
RBM28-208	ENST00000495327	NDST4	Q9H3R1	872 aa		13.96	□□□□□ -0.17
RBM28-208	ENST00000495327	SIX2	Q9NPC8	291 aa		13.96	□□□□□ -0.17
RBM28-208	ENST00000495327	WDR35	Q9P2L0	1181 aa		13.96	□□□□□ -0.17
RBM28-208	ENST00000495327	DEC1	Q9P2X7	70 aa		13.96	□□□□□ -0.17
RBM28-208	ENST00000495327	MMP17	Q9ULZ9	603 aa		13.96	□□□□□ -0.17
RBM28-208	ENST00000495327	HBS1L	Q9Y450	684 aa	Known RBP	13.96	□□□□□ -0.17
RBM28-208	ENST00000495327	BECN2	A8MW95	431 aa		13.95	□□□□□ -0.18
RBM28-208	ENST00000495327	NEDD8-MDP1	E9PL57	170 aa		13.95	□□□□□ -0.18
RBM28-208	ENST00000495327	GABBR2	O75899	941 aa		13.95	□□□□□ -0.18
RBM28-208	ENST00000495327	CALCA	P01258	141 aa		13.95	□□□□□ -0.18
RBM28-208	ENST00000495327	KLKB1	P03952	638 aa		13.95	□□□□□ -0.18
RBM28-208	ENST00000495327	LCP1	P13796	627 aa		13.95	□□□□□ -0.18
RBM28-208	ENST00000495327	TYR	P14679	529 aa		13.95	□□□□□ -0.18
RBM28-208	ENST00000495327	EEF1G	P26641	437 aa	Known RBP	13.95	□□□□□ -0.18
RBM28-208	ENST00000495327	CORO1A	P31146	461 aa	Known RBP	13.95	□□□□□ -0.18
RBM28-208	ENST00000495327	CHKA	P35790	457 aa		13.95	□□□□□ -0.18
RBM28-208	ENST00000495327	KIR2DL1	P43626	348 aa	Predicted RBP	13.95	□□□□□ -0.18
RBM28-208	ENST00000495327	RGS7	P49802	495 aa		13.95	□□□□□ -0.18
RBM28-208	ENST00000495327	TRIP4	Q15650	581 aa	Predicted RBP	13.95	□□□□□ -0.18
RBM28-208	ENST00000495327	BSPRY	Q5W0U4	402 aa		13.95	□□□□□ -0.18
RBM28-208	ENST00000495327	HEATR6	Q6AI08	1181 aa	Known RBP	13.95	□□□□□ -0.18
RBM28-208	ENST00000495327	LAIR1	Q6GTX8	287 aa		13.95	□□□□□ -0.18
RBM28-208	ENST00000495327	SFTPA1	Q8IWL2	248 aa		13.95	□□□□□ -0.18
RBM28-208	ENST00000495327	FAM217A	Q8IXS0	508 aa		13.95	□□□□□ -0.18
RBM28-208	ENST00000495327	ENOX1	Q8TC92	643 aa	Known RBP	13.95	□□□□□ -0.18
RBM28-208	ENST00000495327	KCNV2	Q8TDN2	545 aa		13.95	□□□□□ -0.18
RBM28-208	ENST00000495327	STK32A	Q8WU08	396 aa		13.95	□□□□□ -0.18
RBM28-208	ENST00000495327	RNF139	Q8WU17	664 aa		13.95	□□□□□ -0.18
RBM28-208	ENST00000495327	ZNF606	Q8WXB4	792 aa		13.95	□□□□□ -0.18
RBM28-208	ENST00000495327	NDRG1	Q92597	394 aa	Known RBP	13.95	□□□□□ -0.18
RBM28-208	ENST00000495327	HHIP	Q96QV1	700 aa		13.95	□□□□□ -0.18
RBM28-208	ENST00000495327	BBS2	Q9BXC9	721 aa		13.95	□□□□□ -0.18
RBM28-208	ENST00000495327	NCDN	Q9UBB6	729 aa		13.95	□□□□□ -0.18
RBM28-208	ENST00000495327	RAB23	Q9ULC3	237 aa		13.95	□□□□□ -0.18
RBM28-208	ENST00000495327	NFE2L3	Q9Y4A8	694 aa		13.95	□□□□□ -0.18
RBM28-208	ENST00000495327	DCHS1	Q96JQ0	3298 aa		13.95	□□□□□ -0.18
RBM28-208	ENST00000495327	SLC12A8	A0AV02	714 aa		13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms