RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 PCDH9Q9HC56 1237 aa16.27■□□□□ 0.19
SHISA5-216ENST00000494854 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.27■□□□□ 0.19
SHISA5-216ENST00000494854 CWC15Q9P013 229 aaKnown RBP16.27■□□□□ 0.19
SHISA5-216ENST00000494854 SAE1Q9UBE0 346 aaPredicted RBP16.27■□□□□ 0.19
SHISA5-216ENST00000494854 SLC12A6Q9UHW9 1150 aa16.27■□□□□ 0.19
SHISA5-216ENST00000494854 SMIM23A6NLE4 172 aa16.26■□□□□ 0.19
SHISA5-216ENST00000494854 C5orf67F2Z3F1 127 aa16.26■□□□□ 0.19
SHISA5-216ENST00000494854 RGS16O15492 202 aaPredicted RBP16.26■□□□□ 0.19
SHISA5-216ENST00000494854 PRPSAP2O60256 369 aa16.26■□□□□ 0.19
SHISA5-216ENST00000494854 ENDOD1O94919 500 aa16.26■□□□□ 0.19
SHISA5-216ENST00000494854 RB1P06400 928 aa16.26■□□□□ 0.19
SHISA5-216ENST00000494854 LINC00271P0C7V0 271 aa16.26■□□□□ 0.19
SHISA5-216ENST00000494854 SDC4P31431 198 aa16.26■□□□□ 0.19
SHISA5-216ENST00000494854 ATP11AP98196 1134 aa16.26■□□□□ 0.19
SHISA5-216ENST00000494854 GPS1Q13098 491 aa16.26■□□□□ 0.19
SHISA5-216ENST00000494854 CMTR2Q8IYT2 770 aaKnown RBP16.26■□□□□ 0.19
SHISA5-216ENST00000494854 ZCCHC9Q8N567 271 aaKnown RBP16.26■□□□□ 0.19
SHISA5-216ENST00000494854 TOP6BLQ8N6T0 577 aa16.26■□□□□ 0.19
SHISA5-216ENST00000494854 EPS8L3Q8TE67 593 aaKnown RBP16.26■□□□□ 0.19
SHISA5-216ENST00000494854 PPM1EQ8WY54 764 aa16.26■□□□□ 0.19
SHISA5-216ENST00000494854 ZFP42Q96MM3 310 aa16.26■□□□□ 0.19
SHISA5-216ENST00000494854 B3GNT5Q9BYG0 378 aa16.26■□□□□ 0.19
SHISA5-216ENST00000494854 ROPN1BQ9BZX4 212 aaPredicted RBP16.26■□□□□ 0.19
SHISA5-216ENST00000494854 ELAC1Q9H777 363 aaKnown RBP16.26■□□□□ 0.19
SHISA5-216ENST00000494854 ROPN1Q9HAT0 212 aaPredicted RBP16.26■□□□□ 0.19
SHISA5-216ENST00000494854 TPX2Q9ULW0 747 aaKnown RBP16.26■□□□□ 0.19
SHISA5-216ENST00000494854 H3BNC9 293 aa16.25■□□□□ 0.19
SHISA5-216ENST00000494854 APOC4-APOC2K7ER74 178 aa16.25■□□□□ 0.19
SHISA5-216ENST00000494854 RASGRF2O14827 1237 aa16.25■□□□□ 0.19
SHISA5-216ENST00000494854 APOC2P02655 101 aa16.25■□□□□ 0.19
SHISA5-216ENST00000494854 WARSP23381 471 aaKnown RBP16.25■□□□□ 0.19
SHISA5-216ENST00000494854 LSP1P33241 339 aa16.25■□□□□ 0.19
SHISA5-216ENST00000494854 CDH6P55285 790 aa16.25■□□□□ 0.19
SHISA5-216ENST00000494854 BTG3Q14201 252 aaPredicted RBP16.25■□□□□ 0.19
SHISA5-216ENST00000494854 CCDC85BQ15834 202 aaPredicted RBP16.25■□□□□ 0.19
SHISA5-216ENST00000494854 CEP128Q6ZU80 1094 aa16.25■□□□□ 0.19
SHISA5-216ENST00000494854 RELL1Q8IUW5 271 aa16.25■□□□□ 0.19
SHISA5-216ENST00000494854 BCAS4Q8TDM0 211 aa16.25■□□□□ 0.19
SHISA5-216ENST00000494854 GDPD5Q8WTR4 605 aa16.25■□□□□ 0.19
SHISA5-216ENST00000494854 FAM172AQ8WUF8 416 aa16.25■□□□□ 0.19
SHISA5-216ENST00000494854 TNIP3Q96KP6 325 aa16.25■□□□□ 0.19
SHISA5-216ENST00000494854 CYLDQ9NQC7 956 aa16.25■□□□□ 0.19
SHISA5-216ENST00000494854 FAM105AQ9NUU6 356 aa16.25■□□□□ 0.19
SHISA5-216ENST00000494854 NINJ2Q9NZG7 142 aa16.25■□□□□ 0.19
SHISA5-216ENST00000494854 IFNB1P01574 187 aa16.25■□□□□ 0.19
SHISA5-216ENST00000494854 DESP17661 470 aa16.25■□□□□ 0.19
SHISA5-216ENST00000494854 BMPR1AP36894 532 aa16.25■□□□□ 0.19
SHISA5-216ENST00000494854 RPL34P49207 117 aaKnown RBP16.25■□□□□ 0.19
SHISA5-216ENST00000494854 KYNUQ16719 465 aa16.25■□□□□ 0.19
SHISA5-216ENST00000494854 FOXR1Q6PIV2 292 aa16.25■□□□□ 0.19
SHISA5-216ENST00000494854 OSTM1Q86WC4 334 aa16.25■□□□□ 0.19
SHISA5-216ENST00000494854 SLC2A14Q8TDB8 520 aa16.25■□□□□ 0.19
SHISA5-216ENST00000494854 MAK16Q9BXY0 300 aaKnown RBP16.25■□□□□ 0.19
SHISA5-216ENST00000494854 NGRNQ9NPE2 291 aaKnown RBP16.25■□□□□ 0.19
SHISA5-216ENST00000494854 LRFN2Q9ULH4 789 aa16.25■□□□□ 0.19
SHISA5-216ENST00000494854 PCDHB7Q9Y5E2 793 aa16.25■□□□□ 0.19
SHISA5-216ENST00000494854 MEIS3P2A8K0S8 358 aa16.24■□□□□ 0.19
SHISA5-216ENST00000494854 NDC80O14777 642 aa16.24■□□□□ 0.19
SHISA5-216ENST00000494854 AGTP01019 485 aa16.24■□□□□ 0.19
SHISA5-216ENST00000494854 SLCO1A2P46721 670 aa16.24■□□□□ 0.19
SHISA5-216ENST00000494854 MMRN1Q13201 1228 aa16.24■□□□□ 0.19
SHISA5-216ENST00000494854 DPYSL3Q14195 570 aa16.24■□□□□ 0.19
SHISA5-216ENST00000494854 MORF4L2Q15014 288 aa16.24■□□□□ 0.19
SHISA5-216ENST00000494854 BOLA3Q53S33 107 aa16.24■□□□□ 0.19
SHISA5-216ENST00000494854 SCYL2Q6P3W7 929 aa16.24■□□□□ 0.19
SHISA5-216ENST00000494854 HACE1Q8IYU2 909 aa16.24■□□□□ 0.19
SHISA5-216ENST00000494854 B3GALNT2Q8NCR0 500 aa16.24■□□□□ 0.19
SHISA5-216ENST00000494854 ATXN2LQ8WWM7 1075 aaKnown RBP16.24■□□□□ 0.19
SHISA5-216ENST00000494854 RBM15Q96T37 977 aaKnown RBP eCLIP16.24■□□□□ 0.19
SHISA5-216ENST00000494854 NCAPGQ9BPX3 1015 aa16.24■□□□□ 0.19
SHISA5-216ENST00000494854 STMN4Q9H169 189 aaPredicted RBP16.24■□□□□ 0.19
SHISA5-216ENST00000494854 CHST12Q9NRB3 414 aa16.24■□□□□ 0.19
SHISA5-216ENST00000494854 TMEM161AQ9NX61 479 aa16.24■□□□□ 0.19
SHISA5-216ENST00000494854 FNDC1Q4ZHG4 1894 aaPredicted RBP16.24■□□□□ 0.19
SHISA5-216ENST00000494854 CYB561D2O14569 222 aa16.23■□□□□ 0.19
SHISA5-216ENST00000494854 PECAM1P16284 738 aaPredicted RBP16.23■□□□□ 0.19
SHISA5-216ENST00000494854 SCNN1AP37088 669 aa16.23■□□□□ 0.19
SHISA5-216ENST00000494854 ACADSBP45954 432 aa16.23■□□□□ 0.19
SHISA5-216ENST00000494854 GDF10P55107 478 aa16.23■□□□□ 0.19
SHISA5-216ENST00000494854 AUHQ13825 339 aaKnown RBP16.23■□□□□ 0.19
SHISA5-216ENST00000494854 KRT81Q14533 505 aa16.23■□□□□ 0.19
SHISA5-216ENST00000494854 RNASEH2BQ5TBB1 312 aaKnown RBP16.23■□□□□ 0.19
SHISA5-216ENST00000494854 SLC26A9Q7LBE3 791 aa16.23■□□□□ 0.19
SHISA5-216ENST00000494854 MAP7D3Q8IWC1 876 aa16.23■□□□□ 0.19
SHISA5-216ENST00000494854 GSTCDQ8NEC7 633 aa16.23■□□□□ 0.19
SHISA5-216ENST00000494854 CLEC4CQ8WTT0 213 aa16.23■□□□□ 0.19
SHISA5-216ENST00000494854 TEKT4Q8WW24 435 aa16.23■□□□□ 0.19
SHISA5-216ENST00000494854 HSFY1Q96LI6 401 aa16.23■□□□□ 0.19
SHISA5-216ENST00000494854 EPN3Q9H201 632 aa16.23■□□□□ 0.19
SHISA5-216ENST00000494854 RABEP2Q9H5N1 569 aa16.23■□□□□ 0.19
SHISA5-216ENST00000494854 CNOT10Q9H9A5 744 aaKnown RBP16.23■□□□□ 0.19
SHISA5-216ENST00000494854 SLC38A7Q9NVC3 462 aa16.23■□□□□ 0.19
SHISA5-216ENST00000494854 THEGQ9P2T0 379 aa16.23■□□□□ 0.19
SHISA5-216ENST00000494854 MCF2LO15068 1137 aa16.23■□□□□ 0.19
SHISA5-216ENST00000494854 LCP1P13796 627 aa16.23■□□□□ 0.19
SHISA5-216ENST00000494854 MLH1P40692 756 aa16.23■□□□□ 0.19
SHISA5-216ENST00000494854 EIF3EP60228 445 aaKnown RBP16.23■□□□□ 0.19
SHISA5-216ENST00000494854 GPM6BQ13491 265 aa16.23■□□□□ 0.19
SHISA5-216ENST00000494854 TFDP2Q14188 446 aa16.23■□□□□ 0.19
SHISA5-216ENST00000494854 PDK2Q15119 407 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms